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Table view (355 sequence regions)

Original order	Download FASTA	Accession	Bit score	Type	Start	End	Description	Species	View context
0		URS0001A242EB_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
1		URS0001A244D8_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
2		URS0001A236FD_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
3		URS0001A24581_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
4		URS0001A23A9B_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
5		URS0001A23FFD_12908	N/A	seed	1	97	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
6		URS0001A23E41_519442	N/A	seed	1	94	Halorhabdus utahensis DSM 12940 S15-Halobacteria ribosomal protein leader	Halorhabdus utahensis DSM 12940
7		URS0001A23F9F_12908	N/A	seed	1	64	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
8		URS0001A2378F_12908	N/A	seed	1	99	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
9		URS0001A242D6_1033806	N/A	seed	1	96	Halorhabdus tiamatea SARL4B S15-Halobacteria ribosomal protein leader	Halorhabdus tiamatea SARL4B
10		URS0001A235EF_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
11		URS0001A23CE4_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
12		URS0001A23A15_12908	N/A	seed	1	86	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
13		URS0001A23812_12908	N/A	seed	1	99	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
14		URS0001A23880_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
15		URS0001A231C6_12908	N/A	seed	1	62	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
16		URS0001A24057_1261545	N/A	seed	1	66	Halarchaeum acidiphilum MH1-52-1 S15-Halobacteria ribosomal protein leader	Halarchaeum acidiphilum MH1-52-1
17		URS0001A23DAF_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
18		URS0001A24016_1210908	N/A	seed	1	64	Halogranum salarium B-1 S15-Halobacteria ribosomal protein leader	Halogranum salarium B-1
19		URS0001A23804_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
20		URS0001A244BE_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
21		URS0001A248C4_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
22		URS0001A248C4_1230455	N/A	seed	1	71	Halorubrum arcis JCM 13916 S15-Halobacteria ribosomal protein leader	Halorubrum arcis JCM 13916
23		URS0001A248C4_1194088	N/A	seed	1	71	Halorubrum sp. T3 S15-Halobacteria ribosomal protein leader	Halorubrum sp. T3
24		URS0001A248C4_1227468	N/A	seed	1	71	Halorubrum distributum JCM 10118 S15-Halobacteria ribosomal protein leader	Halorubrum distributum JCM 10118
25		URS0001A248C4_1227483	N/A	seed	1	71	Halorubrum litoreum JCM 13561 S15-Halobacteria ribosomal protein leader	Halorubrum litoreum JCM 13561
26		URS0001A240CF_2248	N/A	seed	1	71	Halorubrum saccharovorum S15-Halobacteria ribosomal protein leader	Halorubrum saccharovorum
27		URS0001A240CF_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
28		URS0001A240CF_413816	N/A	seed	1	71	Halorubrum halophilum S15-Halobacteria ribosomal protein leader	Halorubrum halophilum
29		URS0001A240CF_1230456	N/A	seed	1	71	Halorubrum kocurii JCM 14978 S15-Halobacteria ribosomal protein leader	Halorubrum kocurii JCM 14978
30		URS0001A23D0C_12908	N/A	seed	1	72	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
31		URS0001A24A3A_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
32		URS0001A2451D_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
33		URS0001A241DE_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
34		URS0001A245F6_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
35		URS0001A24637_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
36		URS0001A23960_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
37		URS0001A23CDB_12908	N/A	seed	1	69	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
38		URS0001A246BB_12908	N/A	seed	1	72	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
39		URS0001A23349_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
40		URS0001A238F9_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
41		URS0001A233A6_12908	N/A	seed	1	72	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
42		URS0001A23C38_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
43		URS0001A23907_1498500	N/A	seed	1	71	Halorubrum sp. BV1 S15-Halobacteria ribosomal protein leader	Halorubrum sp. BV1
44		URS0001A241EA_1227465	N/A	seed	1	71	Halorubrum californiensis DSM 19288 S15-Halobacteria ribosomal protein leader	Halorubrum californiensis DSM 19288
45		URS0001A24ACC_1227482	N/A	seed	1	71	Halorubrum lipolyticum DSM 21995 S15-Halobacteria ribosomal protein leader	Halorubrum lipolyticum DSM 21995
46		URS0001A23202_1227485	N/A	seed	1	72	Halorubrum tebenquichense DSM 14210 S15-Halobacteria ribosomal protein leader	Halorubrum tebenquichense DSM 14210
47		URS0001A23202_1227481	N/A	seed	1	72	Halorubrum hochstenium ATCC 700873 S15-Halobacteria ribosomal protein leader	Halorubrum hochstenium ATCC 700873
48		URS0001A2350C_1227484	N/A	seed	1	71	Halorubrum saccharovorum DSM 1137 S15-Halobacteria ribosomal protein leader	Halorubrum saccharovorum DSM 1137
49		URS0001A23971_1227466	N/A	seed	1	71	Halorubrum coriense DSM 10284 S15-Halobacteria ribosomal protein leader	Halorubrum coriense DSM 10284
50		URS0001A2437E_1230454	N/A	seed	1	72	Halorubrum aidingense JCM 13560 S15-Halobacteria ribosomal protein leader	Halorubrum aidingense JCM 13560
51		URS0001A24703_12908	N/A	seed	1	72	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
52		URS0001A248DF_12908	N/A	seed	1	72	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
53		URS0001A24795_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
54		URS0001A23A22_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
55		URS0001A245E0_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
56		URS0001A24A41_797209	N/A	seed	1	67	Haladaptatus paucihalophilus DX253 S15-Halobacteria ribosomal protein leader	Haladaptatus paucihalophilus DX253
57		URS0001A23A25_1455608	N/A	seed	1	110	Haladaptatus cibarius D43 S15-Halobacteria ribosomal protein leader	Haladaptatus cibarius D43
58		URS0001A24434_12908	N/A	seed	1	69	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
59		URS0001A238F3_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
60		URS0001A235EE_12908	N/A	seed	1	56	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
