# Species tree for RF02001 # Generated from Rfam version 15.00 | +--methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen) (2) | +--alkaliphilic bacterium Su22 (1) | +--marine bacterium H6 (1) | +--rumen bacterium NK3A20 (4) | +--Eukaryota (79) | | | +--Alveolata (1) | | | | | +--Dinophyceae (1) | | | | | +--Suessiales (1) | | | | | +--Symbiodiniaceae (1) | | | | | +--Symbiodinium natans (1) | | | +--Metazoa (60) | | | | | +--Nematoda (3) | | | | | | | +--Chromadorea (3) | | | | | | | +--Rhabditida (3) | | | | | | | +--Strongylida (2) | | | | | | | | | +--Strongyloidea (1) | | | | | | | | | | | +--Strongylidae (1) | | | | | | | | | | | +--Cyathostominae (1) | | | | | | | | | | | +--Cylicostephanus goldi (1) | | | | | | | | | +--Ancylostomatoidea (1) | | | | | | | | | +--Ancylostomatidae (1) | | | | | | | | | +--Bunostominae (1) | | | | | | | | | +--Necator americanus (1) | | | | | | | +--Rhabditoidea (1) | | | | | | | +--Rhabditidae (1) | | | | | | | +--Peloderinae (1) | | | | | | | +--Caenorhabditis briggsae (1) | | | | | +--Chordata (40) | | | | | | | +--Craniata (40) | | | | | | | +--Vertebrata (40) | | | | | | | +--Euteleostomi (40) | | | | | | | +--Lepidosauria (2) | | | | | | | | | +--Squamata (2) | | | | | | | | | +--Scleroglossa (2) | | | | | | | | | +--Serpentes (2) | | | | | | | | | +--Colubroidea (2) | | | | | | | | | +--Colubridae (1) | | | | | | | | | | | +--Colubrinae (1) | | | | | | | | | | | +--Pantherophis guttatus (1) | | | | | | | | | +--Elapidae (1) | | | | | | | | | +--Acanthophiinae (1) | | | | | | | | | +--Pseudonaja textilis (1) | | | | | | | +--Actinopterygii (7) | | | | | | | | | +--Neopterygii (7) | | | | | | | | | +--Teleostei (7) | | | | | | | | | +--Euteleostei (7) | | | | | | | | | +--Protacanthopterygii (6) | | | | | | | | | | | +--Salmoniformes (6) | | | | | | | | | | | +--Salmonidae (6) | | | | | | | | | | | +--Coregoninae (1) | | | | | | | | | | | | | +--Coregonus sp. 'balchen' (1) | | | | | | | | | | | +--Salmoninae (5) | | | | | | | | | | | +--Hucho hucho (huchen) (4) | | | | | | | | | | | +--Oncorhynchus tshawytscha (Chinook salmon) (1) | | | | | | | | | +--Neoteleostei (1) | | | | | | | | | +--Acanthomorpha (1) | | | | | | | | | +--Acanthopterygii (1) | | | | | | | | | +--Percomorpha (1) | | | | | | | | | +--Perciformes (1) | | | | | | | | | +--Percoidei (1) | | | | | | | | | +--Apogonidae (1) | | | | | | | | | +--Apogoninae (1) | | | | | | | | | +--Sphaeramia orbicularis (1) | | | | | | | +--Mammalia (9) | | | | | | | | | +--Eutheria (9) | | | | | | | | | +--Euarchontoglires (6) | | | | | | | | | | | +--Primates (5) | | | | | | | | | | | | | +--Haplorrhini (5) | | | | | | | | | | | | | +--Catarrhini (5) | | | | | | | | | | | | | +--Hominidae (2) | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (1) | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (1) | | | | | | | | | | | | | +--Cercopithecidae (3) | | | | | | | | | | | | | +--Cercopithecinae (1) | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (1) | | | | | | | | | | | | | +--Colobinae (2) | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (1) | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (1) | | | | | | | | | | | +--Glires (1) | | | | | | | | | | | +--Rodentia (1) | | | | | | | | | | | +--Sciurognathi (1) | | | | | | | | | | | +--Muroidea (1) | | | | | | | | | | | +--Muridae (1) | | | | | | | | | | | +--Murinae (1) | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (1) | | | | | | | | | +--Laurasiatheria (3) | | | | | | | | | +--Carnivora (2) | | | | | | | | | | | +--Caniformia (2) | | | | | | | | | | | +--Phocidae (1) | | | | | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (1) | | | | | | | | | | | +--Mustelidae (1) | | | | | | | | | | | +--Mustelinae (1) | | | | | | | | | | | +--Mustela putorius furo (domestic ferret) (1) | | | | | | | | | +--Cetartiodactyla (1) | | | | | | | | | +--Suina (1) | | | | | | | | | +--Tayassuidae (1) | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (1) | | | | | | | +--Testudines (2) | | | | | | | | | +--Cryptodira (2) | | | | | | | | | +--Testudinoidea (2) | | | | | | | | | +--Chelydridae (2) | | | | | | | | | +--Platysternon megacephalum (big-headed turtle) (2) | | | | | | | +--Archosauria (20) | | | | | | | +--Dinosauria (19) | | | | | | | | | +--Saurischia (19) | | | | | | | | | +--Theropoda (19) | | | | | | | | | +--Coelurosauria (19) | | | | | | | | | +--Aves (19) | | | | | | | | | +--Palaeognathae (1) | | | | | | | | | | | +--Tinamiformes (1) | | | | | | | | | | | +--Tinamidae (1) | | | | | | | | | | | +--Crypturellus soui (1) | | | | | | | | | +--Neognathae (18) | | | | | | | | | +--Passeriformes (13) | | | | | | | | | | | +--Sturnidae (2) | | | | | | | | | | | | | +--Leucopsar rothschildi (1) | | | | | | | | | | | | | +--Lamprotornis superbus (1) | | | | | | | | | | | +--Acanthisittidae (1) | | | | | | | | | | | | | +--Acanthisitta chloris (1) | | | | | | | | | | | +--Pittidae (1) | | | | | | | | | | | | | +--Pitta sordida (hooded pitta) (1) | | | | | | | | | | | +--Bombycillidae (1) | | | | | | | | | | | | | +--Bombycilla garrulus (1) | | | | | | | | | | | +--Rhabdornithidae (1) | | | | | | | | | | | | | +--Rhabdornis inornatus (1) | | | | | | | | | | | +--Passeroidea (3) | | | | | | | | | | | | | +--Fringillidae (1) | | | | | | | | | | | | | | | +--Emberizinae (1) | | | | | | | | | | | | | | | +--Emberizini (1) | | | | | | | | | | | | | | | +--Junco hyemalis (dark-eyed junco) (1) | | | | | | | | | | | | | +--Alaudidae (1) | | | | | | | | | | | | | | | +--Calandrella cheleensis (1) | | | | | | | | | | | | | +--Passeridae (1) | | | | | | | | | | | | | +--Prunella fulvescens (1) | | | | | | | | | | | +--Menuridae (1) | | | | | | | | | | | | | +--Atrichornis clamosus (1) | | | | | | | | | | | +--Muscicapidae (1) | | | | | | | | | | | | | +--Cercotrichas coryphoeus (Karoo scrub-robin) (1) | | | | | | | | | | | +--Rhinocryptidae (1) | | | | | | | | | | | | | +--Scytalopus superciliaris (1) | | | | | | | | | | | +--Furnariidae (1) | | | | | | | | | | | +--Furnarius figulus (1) | | | | | | | | | +--Ciconiiformes (1) | | | | | | | | | | | +--Threskiornithidae (1) | | | | | | | | | | | +--Nipponia nippon (crested ibis) (1) | | | | | | | | | +--Charadriiformes (2) | | | | | | | | | | | +--Rostratulidae (1) | | | | | | | | | | | | | +--Rostratula benghalensis (greater painted-snipe) (1) | | | | | | | | | | | +--Dromadidae (1) | | | | | | | | | | | +--Dromas ardeola (1) | | | | | | | | | +--Piciformes (1) | | | | | | | | | | | +--Lybiidae (1) | | | | | | | | | | | +--Tricholaema leucomelas (pied barbet) (1) | | | | | | | | | +--Columbiformes (1) | | | | | | | | | +--Columbidae (1) | | | | | | | | | +--Columbina picui (picui ground-dove) (1) | | | | | | | +--Crocodylidae (1) | | | | | | | +--Alligatorinae (1) | | | | | | | +--Alligator mississippiensis (American alligator) (1) | | | | | +--Arthropoda (15) | | | | | | | +--Hexapoda (10) | | | | | | | | | +--Insecta (10) | | | | | | | | | +--Pterygota (10) | | | | | | | | | +--Neoptera (10) | | | | | | | | | +--Endopterygota (3) | | | | | | | | | | | +--Diptera (3) | | | | | | | | | | | +--Nematocera (3) | | | | | | | | | | | +--Culicoidea (2) | | | | | | | | | | | | | +--Culicidae (2) | | | | | | | | | | | | | +--Culicinae (2) | | | | | | | | | | | | | +--Aedini (2) | | | | | | | | | | | | | +--Aedes (2) | | | | | | | | | | | | | +--Aedes aegypti (yellow fever mosquito) (2) | | | | | | | | | | | +--Sciaroidea (1) | | | | | | | | | | | +--Sciaridae (1) | | | | | | | | | | | +--Bradysia hygida (1) | | | | | | | | | +--Paraneoptera (7) | | | | | | | | | +--Hemiptera (7) | | | | | | | | | +--Euhemiptera (7) | | | | | | | | | +--Heteroptera (7) | | | | | | | | | +--Panheteroptera (7) | | | | | | | | | +--Cimicomorpha (7) | | | | | | | | | +--Reduviidae (7) | | | | | | | | | +--Triatominae (7) | | | | | | | | | +--Rhodnius prolixus (7) | | | | | | | +--Crustacea (4) | | | | | | | | | +--Branchiopoda (1) | | | | | | | | | | | +--Diplostraca (1) | | | | | | | | | | | +--Cladocera (1) | | | | | | | | | | | +--Anomopoda (1) | | | | | | | | | | | +--Daphniidae (1) | | | | | | | | | | | +--Daphnia pulex (1) | | | | | | | | | +--Ostracoda (3) | | | | | | | | | +--Podocopa (3) | | | | | | | | | +--Podocopida (3) | | | | | | | | | +--Darwinulocopina (3) | | | | | | | | | +--Darwinuloidea (3) | | | | | | | | | +--Darwinulidae (3) | | | | | | | | | +--Darwinula stevensoni (3) | | | | | | | +--Chelicerata (1) | | | | | | | +--Arachnida (1) | | | | | | | +--Acari (1) | | | | | | | +--Parasitiformes (1) | | | | | | | +--Ixodida (1) | | | | | | | +--Ixodoidea (1) | | | | | | | +--Ixodidae (1) | | | | | | | +--Ixodinae (1) | | | | | | | +--Ixodes scapularis (black-legged tick) (1) | | | | | +--Mollusca (1) | | | | | | | +--Cephalopoda (1) | | | | | | | +--Coleoidea (1) | | | | | | | +--Neocoleoidea (1) | | | | | | | +--Octopodiformes (1) | | | | | | | +--Octopoda (1) | | | | | | | +--Incirrata (1) | | | | | | | +--Octopodidae (1) | | | | | | | +--Octopus vulgaris (common octopus) (1) | | | | | +--Echinodermata (1) | | | | | +--Eleutherozoa (1) | | | | | +--Echinozoa (1) | | | | | +--Holothuroidea (1) | | | | | +--Aspidochirotacea (1) | | | | | +--Aspidochirotida (1) | | | | | +--Stichopodidae (1) | | | | | +--Apostichopus japonicus (1) | | | +--Rhizaria (2) | | | | | +--Foraminifera (2) | | | | | +--Reticulomyxidae (2) | | | | | +--Reticulomyxa filosa (2) | | | +--Viridiplantae (14) | | | | | +--Streptophyta (14) | | | | | +--Embryophyta (10) | | | | | | | +--Tracheophyta (10) | | | | | | | +--Spermatophyta (10) | | | | | | | +--Magnoliophyta (10) | | | | | | | +--eudicotyledons (10) | | | | | | | +--coreeudicotyledons (6) | | | | | | | | | +--rosids (4) | | | | | | | | | | | +--malvids (4) | | | | | | | | | | | +--Brassicales (3) | | | | | | | | | | | | | +--Brassicaceae (3) | | | | | | | | | | | | | +--Brassiceae (3) | | | | | | | | | | | | | +--Brassica oleracea var. oleracea (1) | | | | | | | | | | | | | +--Brassica napus (rape) (1) | | | | | | | | | | | | | +--Brassica carinata (1) | | | | | | | | | | | +--Myrtales (1) | | | | | | | | | | | +--Myrtaceae (1) | | | | | | | | | | | +--Eucalyptus grandis (1) | | | | | | | | | +--asterids (2) | | | | | | | | | +--Ericales (1) | | | | | | | | | | | +--Theaceae (1) | | | | | | | | | | | +--Camellia sinensis (1) | | | | | | | | | +--lamiids (1) | | | | | | | | | +--Gentianales (1) | | | | | | | | | +--Rubiaceae (1) | | | | | | | | | +--Ixoroideae (1) | | | | | | | | | +--Coffeeae (1) | | | | | | | | | +--Coffea canephora (1) | | | | | | | +--Ranunculales (4) | | | | | | | +--Papaveraceae (4) | | | | | | | +--Papaver nudicaule (4) | | | | | +--Streptophytina (4) | | | | | +--Zygnemophyceae (4) | | | | | +--Zygnematophycidae (4) | | | | | +--Desmidiales (4) | | | | | +--Closteriaceae (4) | | | | | +--Closterium (4) | | | | | +--Closteriumperacerosum-strigosum-littoralecomplex (4) | | | | | +--Closterium sp. NIES-67 (4) | | | +--Opisthokonta (2) | | | +--Metazoa (1) | | | | | +--Eumetazoa (1) | | | | | +--Bilateria (1) | | | | | +--Protostomia (1) | | | | | +--Ecdysozoa (1) | | | | | +--Panarthropoda (1) | | | | | +--Arthropoda (1) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Araneae (1) | | | | | +--Araneomorphae (1) | | | | | +--Entelegynae (1) | | | | | +--Orbiculariae (1) | | | | | +--Araneoidea (1) | | | | | +--Nephilidae (1) | | | | | +--Trichonephila clavata (joro spider) (1) | | | +--Fungi (1) | | | +--Fungiincertaesedis (1) | | | +--Mucoromycota (1) | | | +--Glomeromycotina (1) | | | +--Glomeromycetes (1) | | | +--Glomerales (1) | | | +--Glomeraceae (1) | | | +--Rhizophagus (1) | | | +--Rhizophagus sp. MUCL 43196 (1) | +--unclassifiedArenibacter (9) | | | +--Arenibacter (9) | | | +--Flavobacteriaceae (9) | | | +--Flavobacteriales (9) | | | +--Flavobacteriia (9) | | | +--Bacteroidota (9) | | | +--Bacteroidota/Chlorobiotagroup (9) | | | +--FCBgroup (9) | | | +--Arenibacter sp. NBRC 103722 (9) | +--Bacteria (4267) | | | +--Nitrospirota (1) | | | | | +--Nitrospiria (1) | | | | | +--Nitrospirales (1) | | | | | +--Nitrospiraceae (1) | | | | | +--Leptospirillum (1) | | | | | +--Leptospirillumsp.GroupIII (1) | | | | | +--Leptospirillum ferriphilum YSK (1) | | | +--bacterium 1xD8-6 (4) | | | +--Bathymodiolus heckerae thiotrophic gill symbiont (1) | | | +--bacterium 1XD21-70 (2) | | | +--Cyanobacteria (1) | | | | | +--Oscillatoriales (1) | | | | | +--Leptolyngbya sp. Uher 2000/2452 (1) | | | +--Fusobacteria (1) | | | | | +--Fusobacteriales (1) | | | | | +--Fusobacteriaceae (1) | | | | | +--[Leptotrichia] amnionii (1) | | | +--Bacteroidetes bacterium YM8-076 (1) | | | +--Haloplasmatales (3) | | | | | +--Haloplasmataceae (3) | | | | | +--Haloplasma contractile SSD-17B (3) | | | +--unclassifiedBacteria (3) | | | | | +--bacterium F16 (1) | | | | | +--bacterium M21 (1) | | | | | +--bacterium B13(2017) (1) | | | +--Proteobacteria (635) | | | | | +--Olavius sp. associated proteobacterium Delta 1 (3) | | | | | +--Alphaproteobacteria (30) | | | | | | | +--Rhizobiales (15) | | | | | | | | | +--Hyphomicrobiaceae (1) | | | | | | | | | | | +--Gemmiger formicilis (1) | | | | | | | | | +--Brucellaceae (5) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (5) | | | | | | | | | +--Rhizobiaceae (5) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (1) | | | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (4) | | | | | | | | | | | +--Sinorhizobium saheli (1) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (1) | | | | | | | | | | | +--Sinorhizobium fredii NGR234 (2) | | | | | | | | | +--Phyllobacteriaceae (1) | | | | | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | | | +--Bradyrhizobiaceae (3) | | | | | | | | | +--Bradyrhizobium sp. LMTR 3 (2) | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (1) | | | | | | | +--Rhodospirillales (8) | | | | | | | | | +--Rhodospirillaceae bacterium Ia16 (1) | | | | | | | | | +--Rhodospirillaceae (7) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | | | +--Telmatospirillum siberiense (2) | | | | | | | | | +--Skermanella (1) | | | | | | | | | | | +--Skermanella stibiiresistens SB22 (1) | | | | | | | | | +--Rhodospirillum oryzae (1) | | | | | | | | | +--Roseospira goensis (2) | | | | | | | +--Sphingomonadales (7) | | | | | | | +--Erythrobacteraceae (1) | | | | | | | | | +--Altererythrobacter indicus (1) | | | | | | | +--Sphingomonadaceae (6) | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | +--Sphingopyxis sp. BZ30 (2) | | | | | | | +--Sphingobium sp. TCM1 (1) | | | | | | | +--Novosphingobium pentaromativorans US6-1 (1) | | | | | | | +--Sphingomonas (1) | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (1) | | | | | +--gamma proteobacterium DKE (3) | | | | | +--Deltaproteobacteria (93) | | | | | | | +--Myxococcales (6) | | | | | | | | | +--Nannocystineae (5) | | | | | | | | | | | +--Nannocystaceae (5) | | | | | | | | | | | +--Plesiocystis pacifica SIR-1 (5) | | | | | | | | | +--Enhygromyxa salina (1) | | | | | | | +--Desulfovibrionales (6) | | | | | | | | | +--Desulfohalobiaceae (6) | | | | | | | | | +--Desulfohalobium retbaense DSM 5692 (6) | | | | | | | +--Desulfuromonadales (28) | | | | | | | | | +--Desulfuromonadaceae (2) | | | | | | | | | | | +--Desulfuromonas acetexigens (2) | | | | | | | | | +--Pelobacteraceae (6) | | | | | | | | | | | +--Pelobacter carbinolicus DSM 2380 (5) | | | | | | | | | | | +--Pelobacter propionicus DSM 2379 (1) | | | | | | | | | +--Geobacteraceae (20) | | | | | | | | | +--Geobacter uraniireducens Rf4 (10) | | | | | | | | | +--Geobacter sp. FRC-32 (2) | | | | | | | | | +--Geobacter sulfurreducens PCA (2) | | | | | | | | | +--Geobacter pelophilus (6) | | | | | | | +--Desulfobacterales (46) | | | | | | | | | +--Desulfobulbaceae (3) | | | | | | | | | | | +--Desulfotalea