61		URS0001A23F2D_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
62		URS0001A235FF_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
63		URS0001A235C8_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
64		URS0001A2471E_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
65		URS0001A246F9_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
66		URS0001A23D8B_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
67		URS0001A24159_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
68		URS0001A24276_1227460	N/A	seed	1	61	Haloferax larsenii JCM 13917 S15-Halobacteria ribosomal protein leader	Haloferax larsenii JCM 13917
69		URS0001A23A27_1508454	N/A	seed	1	61	Haloferax sp. ATB1 S15-Halobacteria ribosomal protein leader	Haloferax sp. ATB1
70		URS0001A23A27_1227464	N/A	seed	1	61	Haloferax sp. ATCC BAA-646 S15-Halobacteria ribosomal protein leader	Haloferax sp. ATCC BAA-646
71		URS0001A23D27_523841	N/A	seed	1	64	Haloferax mediterranei ATCC 33500 S15-Halobacteria ribosomal protein leader	Haloferax mediterranei ATCC 33500
72		URS0001A2356E_1230453	N/A	seed	1	61	Haloferax elongans ATCC BAA-1513 S15-Halobacteria ribosomal protein leader	Haloferax elongans ATCC BAA-1513
73		URS0001A23A93_309800	N/A	seed	1	61	Haloferax volcanii DS2 S15-Halobacteria ribosomal protein leader	Haloferax volcanii DS2
74		URS0001A23A93_662480	N/A	seed	1	61	Haloferax sulfurifontis ATCC BAA-897 S15-Halobacteria ribosomal protein leader	Haloferax sulfurifontis ATCC BAA-897
75		URS0001A24688_662478	N/A	seed	1	61	Haloferax denitrificans ATCC 35960 S15-Halobacteria ribosomal protein leader	Haloferax denitrificans ATCC 35960
76		URS0001A24688_1227461	N/A	seed	1	61	Haloferax prahovense DSM 18310 S15-Halobacteria ribosomal protein leader	Haloferax prahovense DSM 18310
77		URS0001A24688_1227459	N/A	seed	1	61	Haloferax gibbonsii ATCC 33959 S15-Halobacteria ribosomal protein leader	Haloferax gibbonsii ATCC 33959
78		URS0001A24688_114529	N/A	seed	1	61	Haloferax alexandrinus S15-Halobacteria ribosomal protein leader	Haloferax alexandrinus
79		URS0001A24688_35746	N/A	seed	1	61	Haloferax gibbonsii S15-Halobacteria ribosomal protein leader	Haloferax gibbonsii
80		URS0001A236B5_662479	N/A	seed	1	64	Haloferax mucosum ATCC BAA-1512 S15-Halobacteria ribosomal protein leader	Haloferax mucosum ATCC BAA-1512
81		URS0001A231E2_12908	N/A	seed	1	65	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
82		URS0001A23994_12908	N/A	seed	1	72	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
83		URS0001A23592_12908	N/A	seed	1	86	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
84		URS0001A23369_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
85		URS0001A2338E_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
86		URS0001A24179_12908	N/A	seed	1	69	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
87		URS0001A2338B_1227490	N/A	seed	1	92	Halovivax asiaticus JCM 14624 S15-Halobacteria ribosomal protein leader	Halovivax asiaticus JCM 14624
88		URS0001A24AD5_12908	N/A	seed	1	75	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
89		URS0001A23F9B_1071085	N/A	seed	1	69	haloarchaeon 3A1-DGR S15-Halobacteria ribosomal protein leader	haloarchaeon 3A1_DGR
90		URS0001A247D8_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
91		URS0001A232E4_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
92		URS0001A232D1_1069082	N/A	seed	1	67	Halomicrobium katesii DSM 19301 S15-Halobacteria ribosomal protein leader	Halomicrobium katesii DSM 19301
93		URS0001A232D1_485914	N/A	seed	1	67	Halomicrobium mukohataei DSM 12286 S15-Halobacteria ribosomal protein leader	Halomicrobium mukohataei DSM 12286
94		URS0001A24679_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
95		URS0001A24347_1227452	N/A	seed	1	66	Haloarcula amylolytica JCM 13557 S15-Halobacteria ribosomal protein leader	Haloarcula amylolytica JCM 13557
96		URS0001A238B4_662477	N/A	seed	1	66	Haloarcula vallismortis ATCC 29715 S15-Halobacteria ribosomal protein leader	Haloarcula vallismortis ATCC 29715
97		URS0001A2441D_1227453	N/A	seed	1	66	Haloarcula japonica DSM 6131 S15-Halobacteria ribosomal protein leader	Haloarcula japonica DSM 6131
98		URS0001A2441D_272569	N/A	seed	1	66	Haloarcula marismortui ATCC 43049 S15-Halobacteria ribosomal protein leader	Haloarcula marismortui ATCC 43049
99		URS0001A2441D_575195	N/A	seed	1	66	Haloarcula salaria S15-Halobacteria ribosomal protein leader	Haloarcula salaria
100		URS0001A2441D_662475	N/A	seed	1	66	Haloarcula californiae ATCC 33799 S15-Halobacteria ribosomal protein leader	Haloarcula californiae ATCC 33799
101		URS0001A2441D_662476	N/A	seed	1	66	Haloarcula sinaiiensis ATCC 33800 S15-Halobacteria ribosomal protein leader	Haloarcula sinaiiensis ATCC 33800
102		URS0001A2363A_1230451	N/A	seed	1	66	Haloarcula argentinensis DSM 12282 S15-Halobacteria ribosomal protein leader	Haloarcula argentinensis DSM 12282
103		URS0001A23228_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
104		URS0001A24A2A_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
105		URS0001A2323F_12908	N/A	seed	1	64	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
106		URS0001A23C59_12908	N/A	seed	1	64	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
107		URS0001A23497_12908	N/A	seed	1	64	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
108		URS0001A23E99_12908	N/A	seed	1	85	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
109		URS0001A24513_797114	N/A	seed	1	66	Halosimplex carlsbadense 2-9-1 S15-Halobacteria ribosomal protein leader	Halosimplex carlsbadense 2-9-1
110		URS0001A239AE_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
111		URS0001A24341_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
112		URS0001A233FD_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
113		URS0001A234D4_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
114		URS0001A245F3_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
115		URS0001A24599_1457250	N/A	seed	1	67	Halapricum salinum S15-Halobacteria ribosomal protein leader	Halapricum salinum
116		URS0001A2396B_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
117		URS0001A24784_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
118		URS0001A238D2_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
119		URS0001A24248_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
120		URS0001A241DD_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
121		URS0001A23E3F_12908	N/A	seed	1	65	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
122		URS0001A23F30_12908	N/A	seed	1	65	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
123		URS0001A247FB_12908	N/A	seed	1	65	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
124		URS0001A239BF_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
125		URS0001A23D43_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
126		URS0001A249BC_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
127		URS0001A23EB4_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
128		URS0001A24875_12908	N/A	seed	1	59	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
129		URS0001A2424F_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
130		URS0001A24A17_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
131		URS0001A23ADC_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
132		URS0001A2366C_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
133		URS0001A24850_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
134		URS0001A23F46_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
135		URS0001A23C9C_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
136		URS0001A2469F_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
137		URS0001A23E43_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
138		URS0001A2386F_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
139		URS0001A24575_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
140		URS0001A2491F_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
141		URS0001A244E2_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
142		URS0001A24075_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
143		URS0001A24650_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
144		URS0001A23743_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
145		URS0001A241FB_1324957	N/A	seed	1	67	Candidatus Halobonum tyrrellensis G22 S15-Halobacteria ribosomal protein leader	Candidatus Halobonum tyrrellensis G22
146		URS0001A244B2_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
147		URS0001A24A9F_12908	N/A	seed	1	69	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
148		URS0001A2357B_1230460	N/A	seed	1	71	Natronorubrum sulfidifaciens JCM 14089 S15-Halobacteria ribosomal protein leader	Natronorubrum sulfidifaciens JCM 14089
149		URS0001A23C4C_358396	N/A	seed	1	71	Halobiforma lacisalsi AJ5 S15-Halobacteria ribosomal protein leader	Halobiforma lacisalsi AJ5
150		URS0001A23833_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
151		URS0001A23366_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
152		URS0001A23B38_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
153		URS0001A243CB_797210	N/A	seed	1	74	Halopiger xanaduensis SH-6 S15-Halobacteria ribosomal protein leader	Halopiger xanaduensis SH-6
154		URS0001A23A90_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
155		URS0001A240B2_12908	N/A	seed	1	68	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
156		URS0001A243DA_797304	N/A	seed	1	65	Natronobacterium gregoryi SP2 S15-Halobacteria ribosomal protein leader	Natronobacterium gregoryi SP2
157		URS0001A23354_12908	N/A	seed	1	74	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
158		URS0001A233CF_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
159		URS0001A2388C_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
160		URS0001A2327F_1293047	N/A	seed	1	71	Halopiger djelfimassiliensis S15-Halobacteria ribosomal protein leader	Halopiger djelfimassiliensis
161		URS0001A249CC_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
162		URS0001A23FC9_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
163		URS0001A2379B_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
164		URS0001A23849_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
165		URS0001A23485_12908	N/A	seed	1	64	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
166		URS0001A23ADA_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
167		URS0001A2490C_12908	N/A	seed	1	67	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
168		URS0001A242C6_1293048	N/A	seed	1	70	Halopiger goleimassiliensis S15-Halobacteria ribosomal protein leader	Halopiger goleimassiliensis
169		URS0001A24897_1227495	N/A	seed	1	71	Natrinema pallidum DSM 3751 S15-Halobacteria ribosomal protein leader	Natrinema pallidum DSM 3751
170		URS0001A238DC_1230459	N/A	seed	1	71	Natrinema gari JCM 14663 S15-Halobacteria ribosomal protein leader	Natrinema gari JCM 14663
171		URS0001A238DC_1172566	N/A	seed	1	71	Natrinema sp. J7-1 S15-Halobacteria ribosomal protein leader	Natrinema sp. J7-1
172		URS0001A23654_222984	N/A	seed	1	71	Natrinema altunense S15-Halobacteria ribosomal protein leader	Natrinema altunense
173		URS0001A2479D_12908	N/A	seed	1	71	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
174		URS0001A2428B_1230457	N/A	seed	1	72	Haloterrigena limicola JCM 13563 S15-Halobacteria ribosomal protein leader	Haloterrigena limicola JCM 13563
175		URS0001A245FE_1227496	N/A	seed	1	71	Natrinema versiforme JCM 10478 S15-Halobacteria ribosomal protein leader	Natrinema versiforme JCM 10478
176		URS0001A2489C_797303	N/A	seed	1	71	Natrinema pellirubrum DSM 15624 S15-Halobacteria ribosomal protein leader	Natrinema pellirubrum DSM 15624
177		URS0001A24071_1455609	N/A	seed	1	71	Haloterrigena jeotgali A29 S15-Halobacteria ribosomal protein leader	Haloterrigena jeotgali A29
178		URS0001A24071_1227489	N/A	seed	1	71	Haloterrigena thermotolerans DSM 11552 S15-Halobacteria ribosomal protein leader	Haloterrigena thermotolerans DSM 11522
179		URS0001A24645_1227498	N/A	seed	1	71	Natronococcus jeotgali DSM 18795 S15-Halobacteria ribosomal protein leader	Natronococcus jeotgali DSM 18795
180		URS0001A2372F_12908	N/A	seed	1	70	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
181		URS0001A249F5_694430	N/A	seed	1	70	Natronococcus occultus SP4 S15-Halobacteria ribosomal protein leader	Natronococcus occultus SP4
182		URS0001A249F5_1227497	N/A	seed	1	70	Natronococcus amylolyticus DSM 10524 S15-Halobacteria ribosomal protein leader	Natronococcus amylolyticus DSM 10524