psychrophila LSv54 (2) | | | | | | | | | | | +--Desulfurivibrio alkaliphilus AHT2 (1) | | | | | | | | | +--Desulfobacteraceae (43) | | | | | | | | | +--Desulfonema ishimotonii (1) | | | | | | | | | +--Desulfoluna spongiiphila (4) | | | | | | | | | +--Desulfobacula toluolica Tol2 (29) | | | | | | | | | +--Desulfobacter latus (5) | | | | | | | | | +--Desulfonema limicola (2) | | | | | | | | | +--Desulfobacter postgatei 2ac9 (1) | | | | | | | | | +--Desulfobacterium autotrophicum HRM2 (1) | | | | | | | +--Spirobacillus cienkowskii (1) | | | | | | | +--Syntrophobacterales (6) | | | | | | | +--Syntrophobacteraceae (3) | | | | | | | | | +--Syntrophobacter fumaroxidans MPOB (2) | | | | | | | | | +--Desulforhabdus amnigena (1) | | | | | | | +--Syntrophaceae (3) | | | | | | | +--Syntrophus aciditrophicus SB (1) | | | | | | | +--Syntrophus gentianae (2) | | | | | +--gamma proteobacterium HdN1 (10) | | | | | +--delta/epsilonsubdivisions (53) | | | | | | | +--Deltaproteobacteria (53) | | | | | | | +--Myxococcales (1) | | | | | | | | | +--Cystobacterineae (1) | | | | | | | | | +--Vulgatibacteraceae (1) | | | | | | | | | +--Vulgatibacter incomptus (1) | | | | | | | +--Desulfovibrionales (6) | | | | | | | | | +--Desulfovibrionaceae (6) | | | | | | | | | +--Desulfovibrio sp. An276 (6) | | | | | | | +--Desulfuromonadales (16) | | | | | | | | | +--Desulfuromonadaceae (16) | | | | | | | | | +--Malonomonas (1) | | | | | | | | | | | +--Malonomonas rubra DSM 5091 (1) | | | | | | | | | +--Desulfuromonas sp. DDH964 (15) | | | | | | | +--Desulfobacterales (19) | | | | | | | | | +--Desulfobulbaceae (12) | | | | | | | | | | | +--Desulfofustis (2) | | | | | | | | | | | | | +--Desulfofustis glycolicus DSM 9705 (2) | | | | | | | | | | | +--Desulfobulbus sp. Tol-SR (2) | | | | | | | | | | | +--Desulfopila (5) | | | | | | | | | | | | | +--Desulfopila aestuarii DSM 18488 (5) | | | | | | | | | | | +--Desulfocapsa (3) | | | | | | | | | | | +--Desulfocapsa sulfexigens DSM 10523 (3) | | | | | | | | | +--Desulfobacteraceae (7) | | | | | | | | | +--Desulfotignum (1) | | | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | | | +--Desulfococcus (1) | | | | | | | | | | | +--Desulfococcus multivorans DSM 2059 (1) | | | | | | | | | +--Desulfobacterium (5) | | | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (5) | | | | | | | +--unclassifiedDeltaproteobacteria (5) | | | | | | | | | +--Deltaproteobacteria bacterium (3) | | | | | | | | | +--Dissulfuribacter thermophilus (2) | | | | | | | +--Syntrophobacterales (6) | | | | | | | +--Syntrophaceae (6) | | | | | | | +--Smithella sp. F21 (1) | | | | | | | +--Smithella sp. SCADC (5) | | | | | +--delta proteobacterium PL12 (5) | | | | | +--gamma proteobacterium NH6-24 (1) | | | | | +--Gammaproteobacteria (288) | | | | | | | +--Solimonas sp. NAA16 (1) | | | | | | | +--unclassifiedGammaproteobacteria (2) | | | | | | | | | +--sulfur-oxidizingsymbionts (2) | | | | | | | | | +--Candidatus Thiodiazotropha endolucinida (2) | | | | | | | +--Enterobacterales (3) | | | | | | | | | +--Yersiniaceae (2) | | | | | | | | | | | +--Serratia sp. DD3 (2) | | | | | | | | | +--Enterobacteriaceae (1) | | | | | | | | | +--Klebsiella michiganensis (1) | | | | | | | +--Aeromonadales (5) | | | | | | | | | +--Succinivibrionaceae (5) | | | | | | | | | +--Anaerobiospirillum thomasii (3) | | | | | | | | | +--Succinatimonas hippei YIT 12066 (2) | | | | | | | +--Methylococcales (37) | | | | | | | | | +--Crenotrichaceae (1) | | | | | | | | | | | +--Crenothrix polyspora (1) | | | | | | | | | +--Methylococcaceae (36) | | | | | | | | | +--Methylomonas methanica MC09 (8) | | | | | | | | | +--Methylomonas sp. LWB (4) | | | | | | | | | +--Methylomicrobium album BG8 (2) | | | | | | | | | +--Methylomonas lenta (2) | | | | | | | | | +--Methyloprofundus sedimenti (20) | | | | | | | +--Alteromonadales (47) | | | | | | | | | +--Pseudoalteromonadaceae (5) | | | | | | | | | | | +--Pseudoalteromonas citrea (2) | | | | | | | | | | | +--Pseudoalteromonas sp. S4498 (3) | | | | | | | | | +--Colwelliaceae (9) | | | | | | | | | | | +--Thalassomonas actiniarum (1) | | | | | | | | | | | +--Thalassotalea sp. ND16A (1) | | | | | | | | | | | +--Colwellia sp. MT41 (7) | | | | | | | | | +--Shewanellaceae (11) | | | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | | | +--Shewanella woodyi ATCC 51908 (1) | | | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | | | +--Shewanella spongiae (7) | | | | | | | | | | | +--Shewanella fodinae (1) | | | | | | | | | +--Alteromonadaceae (22) | | | | | | | | | +--Catenovulum maritimum (2) | | | | | | | | | +--Marinobacter sp. AC-23 (1) | | | | | | | | | +--Glaciecola sp. BSs20135 (1) | | | | | | | | | +--Marinobacter sp. M9B(2010) (2) | | | | | | | | | +--Catenovulum (2) | | | | | | | | | | | +--Catenovulum agarivorans DS-2 (2) | | | | | | | | | +--Marinobacterium nitratireducens (1) | | | | | | | | | +--Marinobacter lutaoensis (2) | | | | | | | | | +--Alteromonas confluentis (10) | | | | | | | | | +--Bowmanella sp. UDC354 (1) | | | | | | | +--Xanthomonadales (4) | | | | | | | | | +--Xanthomonadaceae (4) | | | | | | | | | +--Dokdonella sp. PYM5-11 (1) | | | | | | | | | +--Pseudoxanthomonas spadix BD-a59 (2) | | | | | | | | | +--Rhodanobacter sp. MO64 (1) | | | | | | | +--Enterobacteriales (18) | | | | | | | | | +--Enterobacteriaceae (18) | | | | | | | | | +--Serratia fonticola (4) | | | | | | | | | +--Serratia sp. ATCC 39006 (2) | | | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (5) | | | | | | | | | +--Serratia (2) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (2) | | | | | | | | | +--Escherichia coli S88 (1) | | | | | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | | | | | +--Escherichia coli APEC O1 (1) | | | | | | | | | +--aphidsecondarysymbionts (1) | | | | | | | | | +--Hamiltonella endosymbiont of Bemisia tabaci (1) | | | | | | | +--Oceanospirillales (73) | | | | | | | | | +--Oleiphilaceae (2) | | | | | | | | | | | +--Oleiphilus messinensis (2) | | | | | | | | | +--Hahellaceae (47) | | | | | | | | | | | +--Endozoicomonas numazuensis (26) | | | | | | | | | | | +--Hahella chejuensis KCTC 2396 (7) | | | | | | | | | | | +--Endozoicomonas montiporae (14) | | | | | | | | | +--Saccharospirillaceae (1) | | | | | | | | | | | +--Gynuella (1) | | | | | | | | | | | +--Gynuella sunshinyii YC6258 (1) | | | | | | | | | +--Halomonadaceae (11) | | | | | | | | | | | +--Halomonas halmophila (1) | | | | | | | | | | | +--Halomonas sp. 1513 (2) | | | | | | | | | | | +--Halomonas sp. N12 (1) | | | | | | | | | | | +--Halomonas cerina (1) | | | | | | | | | | | +--Halomonas muralis (1) | | | | | | | | | | | +--Halomonas chromatireducens (2) | | | | | | | | | | | +--Halomonas taeanensis (1) | | | | | | | | | | | +--Modicisalibacter sp. YIM 90637 (2) | | | | | | | | | +--Marinomonas mediterranea MMB-1 (1) | | | | | | | | | +--Oceanospirillaceae (10) | | | | | | | | | | | +--Oleispira (4) | | | | | | | | | | | | | +--Oleispira antarctica RB-8 (4) | | | | | | | | | | | +--Nitrincola sp. A-D6 (1) | | | | | | | | | | | +--Osedax symbiont Rs1 (3) | | | | | | | | | | | +--Marinobacterium sp. ST58-10 (2) | | | | | | | | | +--Marinomonas pollencensis (1) | | | | | | | +--Pseudomonadales (24) | | | | | | | | | +--Pseudomonadaceae (24) | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (2) | | | | | | | | | +--Pseudomonas japonica (2) | | | | | | | | | +--Rugamonas rubra (1) | | | | | | | | | +--Pseudomonas fluorescens HK44 (9) | | | | | | | | | +--Pseudomonas putida KT2440 (8) | | | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | | | | | +--Azomonas macrocytogenes (1) | | | | | | | +--Thiohalomonas denitrificans (2) | | | | | | | +--Immundisolibacterales (1) | | | | | | | | | +--Immundisolibacteraceae (1) | | | | | | | | | +--Immundisolibacter cernigliae (1) | | | | | | | +--Vibrionales (40) | | | | | | | | | +--Vibrionaceae (40) | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | +--Vibrio sp. F10 (1) | | | | | | | | | +--Photobacterium lipolyticum (2) | | | | | | | | | +--Vibrio navarrensis (2) | | | | | | | | | +--Photobacterium profundum SS9 (8) | | | | | | | | | +--Photobacterium sp. Gung47 (19) | | | | | | | | | +--Photobacterium profundum (1) | | | | | | | | | +--Vibrio (3) | | | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | | | +--Vibrio aerogenes CECT 7868 (1) | | | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (3) | | | | | | | +--Cellvibrionales (1) | | | | | | | | | +--Spongiibacteraceae (1) | | | | | | | | | +--gamma proteobacterium BDW918 (1) | | | | | | | +--Chromatiales (18) | | | | | | | | | +--Ectothiorhodospiraceae (6) | | | | | | | | | | | +--Ectothiorhodospira sp. B7-7 (3) | | | | | | | | | | | +--Nitrococcus mobilis Nb-231 (3) | | | | | | | | | +--Chromatiaceae (12) | | | | | | | | | +--Thiocapsa imhoffii (1) | | | | | | | | | +--Pararheinheimera mesophila (1) | | | | | | | | | +--Allochromatium vinosum DSM 180 (2) | | | | | | | | | +--Thioflavicoccus (2) | | | | | | | | | | | +--Thioflavicoccus mobilis 8321 (2) | | | | | | | | | +--Thiocapsa marina 5811 (1) | | | | | | | | | +--Thiohalocapsa (2) | | | | | | | | | | | +--uncultured Thiohalocapsa sp. PB-PSB1 (2) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (3) | | | | | | | +--Thiotrichales (11) | | | | | | | | | +--Thiotrichaceae (9) | | | | | | | | | | | +--Achromatium sp. WMS2 (8) | | | | | | | | | | | +--Achromatium sp. WMS3 (1) | | | | | | | | | +--Piscirickettsiaceae (2) | | | | | | | | | +--Cycloclasticus sp. symbiont of Bathymodiolus heckerae (2) | | | | | | | +--Acidithiobacillales (1) | | | | | | | +--Acidithiobacillaceae (1) | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (1) | | | | | +--Magnetococcus sp. MC-1 (6) | | | | | +--Betaproteobacteria (133) | | | | | | | +--unclassifiedBetaproteobacteria (9) | | | | | | | | | +--Candidatus Accumulibacter aalborgensis (1) | | | | | | | | | +--Betaproteobacteria bacterium MOLA814 (2) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-12 (2) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-11 (3) | | | | | | | +--Gallionellales (1) | | | | | | | | | +--Gallionellaceae (1) | | | | | | | | | +--Candidatus Gallionella acididurans (1) | | | | | | | +--Burkholderiales (95) | | | | | | | | | +--Alcaligenaceae (15) | | | | | | | | | | | +--Pusillimonas terrae (1) | | | | | | | | | | | +--Oligella (1) | | | | | | | | | | | | | +--Oligella urethralis DNF00040 (1) | | | | | | | | | | | +--Pusillimonas sp. MJ07 (1) | | | | | | | | | | | +--Pusillimonas noertemannii (4) | | | | | | | | | | | +--Bordetella ansorpii (1) | | | | | | | | | | | +--Advenella (7) | | | | | | | | | | | +--Advenella mimigardefordensis DPN7 (7) | | | | | | | | | +--Tepidicella xavieri (1) | | | | | | | | | +--Burkholderiaceae (36) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (3) | | | | | | | | | | | +--Cupriavidus basilensis (3) | | | | | | | | | | | +--Burkholderia sp. JPY461 (1) | | | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | | | +--Burkholderia sp. NKMU-JPY345 (6) | | | | | | | | | | | +--Burkholderia graminis C4D1M (3) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-33 (1) | | | | | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | | | +--Burkholderia sp. OLGA172 (1) | | | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (5) | | | | | | | | | | | +--Candidatus Burkholderia verschuerenii (7) | | | | | | | | | +--unclassifiedBurkholderiales (2) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (2) | | | | | | | | | | | +--Rhizobacter sp. Root1221 (2) | | | | | | | | | +--Oxalobacteraceae (1) | | | | | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | | | | | +--Comamonadaceae (29) | | | | | | | | | | | +--Limnohabitans sp. T6-5 (1) | | | | | | | | | | | +--CandidatusSymbiobacter (10) | | | | | | | | | | | | | +--Candidatus Symbiobacter mobilis CR (10) | | | | | | | | | | | +--Polaromonas sp. JS666 (2) | | | | | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | | | | | +--Acidovorax temperans (1) | | | | | | | | | | | +--Pelomonas saccharophila (3) | | | | | | | | | | | +--Rhodoferax (5) | | | | | | | | | | | | | +--Rhodoferax antarcticus ANT.BR (5) | | | | | | | | | | | +--Variovorax paradoxus (6) | | | | | | | | | +--Sutterellaceae (11) | | | | | | | | | +--Sutterella (11) | | | | | | | | | +--Sutterella wadsworthensis HGA0223 (3) | | | | | | | | | +--Sutterella sp. CAG:521 (2) | | | | | | | | | +--Sutterella wadsworthensis 2_1_59BFAA (6) | | | | | | | +--Ferrovales (1) | | | | | | | | | +--Ferrovaceae (1) | | | | | | | | | +--Ferrovum sp. Z-31 (1) | | | | | | | +--Rhodocyclales (7) | | | | | | | | | +--Rhodocyclaceae (7) | | | | | | | | | +--Thauera sp. 27 (1) | | | | | | | | | +--Azoarcus indigens (1) | | | | | | | | | +--Thauera (1) | | | | | | | | | | | +--Thauera terpenica 58Eu (1) | | | | | | | | | +--Candidatus Propionivibrio aalborgensis (1) | | | | | | | | | +--Azoarcus sp. KH32C (1) | | | | | | | | | +--Denitratisoma oestradiolicum (1) | | | | | | | | | +--Azoarcus sp. NSC3 (1) | | | | | | | +--Neisseriales (15) | | | | | | | | | +--Neisseriaceae (15) | | | | | | | | | +--Vitreoscilla filiformis (15) | | | | | | | +--Nitrosomonadales (5) | | | | | | | +--Nitrosomonadaceae (5) | | | | | | | +--Nitrosospira sp. Nsp1 (1) | | | | | | | +--Nitrosomonas europaea ATCC 19718 (2) | | | | | | | +--Nitrosomonas (1) | | | | | | | | | +--Nitrosomonas cryotolerans ATCC 49181 (1) | | | | | | | +--Nitrosomonas sp. Nm51 (1) | | | | | +--delta proteobacterium NaphS2 (5) | | | | | +--gamma proteobacterium BW-2 (3) | | | | | +--Olavius algarvensis Delta 1 endosymbiont (2) | | | +--Thermotogota (2) | | | | | +--Thermotogae (2) | | | | | +--Kosmotogales (1) | | | | | | | +--Kosmotogaceae (1) | | | | | | | +--Kosmotoga (1) | | | | | | | +--Kosmotoga sp. (1) | | | | | +--Petrotogales (1) | | | | | +--Petrotogaceae (1) | | | | | +--Tepiditoga spiralis (1) | | | +--Lentisphaerae (1) | | | | | +--Lentisphaerales (1) | | | | | +--Lentisphaeraceae (1) | | | | | +--Lentisphaera araneosa HTCC2155 (1) | | | +--Myxococcota (4) | | | | | +--Myxococcia (3) | | | | | | | +--Myxococcales (3) | | | | | | | +--Myxococcales bacterium (1) | | | | | | | +--Cystobacterineae (2) | | | | | | | +--Archangiaceae (2) | | | | | | | +--Vitiosangium (2) | | | | | | | +--Vitiosangium sp. (strain GDMCC 1.1324) (2) | | | | | +--Polyangia (1) | | | | | +--Haliangiales (1) | | | | | +--Kofleriaceae (1) | | | | | +--Kofleriaceae bacterium (1) | | | +--Spirochaetes (15) | | | | | +--Spirochaetia (12) | | | | | | | +--Spirochaetales (12) | | | | | | | +--Spirochaetaceae (12) | | | | | | | +--Spirochaeta (1) | | | | | | | | | +--Spirochaeta africana DSM 8902 (1) | | | | | | | +--Marispirochaeta aestuarii (1) | | | | | | | +--Salinispira pacifica (10) | | | | | +--Spirochaetales (3) | | | | | +--Spirochaetaceae (3) | | | | | +--Spirochaeta sp. Buddy (1) | | | | | +--Spirochaeta isovalerica (1) | | | | | +--Spirochaeta sp. Grapes (1) | | | +--Synergistetes (7) | | | | | +--Synergistia (7) | | | | | +--Synergistales (7) | | | | | +--Synergistaceae (7) | | | | | +--Synergistes jonesii (2) | | | | | +--Cloacibacillus (5) | | | | | +--Cloacibacillus evryensis DSM 19522 (5) | | | +--Firmicutes bacterium LX-B (1) | | | +--Verrucomicrobia (9) | | | | | +--Opitutae (1) | | | | | | | +--Puniceicoccales (1) | | | | | | | +--Puniceicoccaceae (1) | | | | | | | +--Pelagicoccus mobilis (1) | | | | | +--Spartobacteria (6) | | | | | | | +--Chthoniobacter flavus Ellin428 (6) | | | | | +--Verrucomicrobiae (2) | | | | | +--Verrucomicrobiales (2) | | | | | +--Verrucomicrobiaceae (2) | | | | | +--Haloferula rosea (2) | | | +--Terrabacteriagroup (1408) | | | | | +--Actinobacteria (7) | | | | | | | +--Coriobacteriia (1) | | | | | | | | | +--Coriobacteriales (1) | | | | | | | | | +--Atopobiaceae (1) | | | | | | | | | +--Olsenella (1) | | | | | | | | | +--Olsenella profusa F0195 (1) | | | | | | | +--Actinobacteria (6) | | | | | | | +--Streptomycetales (1) | | | | | | | | | +--Streptomycetaceae (1) | | | | | | | | | +--Streptomyces pluripotens (1) | | | | | | | +--Corynebacteriales (2) | | | | | | | | | +--Corynebacteriaceae (1) | | | | | | | | | | | +--Corynebacterium (1) | | | | | | | | | | | +--Corynebacterium freneyi DNF00450 (1) | | | | | | | | | +--Gordoniaceae (1) | | | | | | | | | +--Gordonia (1) | | | | | | | | | +--Gordonia hirsuta DSM 44140 = NBRC 16056 (1) | | | | | | | +--Micrococcales (3) | | | | | | | +--Micrococcaceae (3) | | | | | | | +--Arthrobacter (1) | | | | | | | | | +--Arthrobacter crystallopoietes BAB-32 (1) | | | | | | | +--Paeniglutamicibacter (1) | | | | | | | | | +--Paeniglutamicibacter gangotriensis Lz1y (1) | | | | | | | +--Arthrobacter sp. PAMC 25486 (1) | | | | | +--Deinococcota (1) | | | | | | | +--Deinococci (1) | | | | | | | +--Trueperales (1) | | | | | | | +--Trueperaceae (1) | | | | | | | +--Truepera (1) | | | | | | | +--Truepera sp. (1) | | | | | +--Chloroflexota (1) | | | | | | | +--Thermoflexia (1) | | | | | | | +--Thermoflexales (1) | | | | | | | +--Thermoflexales bacterium (1) | | | | | +--Cyanobacteriota/Melainabacteriagroup (17) | | | | | | | +--Cyanobacteriota (17) | | | | | | | +--Cyanophyceae (14) | | | | | | | | | +--Leptolyngbyales (7) | | | | | | | | | | | +--Leptolyngbyaceae (7) | | | | | | | | | | | +--Stenomitos (2) | | | | | | | | | | | | | +--Stenomitos frigidus ULC18 (2) | | | | | | | | | | | +--Leptolyngbyagroup (4) | | | | | | | | | | | | | +--Leptolyngbya (4) | | | | | | | | | | | | | +--Leptolyngbya sp. Cla-17 (2) | | | | | | | | | | | | | +--Leptolyngbya sp. FACHB-321 (1) | | | | | | | | | | | | | +--Leptolyngbya cf. ectocarpi LEGE 11479 (1) | | | | | | | | | | | +--Phormidesmis (1) | | | | | | | | | | | +--Phormidesmis priestleyi ULC007 (1) | | | | | | | | | +--Oculatellales (2) | | | | | | | | | | | +--Oculatellaceae (2) | | | | | | | | | | | +--Oculatella (2) | | | | | | | | | | | +--Oculatella sp. FACHB-28 (1) | | | | | | | | | | | +--Oculatella sp. LEGE 06141 (1) | | | | | | | | | +--Nodosilineales (3) | | | | | | | | | | | +--Nodosilineaceae (3) | | | | | | | | | | | +--Nodosilinea (3) | | | | | | | | | | | +--Nodosilinea sp. LEGE 07088 (3) | | | | | | | | | +--Nostocales (1) | | | | | | | | | | | +--Calotrichaceae (1) | | | | | | | | | | | +--Calothrix (1) | | | | | | | | | | | +--Calothrix sp. NIES-4101 (1) | | | | | | | | | +--Oscillatoriophycideae (1) | | | | | | | | | +--Oscillatoriales (1) | | | | | | | | | +--Oscillatoriaceae (1) | | | | | | | | | +--Oscillatoria (1) | | | | | | | | | +--Oscillatoria sp. FACHB-1407 (1) | | | | | | | +--Cyanobacteria bacterium FACHB-502 (3) | | | | | +--Cyanobacteria/Melainabacteriagroup (8) | | | | | | | +--Cyanobacteria (8) | | | | | | | +--Synechococcales (8) | | | | | | | +--Leptolyngbyaceae (8) | | | | | | | +--Halomicronema (3) | | | | | | | | | +--Halomicronema hongdechloris C2206 (3) | | | | | | | +--Leptolyngbya sp. Heron Island J (1) | | | | | | | +--Leptolyngbya sp. 'hensonii' (4) | | | | | +--Actinomycetota (27) | | | | | | | +--Acidimicrobiia (1) | | | | | | | | | +--Acidimicrobiia bacterium (1) | | | | | | | +--Actinomycetes (26) | | | | | | | +--Geodermatophilales (1) | | | | | | | | | +--Geodermatophilaceae (1) | | | | | | | | | +--Geodermatophilus (1) | | | | | | | | | +--Geodermatophilus sp. DF01_2 (1) | | | | | | | +--Mycobacteriales (1) | | | | | | | | | +--Gordoniaceae (1) | | | | | | | | | +--Gordonia asplenii (1) | | | | | | | +--Kitasatosporales (13) | | | | | | | | | +--Streptomycetaceae (13) | | | | | | | | | +--Streptomyces (13) | | | | | | | | | +--Streptomyces sp. SID10815 (4) | | | | | | | | | +--Streptomyces sp. NA02950 (7) | | | | | | | | | +--Streptomyces sp. TLI_235 (1) | | | | | | | | | +--Streptomyces sp. ISL-10 (1) | | | | | | | +--Frankiales (1) | | | | | | | | | +--Frankiaceae (1) | | | | | | | | | +--Parafrankia soli (1) | | | | | | | +--Streptosporangiales (2) | | | | | | | | | +--Streptosporangiaceae (2) | | | | | | | | | +--Sinosporangium siamense (1) | | | | | | | | | +--Nonomuraea phyllanthi (1) | | | | | | | +--Micrococcales (8) | | | | | | | +--Micrococcaceae (7) | | | | | | | | | +--Arthrobacter wenxiniae (1) | | | | | | | | | +--Arthrobacter cavernae (1) | | | | | | | | | +--Paenarthrobacter (1) | | | | | | | | | | | +--Paenarthrobacter sp. YJN-5 (1) | | | | | | | | | +--Glutamicibacter (2) | | | | | | | | | | | +--Glutamicibacter sp. BW77 (2) | | | | | | | | | +--Nesterenkonia sedimenti (1) | | | | | | | | | +--Nesterenkonia alkaliphila (1) | | | | | | | +--Microbacteriaceae (1) | | | | | | | +--Arenivirga flava (1) | | | | | +--Firmicutes (582) | | | | | | | +--Firmicutes bacterium CAG:536 (1) | | | | | | | +--Limnochordia (2) | | | | | | | | | +--Limnochordales (2) | | | | | | | | | +--Limnochordaceae (2) | | | | | | | | | +--Limnochorda pilosa (2) | | | | | | | +--Firmicutes bacterium CAG:272 (2) | | | | | | | +--Erysipelotrichia (34) | | | | | | | | | +--Erysipelotrichales (34) | | | | | | | | | +--Erysipelotrichaceae (34) | | | | | | | | | +--Turicibacter sp. H121 (1) | | | | | | | | | +--Faecalibaculum rodentium (28) | | | | | | | | | +--unclassifiedErysipelotrichaceae (1) | | | | | | | | | | | +--Erysipelotrichaceae bacterium MTC7 (1) | | | | | | | | | +--Erysipelothrix larvae (3) | | | | | | | | | +--Catenibacterium (1) | | | | | | | | | +--Catenibacterium sp. CAG:290 (1) | | | | | | | +--Clostridia (203) | | | | | | | | | +--Thermoanaerobacterales (19) | | | | | | | | | | | +--Thermoanaerobacteraceae (19) | | | | | | | | | | | +--Thermanaeromonas (6) | | | | | | | | | | | | | +--Thermanaeromonas toyohensis ToBE (6) | | | | | | | | | | | +--Thermacetogenium (13) | | | | | | | | | | | +--Thermacetogenium phaeum DSM 12270 (13) | | | | | | | | | +--Halanaerobiales (4) | | | | | | | | | | | +--Halobacteroidaceae (4) | | | | | | | | | | | +--Halobacteroides (4) | | | | | | | | | | | +--Halobacteroides halobius DSM 5150 (4) | | | | | | | | | +--Clostridiales (180) | | | | | | | | | +--Ruminococcaceae (3) | | | | | | | | | | | +--Ruminiclostridium (1) | | | | | | | | | | | | | +--[Clostridium] straminisolvens JCM 21531 (1) | | | | | | | | | | | +--Faecalibacterium (2) | | | | | | | | | | | +--Faecalibacterium sp. CAG:74 (2) | | | | | | | | | +--Peptostreptococcaceae (9) | | | | | | | | | | | +--Peptoclostridium (5) | | | | | | | | | | | | | +--Peptoclostridium acidaminophilum DSM 3953 (5) | | | | | | | | | | | +--Terrisporobacter othiniensis (1) | | | | | | | | | | | +--unclassifiedPeptostreptococcaceae (3) | | | | | | | | | | | +--Peptostreptococcaceae bacterium oral taxon 113 str. W5053 (3) | | | | | | | | | +--Eubacteriaceae (16) | | | | | | | | | | | +--Eubacteriaceae bacterium CHKCI004 (2) | | | | | | | | | | | +--Eubacterium sp. 68-3-10 (6) | | | | | | | | | | | +--Eubacterium sp. 14-2 (1) | | | | | | | | | | | +--Acetobacterium (1) | | | | | | | | | | | | | +--Acetobacterium woodii DSM 1030 (1) | | | | | | | | | | | +--Eubacterium (6) | | | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (2) | | | | | | | | | | | +--Eubacterium sp. CAG:38 (1) | | | | | | | | | | | +--Eubacterium dolichum CAG:375 (3) | | | | | | | | | +--Clostridiaceae (52) | | | | | | | | | | | +--Clostridium sp. BL8 (4) | | | | | | | | | | | +--Clostridium (15) | | | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (3) | | | | | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (2) | | | | | | | | | | | | | +--Clostridium sp. CAG:265 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:307 (1) | | | | | | | | | | | | | +--Clostridium argentinense CDC 2741 (2) | | | | | | | | | | | | | +--Clostridium collagenovorans DSM 3089 (2) | | | | | | | | | | | | | +--Clostridium tepidiprofundi DSM 19306 