183		URS0001A2422D_1227493	N/A	seed	1	67	Natrialba hulunbeirensis JCM 10989 S15-Halobacteria ribosomal protein leader	Natrialba hulunbeirensis JCM 10989
184		URS0001A2422D_547559	N/A	seed	1	67	Natrialba magadii ATCC 43099 S15-Halobacteria ribosomal protein leader	Natrialba magadii ATCC 43099
185		URS0001A23462_1230458	N/A	seed	1	67	Natrialba taiwanensis DSM 12281 S15-Halobacteria ribosomal protein leader	Natrialba taiwanensis DSM 12281
186		URS0001A23462_29540	N/A	seed	1	67	Natrialba asiatica DSM 12278 S15-Halobacteria ribosomal protein leader	Natrialba asiatica DSM 12278
187		URS0001A2415A_1227492	N/A	seed	1	67	Natrialba chahannaoensis JCM 10990 S15-Halobacteria ribosomal protein leader	Natrialba chahannaoensis JCM 10990
188		URS0001A232F3_1227491	N/A	seed	1	71	Natrialba aegyptia DSM 13077 S15-Halobacteria ribosomal protein leader	Natrialba aegyptia DSM 13077
189		URS0001A23A36_1227500	N/A	seed	1	71	Natronorubrum bangense JCM 10635 S15-Halobacteria ribosomal protein leader	Natronorubrum bangense JCM 10635
190		URS0001A23504_1227499	N/A	seed	1	71	Natronolimnohabitans innermongolicus JCM 12255 S15-Halobacteria ribosomal protein leader	Natronolimnobius innermongolicus JCM 12255
191		URS0001A23F23_1227454	N/A	seed	1	71	Halobiforma nitratireducens JCM 10879 S15-Halobacteria ribosomal protein leader	Halobiforma nitratireducens JCM 10879
192		URS0001A23FAC_1227488	N/A	seed	1	71	Haloterrigena salina JCM 13891 S15-Halobacteria ribosomal protein leader	Haloterrigena salina JCM 13891
193		URS0001A23FAC_543526	N/A	seed	1	71	Haloterrigena turkmenica DSM 5511 S15-Halobacteria ribosomal protein leader	Haloterrigena turkmenica DSM 5511
194		URS0001A24729_1202768	N/A	seed	1	71	Halopiger salifodinae S15-Halobacteria ribosomal protein leader	Halopiger salifodinae
195		URS0001A232E3_1114856	N/A	seed	1	71	Natronorubrum tibetense GA33 S15-Halobacteria ribosomal protein leader	Natronorubrum tibetense GA33
196		URS0001A245C3_12908	N/A	seed	1	64	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
197		URS0001A23DDB_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
198		URS0001A23B24_12908	N/A	seed	1	63	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
199		URS0001A2321F_12908	N/A	seed	1	62	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
200		URS0001A240C7_1227487	N/A	seed	1	65	Halogeometricum pallidum JCM 14848 S15-Halobacteria ribosomal protein leader	Halogeometricum pallidum JCM 14848
201		URS0001A242D9_1448860	N/A	seed	1	63	Halobellus rufus S15-Halobacteria ribosomal protein leader	Halobellus rufus
202		URS0001A24849_469382	N/A	seed	1	66	Halogeometricum borinquense DSM 11551 S15-Halobacteria ribosomal protein leader	Halogeometricum borinquense DSM 11551
203		URS0001A237C8_1333523	N/A	seed	1	91	Salinarchaeum sp. Harcht-Bsk1 S15-Halobacteria ribosomal protein leader	Salinarchaeum sp. Harcht-Bsk1
204		URS0001A23E10_795797	N/A	seed	1	129	Halalkalicoccus jeotgali B3 S15-Halobacteria ribosomal protein leader	Halalkalicoccus jeotgali B3
205		URS0001A2368E_12908	N/A	seed	1	60	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
206		URS0001A23CC0_12908	N/A	seed	1	58	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
207		URS0001A231DC_926690	N/A	seed	1	58	Haloplanus natans DSM 17983 S15-Halobacteria ribosomal protein leader	Haloplanus natans DSM 17983
208		URS0001A23E66_12908	N/A	seed	1	59	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
209		URS0001A23885_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
210		URS0001A23F7A_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
211		URS0001A233D8_348780	N/A	seed	1	66	Natronomonas pharaonis DSM 2160 S15-Halobacteria ribosomal protein leader	Natronomonas pharaonis DSM 2160
212		URS0001A23475_268739	N/A	seed	1	66	Natronomonas moolapensis 8.8.11 S15-Halobacteria ribosomal protein leader	Natronomonas moolapensis 8.8.11
213		URS0001A246F5_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
214		URS0001A24A01_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
215		URS0001A23B80_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
216		URS0001A23B30_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
217		URS0001A2395B_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
218		URS0001A2436A_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
219		URS0001A23412_1495067	N/A	seed	1	72	Halostagnicola sp. A56 S15-Halobacteria ribosomal protein leader	Halostagnicola sp. A56
220		URS0001A23412_797299	N/A	seed	1	72	Halostagnicola larsenii XH-48 S15-Halobacteria ribosomal protein leader	Halostagnicola larsenii XH-48
221		URS0001A23346_12908	N/A	seed	1	77	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
222		URS0001A24798_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
223		URS0001A23E38_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
224		URS0001A2411A_12908	N/A	seed	1	66	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
225		URS0001A23662_1604004	N/A	seed	1	64	Halanaeroarchaeum sulfurireducens S15-Halobacteria ribosomal protein leader	Halanaeroarchaeum sulfurireducens
226		URS0001A247DB_1132509	N/A	seed	1	63	Halococcus hamelinensis 100A6 S15-Halobacteria ribosomal protein leader	Halococcus hamelinensis 100A6
227		URS0001A23EDD_1380430	N/A	seed	1	65	Halolamina rubra S15-Halobacteria ribosomal protein leader	Halolamina rubra
228		URS0001A23AAC_12908	N/A	seed	1	61	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
229		URS0001A23CD2_1227456	N/A	seed	1	61	Halococcus salifodinae DSM 8989 S15-Halobacteria ribosomal protein leader	Halococcus salifodinae DSM 8989
230		URS0001A23D67_1232219	N/A	seed	1	61	Halococcus agarilyticus S15-Halobacteria ribosomal protein leader	Halococcus agarilyticus
231		URS0001A23343_1227455	N/A	seed	1	61	Halococcus saccharolyticus DSM 5350 S15-Halobacteria ribosomal protein leader	Halococcus saccharolyticus DSM 5350
232		URS0001A24423_1264579	N/A	seed	1	61	Halococcus sediminicola S15-Halobacteria ribosomal protein leader	Halococcus sediminicola
233		URS0001A24647_1227457	N/A	seed	1	61	Halococcus thailandensis JCM 13552 S15-Halobacteria ribosomal protein leader	Halococcus thailandensis JCM 13552
234		URS0001A247E5_931277	N/A	seed	1	61	Halococcus morrhuae DSM 1307 S15-Halobacteria ribosomal protein leader	Halococcus morrhuae DSM 1307
235		URS0001A249DE_12908	N/A	seed	1	75	unclassified sequences S15-Halobacteria ribosomal protein leader	unclassified sequences
236		URS0001A23B3A_64091	N/A	seed	1	66	Halobacterium salinarum NRC-1 S15-Halobacteria ribosomal protein leader	Halobacterium sp. NRC-1
0		HF582854.1	88.50	full	1,095,664	1,095,729	Natronomonas moolapensis 8.8.11 complete genome	Natronomonas moolapensis 8.8.11
1		CR936257.1	87.60	full	1,546,623	1,546,688	Natronomonas pharaonis DSM 2160 complete genome	Natronomonas pharaonis DSM 2160
2		CP001690.1	87.50	full	2,001,059	2,001,124	Halogeometricum borinquense DSM 11551, complete genome.	Halogeometricum borinquense DSM 11551
3		JAHLKM010000003.1	84.80	full	61,547	61,612	JAHLKM010000003.1 Natronomonas aquatica strain F2-12 NODE_3_length_185701_cov_227.399851, whole genome shotgun sequence	Natronomonas aquatica
4		WPCC01000050.1	84.60	full	4,745	4,680	WPCC01000050.1 Natronomonas sp. CBA1123 contig62, whole genome shotgun sequence	Natronomonas sp. CBA1123
5		JAAOHU010000005.1	84.40	full	79,775	79,840	JAAOHU010000005.1 Halostella sp. JP-L12 Scaffold5_1, whole genome shotgun sequence	Halostella sp. JP-L12
6		FNIA01000008.1	84.10	full	131,511	131,446	FNIA01000008.1 Haloarchaeobius iranensis strain EB21,IBRC-M 10013,KCTC 4048 genome assembly, contig: Ga0075265_108, whole genome shotgun sequence	Halobacteriaceae archaeon EB21
7		QKNX01000002.1	82.20	full	513,034	513,099	QKNX01000002.1 Natronomonas salsuginis strain F20-122 NODE_2_length_675769_cov_15.592506, whole genome shotgun sequence	Natronomonas salsuginis
8		FNVN01000002.1	82.10	full	503,431	503,494	FNVN01000002.1 Halobellus limi strain CGMCC 1.10331 genome assembly, contig: Ga0070554_102, whole genome shotgun sequence	Halobacteriaceae archaeon TBN53
9		QMDX01000013.1	81.70	full	1,937	2,002	QMDX01000013.1 Haloglomus irregulare strain F16-60 NODE_13_length_100701_cov_210.59, whole genome shotgun sequence	Haloglomus irregulare
10		FOOQ01000001.1	81.40	full	1,065,358	1,065,294	FOOQ01000001.1 Halopelagius inordinatus strain CGMCC 1.7739 genome assembly, contig: Ga0070189_101, whole genome shotgun sequence	Halopelagius inordinatus
11		CP064786.1	81.30	full	1,951,168	1,951,233	CP064786.1 Natranaeroarchaeum sulfidigenes strain AArc-S chromosome, complete genome	Natranaeroarchaeum sulfidigenes
12		CP054707.1	80.10	full	1,530,861	1,530,796	CP054707.1 Halarchaeum sp. CBA1220 chromosome, complete genome	Halarchaeum sp. CBA1220
13		BATA01000023.1	80.00	full	18,137	18,202	Halarchaeum acidiphilum MH1-52-1 DNA, contig: HAL023.	Halarchaeum acidiphilum MH1-52-1
14		RKLQ01000001.1	79.40	full	1,567,168	1,567,103	RKLQ01000001.1 Halomicroarcula salinisoli strain F24A NODE_1_length_1732736_cov_36.527791, whole genome shotgun sequence	Halomicroarcula salinisoli
15		CP003929.1	79.30	full	817,241	817,172	Natronococcus occultus SP4, complete genome.	Natronococcus occultus SP4
16		BMOC01000011.1	79.00	full	28,884	28,821	BMOC01000011.1 Halobellus salinus JCM 14359 DNA, sequence11, whole genome shotgun sequence	Halobacteriaceae archaeon CSW2.24.4
17		PHNJ01000001.1	79.00	full	500,207	500,138	PHNJ01000001.1 Natronococcus pandeyae strain LS1_42 NODE_1_length_730915_cov_304.284, whole genome shotgun sequence	Natronococcus pandeyae
18		WPCD01000175.1	79.00	full	7,195	7,257	WPCD01000175.1 Halogeometricum sp. CBA1124 contig252, whole genome shotgun sequence	Halogeometricum sp. CBA1124
19		QXIJ01000001.1	78.80	full	292,553	292,617	QXIJ01000001.1 Halobellus sp. Atlit-38R P_contig000001, whole genome shotgun sequence	Halobellus sp. Atlit-38R
20		REFY01000003.1	78.60	full	417,107	417,176	REFY01000003.1 Natrarchaeobius halalkaliphilus strain AArcht-Sl Ga0101036_103, whole genome shotgun sequence	Natrarchaeobius halalkaliphilus
21		BMOU01000004.1	78.50	full	189,076	189,141	BMOU01000004.1 Halomicroarcula pellucida JCM 17820 DNA, sequence04, whole genome shotgun sequence	Halomicroarcula pellucida
22		AOIO01000033.1	78.40	full	16,936	16,870	Natrialba asiatica DSM 12278 contig_33, whole genome shotgun sequence.	Natrialba asiatica DSM 12278
23		AM180088.1	78.30	full	1,604,179	1,604,116	Haloquadratum walsbyi DSM 16790 complete genome	Haloquadratum walsbyi
24		FOIS01000002.1	77.90	full	637,723	637,653	Halopiger salifodinae strain CGMCC 1.12284 genome assembly, contig: Ga0079850_12	Halopiger salifodinae
25		BMOO01000003.1	77.80	full	376,386	376,321	BMOO01000003.1 Halarchaeum rubridurum JCM 16108 DNA, sequence03, whole genome shotgun sequence	halophilic archaeon MH1-16-3
26		FNPB01000008.1	77.80	full	44,356	44,418	FNPB01000008.1 Halobellus clavatus strain CGMCC 1.10118 genome assembly, contig: Ga0070201_108, whole genome shotgun sequence	Halobellus clavatus
27		AOLZ01000028.1	77.70	full	17,401	17,471	Halobiforma lacisalsi AJ5 contig_28, whole genome shotgun sequence.	Halobiforma lacisalsi AJ5
28		CP039833.1	77.50	full	2,452,580	2,452,648	CP039833.1 Haloprofundus sp. MHR1 chromosome, complete genome	Haloprofundus sp. MHR1
29		AY596297.1	77.40	full	1,271,347	1,271,412	Haloarcula marismortui ATCC 43049 chromosome I, complete sequence.	Haloarcula marismortui ATCC 43049
30		CP001932.1	77.30	full	2,453,487	2,453,553	Natrialba magadii ATCC 43099, complete genome.	Natrialba magadii ATCC 43099
31		JAAOIR010000001.1	77.10	full	91,132	91,199	JAAOIR010000001.1 Halorubellus sp. JP-L1 Scaffold1, whole genome shotgun sequence	Halorubellus sp. JP-L1
32		VTAW01000004.1	77.10	full	78,890	78,821	VTAW01000004.1 Natrialba swarupiae strain ESP3B_9 NODE_4_length_193345_cov_82.9251, whole genome shotgun sequence	Natrialba swarupiae
33		OBEJ01000002.1	77.10	full	698,994	698,928	OBEJ01000002.1 Natronoarchaeum philippinense strain DSM 27208 genome assembly, contig: Ga0170390_102, whole genome shotgun sequence	halophilic archaeon 294-194-5
34		AOMA01000110.1	76.90	full	847	917	Halobiforma nitratireducens JCM 10879 contig_110, whole genome shotgun sequence.	Halobiforma nitratireducens JCM 10879
35		LWLN01000001.1	76.80	full	2,180,117	2,180,187	LWLN01000001.1 Natrinema saccharevitans strain AB14 Htg_sac_contig1, whole genome shotgun sequence	Haloterrigena saccharevitans
36		CP104003.1	76.70	full	506,855	506,919	CP104003.1 Salinirubellus salinus strain ZS-35-S2 chromosome, complete genome	Salinirubellus salinus
37		AOIS01000067.1	76.30	full	104,689	104,619	AOIS01000067.1 Haloterrigena salina JCM 13891 contig_67, whole genome shotgun sequence	Haloterrigena salina JCM 13891