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:964 (1) | | | | | | | | | | | | | +--Clostridium magnum DSM 2767 (2) | | | | | | | | | | | +--Geosporobacter ferrireducens (2) | | | | | | | | | | | +--Caldisalinibacter kiritimatiensis (3) | | | | | | | | | | | +--Paramaledivibacter (3) | | | | | | | | | | | | | +--Paramaledivibacter caminithermalis DSM 15212 (3) | | | | | | | | | | | +--Thermobrachium (1) | | | | | | | | | | | | | +--Thermobrachium celere DSM 8682 (1) | | | | | | | | | | | +--Lactonifactor (8) | | | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (8) | | | | | | | | | | | +--Hathewaya (1) | | | | | | | | | | | | | +--Hathewaya proteolytica DSM 3090 (1) | | | | | | | | | | | +--Fervidicella (2) | | | | | | | | | | | | | +--Fervidicella metallireducens AeB (2) | | | | | | | | | | | +--Clostridium amylolyticum (2) | | | | | | | | | | | +--Clostridium sp. Maddingley MBC34-26 (2) | | | | | | | | | | | +--Clostridium oryzae (2) | | | | | | | | | | | +--Clostridium sp. HMP27 (1) | | | | | | | | | | | +--Clostridium sp. FS41 (2) | | | | | | | | | | | +--Lutispora (4) | | | | | | | | | | | +--Lutispora thermophila DSM 19022 (4) | | | | | | | | | +--Clostridialesincertaesedis (9) | | | | | | | | | | | +--ClostridialesFamilyXVI.IncertaeSedis (5) | | | | | | | | | | | | | +--Carboxydocella (5) | | | | | | | | | | | | | +--Carboxydocella sporoproducens DSM 16521 (5) | | | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (4) | | | | | | | | | | | +--Eubacterium infirmum F0142 (1) | | | | | | | | | | | +--Eubacterium nodatum ATCC 33099 (3) | | | | | | | | | +--Lachnospiraceae (59) | | | | | | | | | | | +--Blautia sp. An249 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium M18-1 (3) | | | | | | | | | | | +--Blautia sp. YL58 (4) | | | | | | | | | | | +--Lachnoclostridium sp. An131 (2) | | | | | | | | | | | +--Anaerobium acetethylicum (1) | | | | | | | | | | | +--Dorea (4) | | | | | | | | | | | | | +--Dorea sp. D27 (3) | | | | | | | | | | | | | +--Dorea sp. CAG:317 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (1) | | | | | | | | | | | +--Anaerocolumna (1) | | | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (1) | | | | | | | | | | | +--Pseudobutyrivibrio (1) | | | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (1) | | | | | | | | | | | +--Roseburia (2) | | | | | | | | | | | | | +--Roseburia sp. CAG:50 (1) | | | | | | | | | | | | | +--Roseburia sp. CAG:18 (1) | | | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | | | | | +--Butyrivibrio (1) | | | | | | | | | | | | | +--Butyrivibrio crossotus CAG:259 (1) | | | | | | | | | | | +--Anaerosporobacter (5) | | | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (5) | | | | | | | | | | | +--Parasporobacterium (5) | | | | | | | | | | | | | +--Parasporobacterium paucivorans DSM 15970 (5) | | | | | | | | | | | +--Anaerostipes sp. 992a (18) | | | | | | | | | | | +--Lachnoclostridium sp. An14 (2) | | | | | | | | | | | +--Lachnoclostridium sp. An169 (1) | | | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | | | +--Herbinix luporum (1) | | | | | | | | | | | +--Blautia (3) | | | | | | | | | | | +--Blautia sp. CAG:37 (1) | | | | | | | | | | | +--Blautia sp. CAG:257 (1) | | | | | | | | | | | +--Blautia hydrogenotrophica CAG:147 (1) | | | | | | | | | +--unclassifiedClostridiales (6) | | | | | | | | | | | +--Clostridiales bacterium CHKCI001 (1) | | | | | | | | | | | +--Proteiniborus sp. DW1 (3) | | | | | | | | | | | +--Clostridiales bacterium PH28_bin88 (1) | | | | | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | | | | | +--Peptococcaceae (26) | | | | | | | | | +--Desulfitobacterium (3) | | | | | | | | | | | +--Desulfitobacterium dichloroeliminans LMG P-21439 (3) | | | | | | | | | +--Desulfotomaculum (3) | | | | | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (3) | | | | | | | | | +--Desulfonispora (1) | | | | | | | | | | | +--Desulfonispora thiosulfatigenes DSM 11270 (1) | | | | | | | | | +--Desulfotomaculum copahuensis (1) | | | | | | | | | +--Desulfosporosinus sp. OL (3) | | | | | | | | | +--Desulfosporosinus sp. Tol-M (1) | | | | | | | | | +--Desulfotomaculum ferrireducens (13) | | | | | | | | | +--Peptococcaceae bacterium SCADC1_2_3 (1) | | | | | | | +--Bacilli (305) | | | | | | | | | +--Lactobacillales (67) | | | | | | | | | | | +--Streptococcaceae (12) | | | | | | | | | | | | | +--Streptococcus varani (12) | | | | | | | | | | | +--Carnobacteriaceae (22) | | | | | | | | | | | | | +--Atopostipes (3) | | | | | | | | | | | | | | | +--Atopostipes suicloacalis DSM 15692 (3) | | | | | | | | | | | | | +--Marinilactibacillus sp. 15R (3) | | | | | | | | | | | | | +--Dolosigranulum (3) | | | | | | | | | | | | | | | +--Dolosigranulum pigrum ATCC 51524 (3) | | | | | | | | | | | | | +--Alloiococcus (11) | | | | | | | | | | | | | | | +--Alloiococcus otitis ATCC 51267 (11) | | | | | | | | | | | | | +--Carnobacterium sp. CP1 (2) | | | | | | | | | | | +--Enterococcaceae (12) | | | | | | | | | | | | | +--Enterococcus (5) | | | | | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (2) | | | | | | | | | | | | | | | +--Enterococcus pallens ATCC BAA-351 (1) | | | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | | | +--Tetragenococcus (3) | | | | | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (3) | | | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (4) | | | | | | | | | | | +--Lactobacillaceae (19) | | | | | | | | | | | | | +--Lactobacillus (19) | | | | | | | | | | | | | +--Lactobacillus collinoides DSM 20515 = JCM 1123 (1) | | | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | | | +--Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 (1) | | | | | | | | | | | | | +--Lactobacillus frumenti DSM 13145 (2) | | | | | | | | | | | | | +--Lactobacillus manihotivorans DSM 13343 = JCM 12514 (1) | | | | | | | | | | | | | +--Lactobacillus panis DSM 6035 (2) | | | | | | | | | | | | | +--Lactobacillus mucosae LM1 (2) | | | | | | | | | | | | | +--Lactobacilluscoryniformis (2) | | | | | | | | | | | | | | | +--Lactobacillus coryniformis subsp. coryniformis CECT 5711 (2) | | | | | | | | | | | | | +--Lactobacillus similis DSM 23365 = JCM 2765 (1) | | | | | | | | | | | | | +--Lactobacillus perolens DSM 12744 (1) | | | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (2) | | | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (3) | | | | | | | | | | | +--Aerococcaceae (2) | | | | | | | | | | | +--Globicatella sp. HMSC072A10 (2) | | | | | | | | | +--Bacillales (236) | | | | | | | | | | | +--Staphylococcaceae (2) | | | | | | | | | | | | | +--Staphylococcus sp. HGB0015 (2) | | | | | | | | | | | +--Alicyclobacillaceae (13) | | | | | | | | | | | | | +--Alicyclobacillus (3) | | | | | | | | | | | | | | | +--Alicyclobacillus acidoterrestris ATCC 49025 (3) | | | | | | | | | | | | | +--Alicyclobacillus sp. USBA-503 (8) | | | | | | | | | | | | | +--Tumebacillus flagellatus (2) | | | | | | | | | | | +--Planococcaceae (1) | | | | | | | | | | | | | +--Bhargavaea (1) | | | | | | | | | | | | | +--Bhargavaea cecembensis DSE10 (1) | | | | | | | | | | | +--Bacillaceae (124) | | | | | | | | | | | | | +--Salimicrobium jeotgali (2) | | | | | | | | | | | | | +--Bacillus sp. SGD-V-76 (2) | | | | | | | | | | | | | +--Virgibacillus sp. LM2416 (2) | | | | | | | | | | | | | +--Halobacillus sp. BBL2006 (1) | | | | | | | | | | | | | +--Bacillus sp. FJAT-27916 (8) | | | | | | | | | | | | | +--Bacillus sp. FJAT-27997 (3) | | | | | | | | | | | | | +--Fictibacillus (1) | | | | | | | | | | | | | | | +--Fictibacillus macauensis ZFHKF-1 (1) | | | | | | | | | | | | | +--Bacillus sp. FJAT-27986 (1) | | | | | | | | | | | | | +--Bacillus solimangrovi (1) | | | | | | | | | | | | | +--Anaerobacillus sp. NB2006 (2) | | | | | | | | | | | | | +--Amphibacillus (2) | | | | | | | | | | | | | | | +--Amphibacillus xylanus NBRC 15112 (2) | | | | | | | | | | | | | +--Paraliobacillus sp. PM-2 (2) | | | | | | | | | | | | | +--Bacillus