38		FOYS01000002.1	76.30	full	386,744	386,806	FOYS01000002.1 Halogeometricum limi strain CGMCC 1.8711 genome assembly, contig: Ga0070547_12, whole genome shotgun sequence	Halosarcina limi
39		CP008874.1	76.20	full	1,124,695	1,124,758	Halanaeroarchaeum sulfurireducens strain HSR2, complete genome.	Halanaeroarchaeum sulfurireducens
40		CP027033.1	76.00	full	1,487,255	1,487,185	CP027033.1 Natrarchaeobaculum sulfurireducens strain AArc-Mg chromosome, complete genome	Natrarchaeobaculum sulfurireducens
41		FOZK01000001.1	76.00	full	1,605,443	1,605,509	FOZK01000001.1 Halomicrobium zhouii strain CGMCC 1.10457 genome assembly, contig: Ga0079826_11, whole genome shotgun sequence	Halomicrobium zhouii
42		AOHZ01000012.1	76.00	full	7,343	7,413	Natronolimnobius innermongolicus JCM 12255 contig_12, whole genome shotgun sequence.	Natronolimnobius innermongolicus JCM 12255
43		CP081183.1	75.90	full	21,955	21,893	CP081183.1 Salinarchaeum sp. IM2453 chromosome, complete genome	Salinarchaeum sp. IM2453
44		FNFC01000002.1	75.50	full	110,333	110,268	FNFC01000002.1 Halovenus aranensis strain IBRC-M10015 genome assembly, contig: Ga0104428_102, whole genome shotgun sequence	Halobacteriaceae archaeon EB27
45		CP003377.1	74.70	full	933,261	933,197	Natronobacterium gregoryi SP2, complete genome.	Natronobacterium gregoryi SP2
46		CP019067.1	74.70	full	527,941	528,011	Halorientalis sp. IM1011, complete genome.	Halorientalis sp. IM1011
47		QNGA01000001.1	74.70	full	1,450,935	1,451,006	QNGA01000001.1 Halophilic archaeon strain H22 scaffold1, whole genome shotgun sequence	halophilic archaeon
48		CP025066.1	74.60	full	2,681,238	2,681,179	CP025066.1 Halalkaliarchaeum desulfuricum strain AArc-Sl chromosome, complete genome	Halalkaliarchaeum desulfuricum
49		ASGZ01000049.1	74.40	full	3,617	3,683	Candidatus Halobonum tyrrellensis G22 contig00052, whole genome shotgun sequence.	Candidatus Halobonum tyrrellensis G22
50		CP007055.1	74.40	full	931,368	931,439	Halostagnicola larsenii XH-48, complete genome.	Halostagnicola larsenii XH-48
51		FTNP01000001.1	74.40	full	620,509	620,439	Haloterrigena daqingensis strain CGMCC 1.8909 genome assembly, contig: Ga0104462_101	Haloterrigena daqingensis
52		JMIP02000018.1	74.40	full	49,610	49,681	Halostagnicola sp. A56, whole genome shotgun sequence.	Halostagnicola sp. A56
53		CP042241.1	74.10	full	1,842,829	1,842,894	CP042241.1 Salarchaeum sp. JOR-1 chromosome, complete genome	Salarchaeum sp. JOR-1
54		FNHL01000001.1	73.90	full	1,106,127	1,106,186	FNHL01000001.1 Halogranum gelatinilyticum strain CGMCC 1.10119 genome assembly, contig: Ga0070202_101, whole genome shotgun sequence	Halogranum gelatinilyticum
55		FOJA01000001.1	73.90	full	601,052	601,117	FOJA01000001.1 Halobacterium jilantaiense strain CGMCC 1.5337 genome assembly, contig: Ga0070153_11, whole genome shotgun sequence	Halobacterium jilantaiense
56		FRAN01000001.1	73.80	full	127,837	127,771	FRAN01000001.1 Haladaptatus paucihalophilus DX253 genome assembly, contig: Ga0131227_101, whole genome shotgun sequence	Haladaptatus paucihalophilus DX253
57		WUAX01000016.1	73.70	full	25,693	25,623	WUAX01000016.1 Halorubrum sp. JWXQ-INN 858 NODE_64_length_643672_cov_117.261673, whole genome shotgun sequence	Halorubrum sp. JWXQ-INN 858
58		MWPH01000001.1	73.60	full	1,026,786	1,026,856	Natronolimnobius baerhuensis strain CGMCC 1.3597 ZB100000, whole genome shotgun sequence.	Natronolimnobius baerhuensis
59		CP028858.1	73.50	full	1,781,755	1,781,690	CP028858.1 Halococcoides cellulosivorans strain HArcel1 chromosome, complete genome	Halococcoides cellulosivorans
60		RBZW01000004.1	73.40	full	36,846	36,776	RBZW01000004.1 Salinadaptatus halalkaliphilus strain XQ-INN 246 NODE_4_length_39538_cov_84.770325, whole genome shotgun sequence	Salinadaptatus halalkaliphilus
61		CP019893.1	73.10	full	3,569,221	3,569,151	CP019893.1 Natrarchaeobaculum aegyptiacum strain JW/NM-HA 15 chromosome, complete genome	Natranaerobius sp. JW/NM-HA 15
62		AOIT01000016.1	72.90	full	177,551	177,622	Haloterrigena limicola JCM 13563 contig_16, whole genome shotgun sequence.	Haloterrigena limicola JCM 13563
63		SGTW01000291.1	72.80	full	1,573	1,503	SGTW01000291.1 Halorubrum sp. SD626R NODE_291_length_2868_cov_2.032470, whole genome shotgun sequence	Halorubrum sp. SD626R
64		AOIK01000013.1	72.70	full	69,332	69,262	AOIK01000013.1 Natrinema altunense JCM 12890 contig_13, whole genome shotgun sequence	Natrinema altunense JCM 12890
65		AE004437.1	72.60	full	593,897	593,832	Halobacterium sp. NRC-1, complete genome.	Halobacterium sp. NRC-1
66		LGUC01000001.1	72.50	full	1,546,080	1,546,144	Halolamina pelagica strain CDK2 SY89_scf01, whole genome shotgun sequence.	Halolamina pelagica
67		FNWU01000001.1	72.40	full	721,720	721,788	FNWU01000001.1 Halopenitus malekzadehii strain IBRC-M10418 genome assembly, contig: Ga0075267_101, whole genome shotgun sequence	Halopenitus malekzadehii
68		AOIU01000035.1	72.20	full	133,178	133,243	Halosimplex carlsbadense 2-9-1 contig_35, whole genome shotgun sequence.	Halosimplex carlsbadense 2-9-1
69		CP064791.1	72.00	full	489,201	489,136	CP064791.1 Halapricum desulfuricans strain HSR-Est chromosome, complete genome	Halapricum desulfuricans
70		SGTW01000013.1	71.90	full	59,160	59,230	SGTW01000013.1 Halorubrum sp. SD626R NODE_13_length_79146_cov_14.294220, whole genome shotgun sequence	Halorubrum sp. SD626R
71		CP001688.1	71.60	full	2,042,594	2,042,528	Halomicrobium mukohataei DSM 12286, complete genome.	Halomicrobium mukohataei DSM 12286
72		JNFH02000131.1	71.60	full	4,096	4,166	Halorubrum saccharovorum strain H3 NODE_131, whole genome shotgun sequence.	Halorubrum saccharovorum
73		WUUT01000004.1	71.50	full	183,505	183,570	WUUT01000004.1 Halovenus carboxidivorans strain WSH3 Ga0216322_104, whole genome shotgun sequence	Halovenus carboxidivorans
74		WPCA01000235.1	71.20	full	352	417	WPCA01000235.1 Halapricum sp. CBA1109 contig262, whole genome shotgun sequence	Halapricum sp. CBA1109
75		BMPG01000002.1	71.10	full	236,098	236,032	BMPG01000002.1 Halocalculus aciditolerans JCM 19596 DNA, sequence02, whole genome shotgun sequence	Halocalculus aciditolerans
76		KE356577.1	71.10	full	74,470	74,411	Halonotius sp. J07HN4 genomic scaffold scf7180000001347, whole genome shotgun sequence.	Halonotius sp. J07HN4
77		WPCE01000146.1	71.00	full	2,511	2,581	WPCE01000146.1 Halorubrum sp. CBA1125 contig206, whole genome shotgun sequence	Halorubrum sp. CBA1125
78		CP001365.1	70.90	full	634,508	634,578	Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete sequence.	Halorubrum lacusprofundi ATCC 49239
79		JAGGKQ010000011.1	70.50	full	10,575	10,645	JAGGKQ010000011.1 Halorubrum alkaliphilum strain DSM 23564 Ga0451174_11, whole genome shotgun sequence	Halorubrum alkaliphilum
80		CP096019.1	70.30	full	1,083,669	1,083,735	CP096019.1 Halocatena salina strain AD-1 chromosome, complete genome	Halocatena salina
81		CP058601.1	69.80	full	41,673	41,603	CP058601.1 Natrinema halophilum strain YPL8 chromosome, complete genome	Natrinema halophilum
82		WUYX01000029.1	69.80	full	96,770	96,699	WUYX01000029.1 Natronorubrum halalkaliphilum strain JWXQ-INN-674 NODE_44_length_180526_cov_103.936584, whole genome shotgun sequence	Natronorubrum halalkaliphilum
83		FQWV01000006.1	69.60	full	25,620	25,680	Halobaculum gomorrense strain DSM 9297 genome assembly, contig: Ga0131215_106	Halobaculum gomorrense
84		CP003050.1	69.60	full	866,901	866,810	Halovivax ruber XH-70, complete genome.	Halovivax ruber XH-70
85		QKNY01000006.1	69.60	full	67,448	67,507	QKNY01000006.1 Halonotius aquaticus strain F13-13 NODE_6_length_118392_cov_55.409607, whole genome shotgun sequence	Halonotius aquaticus
86		RKLU01000001.1	69.60	full	110,095	110,036	RKLU01000001.1 Halonotius terrestris strain F15B halo-c1_consensus_sequence, whole genome shotgun sequence	Halonotius terrestris
87		QKKZ01000002.1	69.40	full	338,302	338,238	QKKZ01000002.1 Halosegnis rubeus strain F18-79 NODE_2_length_520506_cov_7.457305, whole genome shotgun sequence	Halosegnis rubeus
88		CP016804.1	69.00	full	1,265,793	1,265,733	Halodesulfurarchaeum formicicum strain HSR6 chromosome, complete genome.	Halodesulfurarchaeum formicicum
89		FNYR01000005.1	69.00	full	124,759	124,818	FNYR01000005.1 Halohasta litchfieldiae strain DSM 22187 genome assembly, contig: Ga0131236_105, whole genome shotgun sequence	Halobacteriaceae archaeon tADL
90		CP026309.1	69.00	full	1,484,829	1,484,763	CP026309.1 Salinigranum rubrum strain GX10 chromosome, complete genome	Halobacteriaceae archaeon GX10
91		AOJO01000016.1	68.90	full	18,126	18,055	AOJO01000016.1 Halorubrum hochstenium ATCC 700873 contig_16, whole genome shotgun sequence	Halorubrum hochstenium ATCC 700873
92		AOHX01000042.1	68.80	full	103,712	103,642	Natronorubrum sulfidifaciens JCM 14089 contig_42, whole genome shotgun sequence.	Natronorubrum sulfidifaciens JCM 14089
93		FNQT01000001.1	68.60	full	652	711	FNQT01000001.1 Haloplanus vescus strain CGMCC 1.8712 genome assembly, contig: Ga0070191_101, whole genome shotgun sequence	Haloplanus vescus
94		KI543155.1	68.50	full	59,718	59,647	uncultured archaeon A07HR67 genomic scaffold scf7180000001154, whole genome shotgun sequence.	uncultured archaeon A07HR67
95		CP100355.1	68.40	full	3,479,695	3,479,623	CP100355.1 Natronosalvus rutilus strain WLHS1 chromosome, complete genome	Natronosalvus rutilus
96		FZNQ01000008.1	68.40	full	19,155	19,085	Halorubrum vacuolatum strain DSM 8800 genome assembly, contig: Ga0170423_108	Halorubrum vacuolatum
97		KE356568.1	68.10	full	1,829	1,888	KE356568.1 MAG: Halonotius sp. J07HN6 genomic scaffold scf7180000001852, whole genome shotgun sequence	Halonotius sp. J07HN6
98		WUUU01000038.1	67.80	full	738	641	WUUU01000038.1 Halobacterium bonnevillei strain PCN9 Ga0336688_1038, whole genome shotgun sequence	Halobacterium bonnevillei
99		CP002839.1	67.60	full	2,172,566	2,172,639	Halopiger xanaduensis SH-6, complete genome.	Halopiger xanaduensis SH-6
100		CP031310.1	67.50	full	352,124	352,190	CP031310.1 Halapricum salinum strain CBA1105 chromosome, complete genome	Halapricum salinum
101		FTNO01000001.1	67.50	full	1,413,355	1,413,464	Haladaptatus litoreus strain CGMCC 1.7737 genome assembly, contig: Ga0104463_101	Haladaptatus litoreus
102		JAGGLC010000003.1	67.40	full	304,514	304,575	JAGGLC010000003.1 Halolamina salifodinae strain DSM 26232 Ga0451177_03, whole genome shotgun sequence	Halolamina salifodinae
103		CP005962.1	67.20	full	2,955,315	2,955,225	Salinarchaeum sp. Harcht-Bsk1, complete genome.	Salinarchaeum sp. Harcht-Bsk1
104		AOMD01000016.1	67.10	full	129,258	129,318	Halococcus saccharolyticus DSM 5350 contig_16, whole genome shotgun sequence.	Halococcus saccharolyticus DSM 5350
105		CP001956.1	67.10	full	1,048,444	1,048,382	Haloferax volcanii DS2, complete genome.	Haloferax volcanii DS2
106		CP058529.1	66.80	full	533,136	533,197	CP058529.1 Halobaculum halophilum strain Gai3-2 chromosome, complete genome	Halobaculum halophilum
107		FXTD01000007.1	66.50	full	32,786	32,716	FXTD01000007.1 Halorubrum cibi strain DSM 19504 genome assembly, contig: Ga0170403_107, whole genome shotgun sequence	Halorubrum cibi
108		CP058579.1	66.50	full	2,812,664	2,812,603	CP058579.1 Halobaculum salinum strain NJ-3-1 chromosome, complete genome	Halobaculum salinum
109		VSLZ01000002.1	66.00	full	235,087	235,174	VSLZ01000002.1 Halorussus sp. MSC15.2 contig00002, whole genome shotgun sequence	Halorussus sp. MSC15.2
110		CP096658.1	65.30	full	2,740,757	2,740,868	CP096658.1 Halorussus gelatinilyticus strain XZYJT40 chromosome, complete genome	Halorussus gelatinilyticus
111		WSZK01000006.1	64.40	full	126,393	126,476	WSZK01000006.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_6, whole genome shotgun sequence	Halomarina oriensis
112		CP034345.1	62.90	full	730,198	730,141	CP034345.1 Haloplanus rallus strain MBLA0036 chromosome, complete genome	Haloplanus rallus
113		AOMC01000070.1	62.60	full	55,554	55,614	Halococcus morrhuae DSM 1307 contig_70, whole genome shotgun sequence.	Halococcus morrhuae DSM 1307
114		LN831302.1	61.60	full	790,324	790,413	Halobacterium hubeiense strain JI20-1 genome assembly, chromosome: I	Halobacterium hubeiense
115		CP033878.1	60.20	full	1,824,329	1,824,424	CP033878.1 Halorhabdus sp. CBA1104 chromosome, complete genome	Halorhabdus sp. CBA1104
116		CP001687.1	56.30	full	714,527	714,434	Halorhabdus utahensis DSM 12940, complete genome.	Halorhabdus utahensis DSM 12940
117		AOMB01000005.1	55.70	full	44,215	44,153	Halococcus hamelinensis 100A6 contig_5, whole genome shotgun sequence.	Halococcus hamelinensis 100A6