sp. MUM 13 (4) | | | | | | | | | | | | | +--Tepidibacillus decaturensis (1) | | | | | | | | | | | | | +--Quasibacillus thermotolerans (5) | | | | | | | | | | | | | +--Lysinibacillus (5) | | | | | | | | | | | | | | | +--Lysinibacillus manganicus DSM 26584 (1) | | | | | | | | | | | | | | | +--Lysinibacillus sinduriensis BLB-1 = JCM 15800 (2) | | | | | | | | | | | | | | | +--Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 (2) | | | | | | | | | | | | | +--Bacillus (74) | | | | | | | | | | | | | | | +--Bacillus infantis NRRL B-14911 (1) | | | | | | | | | | | | | | | +--Bacillus coahuilensis p1.1.43 (1) | | | | | | | | | | | | | | | +--Bacillus smithii 7_3_47FAA (66) | | | | | | | | | | | | | | | +--Bacillus akibai JCM 9157 (1) | | | | | | | | | | | | | | | +--Bacillus azotoformans LMG 9581 (2) | | | | | | | | | | | | | | | +--Bacillus wakoensis JCM 9140 (2) | | | | | | | | | | | | | | | +--Bacillus vireti LMG 21834 (1) | | | | | | | | | | | | | +--Parageobacillus (3) | | | | | | | | | | | | | | | +--Parageobacillus caldoxylosilyticus NBRC 107762 (3) | | | | | | | | | | | | | +--Anoxybacillus sp. B7M1 (1) | | | | | | | | | | | | | +--Bacillus sp. FJAT-26390 (1) | | | | | | | | | | | | | +--Bacillus sp. SJS (1) | | | | | | | | | | | | | +--Pontibacillus (1) | | | | | | | | | | | | | | | +--Pontibacillus litoralis JSM 072002 (1) | | | | | | | | | | | | | +--Gracilibacillus (1) | | | | | | | | | | | | | +--Gracilibacillus halophilus YIM-C55.5 (1) | | | | | | | | | | | +--Paenibacillaceae (85) | | | | | | | | | | | | | +--Paenibacillaceae bacterium GAS479 (2) | | | | | | | | | | | | | +--Paenibacillus sp. Leaf72 (1) | | | | | | | | | | | | | +--Paenibacillus darwinianus (3) | | | | | | | | | | | | | +--Paenibacillus ferrarius (1) | | | | | | | | | | | | | +--Paenibacillus sp. IHBB 10380 (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL R5-0912 (2) | | | | | | | | | | | | | +--Paenibacillus yonginensis (24) | | | | | | | | | | | | | +--Paenibacillus sp. TCA20 (1) | | | | | | | | | | | | | +--Paenibacillus aquistagni (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0331 (4) | | | | | | | | | | | | | +--Paenibacillus swuensis (2) | | | | | | | | | | | | | +--Paenibacillus sp. 32O-W (4) | | | | | | | | | | | | | +--Paenibacillus (6) | | | | | | | | | | | | | | | +--Paenibacillus mucilaginosus 3016 (1) | | | | | | | | | | | | | | | +--Paenibacillus popilliae ATCC 14706 (1) | | | | | | | | | | | | | | | +--Paenibacillus uliginis N3/975 (3) | | | | | | | | | | | | | | | +--Paenibacillus dendritiformis C454 (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL H8-0548 (3) | | | | | | | | | | | | | +--Paenibacillus sp. LPB0068 (1) | | | | | | | | | | | | | +--Paenibacillus sp. UNCCL117 (2) | | | | | | | | | | | | | +--Paenibacillus tyrfis (2) | | | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0357 (1) | | | | | | | | | | | | | +--Aneurinibacillusgroup (7) | | | | | | | | | | | | | | | +--Aneurinibacillus sp. XH2 (7) | | | | | | | | | | | | | +--Brevibacillus (17) | | | | | | | | | | | | | +--Brevibacillus panacihumi W25 (17) | | | | | | | | | | | +--unclassifiedBacillales (2) | | | | | | | | | | | | | +--Acidibacillus ferrooxidans (2) | | | | | | | | | | | +--Thermoactinomycetaceae (9) | | | | | | | | | | | +--Novibacillus thermophilus (9) | | | | | | | | | +--unclassifiedBacilli (2) | | | | | | | | | +--Bacilli bacterium VT-13-104 (2) | | | | | | | +--Firmicutes bacterium CAG:137 (2) | | | | | | | +--Firmicutes bacterium CAG:345 (1) | | | | | | | +--Negativicutes (17) | | | | | | | | | +--Selenomonadales (13) | | | | | | | | | | | +--Sporomusaceae (13) | | | | | | | | | | | +--Anaerosporomusa subterranea (4) | | | | | | | | | | | +--Sporomusa (9) | | | | | | | | | | | +--Sporomusa sphaeroides DSM 2875 (9) | | | | | | | | | +--Veillonellales (4) | | | | | | | | | +--Veillonellaceae (4) | | | | | | | | | +--Dialister (3) | | | | | | | | | | | +--Dialister succinatiphilus YIT 11850 (3) | | | | | | | | | +--Megasphaera (1) | | | | | | | | | +--Megasphaera cerevisiae DSM 20462 (1) | | | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | | | +--Tissierellia (13) | | | | | | | | | +--Tissierellales (11) | | | | | | | | | | | +--Sporanaerobacter sp. PP17-6a (1) | | | | | | | | | | | +--Tissierellaceae (9) | | | | | | | | | | | | | +--Tissierella (9) | | | | | | | | | | | | | +--Tissierella praeacuta DSM 18095 (9) | | | | | | | | | | | +--Peptoniphilaceae (1) | | | | | | | | | | | +--Helcococcus (1) | | | | | | | | | | | +--Helcococcus kunzii ATCC 51366 (1) | | | | | | | | | +--unclassifiedTissierellia (2) | | | | | | | | | +--Tissierellia bacterium KA00581 (1) | | | | | | | | | +--[Clostridium] ultunense Esp (1) | | | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | +--Tenericutes (1) | | | | | | | +--Mollicutes (1) | | | | | | | +--Mycoplasmatales (1) | | | | | | | +--Mycoplasmataceae (1) | | | | | | | +--Mycoplasma (1) | | | | | | | +--Mycoplasma sp. CAG:956 (1) | | | | | +--Bacillota (764) | | | | | +--Firmicutes bacterium AF12-30 (2) | | | | | +--Clostridia (293) | | | | | | | +--Moorellales (11) | | | | | | | | | +--Moorellaceae (6) | | | | | | | | | | | +--Thermanaeromonas (6) | | | | | | | | | | | +--Thermanaeromonas sp. C210 (6) | | | | | | | | | +--Calderihabitantaceae (5) | | | | | | | | | +--Calderihabitans maritimus (5) | | | | | | | +--Thermoanaerobacterales (13) | | | | | | | | | +--Thermoanaerobacteraceae (13) | | | | | | | | | +--Thermoanaerobacterium (3) | | | | | | | | | | | +--Thermoanaerobacterium sp. RBIITD (3) | | | | | | | | | +--Thermodesulfitimonas autotrophica (1) | | | | | | | | | +--Gelria (3) | | | | | | | | | | | +--Gelria sp. Kuro-4 (3) | | | | | | | | | +--Aceticella autotrophica (1) | | | | | | | | | +--Calorimonas adulescens (1) | | | | | | | | | +--Thermoanaerobacteraceae bacterium SP2 (4) | | | | | | | +--Peptostreptococcales (22) | | | | | | | | | +--Anaerovoracaceae (2) | | | | | | | | | | | +--Aminipila luticellarii (2) | | | | | | | | | +--Thermotaleaceae (2) | | | | | | | | | | | +--Marinisporobacter balticus (2) | | | | | | | | | +--Natronincolaceae (14) | | | | | | | | | | | +--Alkaliphilus pronyensis (1) | | | | | | | | | | | +--Alkaliphilus serpentinus (1) | | | | | | | | | | | +--Serpentinicella alkaliphila (1) | | | | | | | | | | | +--Alkaliphilus (11) | | | | | | | | | | | +--Alkaliphilus sp. B6464 (3) | | | | | | | | | | | +--Alkaliphilus peptidifermentans DSM 18978 (5) | | | | | | | | | | | +--Alkaliphilus sp. (3) | | | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | | | +--Peptostreptococcaceae bacterium pGA-8 (1) | | | | | | | | | +--Acidaminobacteraceae (3) | | | | | | | | | +--Acidaminobacter (3) | | | | | | | | | +--Acidaminobacter hydrogenoformans DSM 2784 (3) | | | | | | | +--Eubacteriales (144) | | | | | | | | | +--Eubacterialesincertaesedis (6) | | | | | | | | | | | +--EubacterialesFamilyXII.IncertaeSedis (2) | | | | | | | | | | | | | +--Fusibacter (2) | | | | | | | | | | | | | +--Fusibacter sp. A1 (2) | | | | | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (3) | | | | | | | | | | | | | +--Sulfobacillus (3) | | | | | | | | | | | | | +--Sulfobacillus sp. hq2 (3) | | | | | | | | | | | +--EubacterialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | | | +--Sinanaerobacter chloroacetimidivorans (1) | | | | | | | | | +--Desulfallaceae (5) | | | | | | | | | | | +--Desulfoscipio (4) | | | | | | | | | | | | | +--Desulfoscipio geothermicus DSM 3669 (4) | | | | | | | | | | | +--Desulfotruncus (1) | | | | | | | | | | | +--Desulfotruncus arcticus DSM 17038 (1) | | | | | | | | | +--Desulfitobacteriaceae (6) | | | | | | | | | | | +--Desulfosporosinus (6) | | | | | | | | | | | +--Desulfosporosinus sp. HMP52 (4) | | | | | | | | | | | +--Desulfosporosinus sp. Sb-LF (2) | | | | | | | | | +--Bianqueaceae (2) | | | | | | | | | | | +--Bianquea renquensis (2) | | | | | | | | | +--Desulfotomaculaceae (3) | | | | | | | | | | | +--Pelotomaculum (3) | | | | | | | | | | | +--Pelotomaculum isophthalicicum JI (3) | | | | | | | | | +--Desulfocucumaceae (2) | | | | | | | | | | | +--Desulfocucumis palustris (2) | | | | | | | | | +--Eubacteriaceae (2) | | | | | | | | | | | +--Eubacterium (2) | | | | | | | | | | | +--Eubacterium sp. AF22-8LB (2) | | | | | | | | | +--Proteinivoraceae (2) | | | | | | | | | | | +--Alkalicella caledoniensis (2) | | | | | | | | | +--Clostridiaceae (87) | | | | | | | | | | | +--Caloramator (1) | | | | | | | | | | | | | +--Caloramator sp. E03 (1) | | | | | | | | | | | +--Clostridium liquoris (1) | | | | | | | | | | | +--Clostridium (32) | | | | | | | | | | | | | +--Clostridium sp. 