There are various ways to view or download the seed alignments that we store. You can use a sequence viewer to look at them, or you can look at a plain text version of the sequence in a variety of different formats. More...

View options

You can view Rfam seed alignments in your browser in various ways. Choose the viewer that you want to use and click the "View" button to show the alignment in a pop-up window.

Formatting options

You can view or download Rfam seed alignments in several formats. Check either the "download" button, to save the formatted alignment, or "view", to see it in your browser window, and click "Generate".

Download

Download a gzip-compressed, Stockholm-format file containing the seed alignment for this family. You may find RALEE useful when viewing sequence alignments.

Submit a new alignment

We're happy receive updated seed alignments for new or existing families. Submit your new alignment and we'll take a look.

In this page you can view static images showing the secondary structure of this family using a variety of colouring schemes:

Conservation (cons): this plot colours each character by how well conserved it is. A site with 100% sequence conservation is coloured red, 0% is violet.

Covariation (cov): this plot colours each base-pair according to how much the corresponding nucleotides are co-varying. A base-pair position at which every pair of nucleotides is co-variant with respect to every other pair in the alignment gets a score of 2 and is coloured red. Conversely, a base-pair position at every pair is anti-co-variant with respect to every other pair (e.g. lots of mutations to non-canonical pairs) gets a score of -2 and is coloured violet. Further information on this metric can be found in this document.

Sequence entropy (ent): this plot colours each character by how under- or over-represented the residues at the site are. Sites where one or more nucleotides are over-represented while the other nucleotides are either non-existent or near the background frequencies, receive positive scores; sites where all the nucleotides are under-represented receive negative scores. Further information on this metric can be found in this document.

Fraction of canonical basepairs (fcbp): this plot colours each base-pair by the percentage of canonical basepairs (A:U, C:G, G:U) which are found in the corresponding position in the alignment. A pair of sites with 100% canonical pairs is coloured red, a site with 0% is violet.

Maximum parse of the covariance model (maxcm): this plot takes the covariance model for the family and generates the sequence with the maximum possible score for that model. Each character is coloured by how many bits it contributes to the total score.

Sequence: for most of the above cases, the representative sequence used for the backbone is the most informative sequence (MIS). Any residue that has a higher frequency than than the background frequency is projected into the IUPAC redundancy codes.

Normal: this plot simply colours each stem loop

R-chie (rchie): arc diagrams showing secondary structure, calculated using the R-chie package. The consensus secondary structure is visualized as arc diagrams on top of each diagram, where a basepair in an arc, connect two columns of the block of sequences below. The block of sequences below represent the multiple sequence alignment of the Rfam seed, where each sequence is a horizontal strip. Sequences in the alignments are ordered so sequences that best fit the structure are on top, and those that do not fit as well are towards the bottom. For seed alignments for over 500 sequences, 500 random sequences were chosen. Rfam entries without sturcture have a blank plot. Colour information can be found on the R-chie FAQ.

You can also view the secondary structure in the VARNA applet. The applet is shown in a separate pop-up window.

Acknowledgements

The bulk of the code for generating these graphics was kindly supplied by Andreas Gruber and Ivo Hofacker. The statistics were implemented by Rfam.

The VARNA applet is developed by Yann Ponty et al:

The R-chie arc diagrams were calculated using R-chie:

These trees were generated using either a maximum likelihood approach or neighbour-joining. If the number of sequences in the alignment was less than or equal to 64 then the maximum likelihood approach of Rivas and Eddy was used [1]. For families with more than 64 sequences in the alignment the neighbour-joining approach with F84 distances as implemented in phylip was used [2].

Note: You can also download the data file for the seed tree.

We do not have tree information for this family. This is most likely due to the size of the family and the number of species covered. For very large families it is too computationally expensive to calculate trees and the resulting tree images would be too large to display in a browser.