'deep sea' (3) | | | | | | | | | | | | | +--Clostridium sp. chh4-2 (1) | | | | | | | | | | | | | +--Clostridium sp. CT7 (1) | | | | | | | | | | | | | +--Clostridium sp. JN-9 (3) | | | | | | | | | | | | | +--Clostridium sp. DSM 8431 (16) | | | | | | | | | | | | | +--Clostridium sp. AM58-1XD (1) | | | | | | | | | | | | | +--Clostridium sp. SM-530-WT-3G (4) | | | | | | | | | | | | | +--Clostridium sp. AM33-3 (2) | | | | | | | | | | | | | +--Clostridium sp. CAG:149 (1) | | | | | | | | | | | +--Clostridium thailandense (1) | | | | | | | | | | | +--Sarcina (1) | | | | | | | | | | | | | +--Sarcina sp. DSM 11001 (1) | | | | | | | | | | | +--Clostridium manihotivorum (25) | | | | | | | | | | | +--Clostridiaceae bacterium AF18-31LB (2) | | | | | | | | | | | +--Clostridiaceae bacterium 14S0207 (20) | | | | | | | | | | | +--Proteiniclasticum aestuarii (1) | | | | | | | | | | | +--Fonticella tunisiensis (3) | | | | | | | | | +--Oscillospiraceae (16) | | | | | | | | | | | +--Acetivibrio saccincola (1) | | | | | | | | | | | +--Ruminococcaceae bacterium YRB3002 (2) | | | | | | | | | | | +--Pseudoflavonifractor (1) | | | | | | | | | | | | | +--Pseudoflavonifractor sp. An176 (1) | | | | | | | | | | | +--Anaerobacterium chartisolvens (2) | | | | | | | | | | | +--Ruminococcus (5) | | | | | | | | | | | | | +--Ruminococcus sp. AF31-8BH (2) | | | | | | | | | | | | | +--Ruminococcus sp. AM42-11 (3) | | | | | | | | | | | +--Ruminiclostridium herbifermentans (1) | | | | | | | | | | | +--Ruminococcus difficilis (2) | | | | | | | | | | | +--Ligaoa zhengdingensis (1) | | | | | | | | | | | +--Drancourtella (1) | | | | | | | | | | | +--Drancourtella sp. An57 (1) | | | | | | | | | +--Peptococcaceae (13) | | | | | | | | | +--Desulforamulus profundi (3) | | | | | | | | | +--Peptococcaceae bacterium (5) | | | | | | | | | +--Desulfofundulus salinum (2) | | | | | | | | | +--Thermanaerosceptrum fracticalcis (3) | | | | | | | +--Halanaerobiales (7) | | | | | | | | | +--Halarsenatibacteraceae (1) | | | | | | | | | | | +--Halonatronomonas betaini (1) | | | | | | | | | +--Halanaerobialesincertaesedis (3) | | | | | | | | | | | +--Anoxybacter fermentans (3) | | | | | | | | | +--Halanaerobiaceae (3) | | | | | | | | | +--Iocasia fonsfrigidae (1) | | | | | | | | | +--Halanaerobium (2) | | | | | | | | | +--Halanaerobium sp. DL-01 (2) | | | | | | | +--Koleobacterales (2) | | | | | | | | | +--Koleobacteraceae (2) | | | | | | | | | +--Koleobacter methoxysyntrophicus (2) | | | | | | | +--Lachnospirales (94) | | | | | | | +--Lachnospiraceae (89) | | | | | | | | | +--Lachnospiraceae bacterium AM48-27BH (2) | | | | | | | | | +--Frisingicoccus caecimuris (3) | | | | | | | | | +--Parablautia intestinalis (3) | | | | | | | | | +--Lachnospiraceae bacterium XBB1006 (2) | | | | | | | | | +--Lachnospiraceae bacterium G11 (4) | | | | | | | | | +--Cuneatibacter caecimuris (3) | | | | | | | | | +--Lachnospiraceae bacterium XPB1003 (2) | | | | | | | | | +--Oribacterium (1) | | | | | | | | | | | +--Oribacterium sp. C9 (1) | | | | | | | | | +--Lachnospiraceae bacterium KH1T2 (3) | | | | | | | | | +--Anaeromicropila herbilytica (8) | | | | | | | | | +--Lachnospiraceae bacterium C7 (1) | | | | | | | | | +--Eisenbergiella massiliensis (1) | | | | | | | | | +--Mediterraneibacter butyricigenes (1) | | | | | | | | | +--Blautia argi (2) | | | | | | | | | +--Lachnotalea glycerini (3) | | | | | | | | | +--Anaerostipes rhamnosivorans (2) | | | | | | | | | +--Mediterraneibacter (2) | | | | | | | | | | | +--Mediterraneibacter gnavus (strain CC55_001C) (2) | | | | | | | | | +--Lachnotalea (2) | | | | | | | | | | | +--Lachnotalea sp. AF33-28 (2) | | | | | | | | | +--Blautia liquoris (4) | | | | | | | | | +--Acetitomaculum (6) | | | | | | | | | | | +--Acetitomaculum ruminis DSM 5522 (6) | | | | | | | | | +--Lachnospiraceae bacterium KHCPX20 (6) | | | | | | | | | +--Lachnospiraceae bacterium OF09-33XD (1) | | | | | | | | | +--Roseburia zhanii (1) | | | | | | | | | +--Coprococcus (4) | | | | | | | | | | | +--Coprococcus sp. AF21-14LB (4) | | | | | | | | | +--Roseburia (3) | | | | | | | | | | | +--Roseburia sp. OF03-24 (3) | | | | | | | | | +--Acetatifactor muris (4) | | | | | | | | | +--Herbinix hemicellulosilytica (1) | | | | | | | | | +--Lachnospiraceae bacterium XBB2008 (2) | | | | | | | | | +--Butyrivibrio (4) | | | | | | | | | | | +--Butyrivibrio sp. Su6 (2) | | | | | | | | | | | +--Butyrivibrio sp. ob235 (2) | | | | | | | | | +--Lachnospiraceae bacterium OM04-12BH (2) | | | | | | | | | +--Lachnospiraceae bacterium G41 (4) | | | | | | | | | +--Sellimonas intestinalis (1) | | | | | | | | | +--Blautia (1) | | | | | | | | | +--Blautia sp. OF03-15BH (1) | | | | | | | +--Vallitaleaceae (5) | | | | | | | +--Vallitalea pronyensis (2) | | | | | | | +--Vallitalea guaymasensis (3) | | | | | +--Dethiobacteria (2) | | | | | | | +--Dethiobacterales (2) | | | | | | | +--Dethiobacteraceae (2) | | | | | | | +--Dethiobacter (2) | | | | | | | +--Dethiobacter sp. (2) | | | | | +--Bacilli (417) | | | | | | | +--Lactobacillales (21) | | | | | | | | | +--Carnobacteriaceae (1) | | | | | | | | | | | +--Jeotgalibaca porci (1) | | | | | | | | | +--Streptococcaceae (3) | | | | | | | | | | | +--Streptococcus hillyeri (2) | | | | | | | | | | | +--Streptococcus (1) | | | | | | | | | | | +--Streptococcus downei MFe28 (1) | | | | | | | | | +--Enterococcaceae (9) | | | | | | | | | | | +--Enterococcus alcedinis (1) | | | | | | | | | | | +--Vagococcus silagei (2) | | | | | | | | | | | +--Vagococcus allomyrinae (2) | | | | | | | | | | | +--Tetragenococcus (4) | | | | | | | | | | | +--Tetragenococcus halophilus subsp. halophilus (4) | | | | | | | | | +--Lactobacillaceae (2) | | | | | | | | | | | +--Lactobacillus xujianguonis (1) | | | | | | | | | | | +--Periweissella cryptocerci (1) | | | | | | | | | +--Aerococcaceae (6) | | | | | | | | | +--Suicoccus acidiformans (5) | | | | | | | | | +--Aerococcus (1) | | | | | | | | | +--Aerococcus sp. HMSC10H05 (1) | | | | | | | +--Bacillales (396) | | | | | | | +--Alicyclobacillaceae (30) | | | | | | | | | +--Effusibacillus dendaii (1) | | | | | | | | | +--Effusibacillus lacus (1) | | | | | | | | | +--Alicyclobacillus (2) | | | | | | | | | | | +--Alicyclobacillus sp. SO9 (2) | | | | | | | | | +--Alicyclobacillus mengziensis (9) | | | | | | | | | +--Sulfoacidibacillus thermotolerans (1) | | | | | | | | | +--Kyrpidia spormannii (15) | | | | | | | | | +--Alicyclobacillaceae bacterium (1) | | | | | | | +--Planococcaceae (17) | | | | | | | | | +--Planococcus salinus (1) | | | | | | | | | +--Sporosarcina (12) | | | | | | | | | | | +--Sporosarcina sp. Te-1 (11) | | | | | | | | | | | +--Sporosarcina sp. Marseille-Q4063 (1) | | | | | | | | | +--Rummeliibacillus (3) | | | | | | | | | | | +--Rummeliibacillus sp. TYF005 (3) | | | | | | | | | +--Tetzosporium hominis (1) | | | | | | | +--Bacillaceae (216) | | | | | | | | | +--Peribacillus faecalis (5) | | | | | | | | | +--Bacillus aquiflavi (15) | | | | | | | | | +--Neobacillus thermocopriae (5) | | | | | | | | | +--Lentibacillus (7) | | | | | | | | | | | +--Lentibacillus sp. CBA3610 (1) | | | | | | | | | | | +--Lentibacillus sp. JNUCC-1 (6) | | | | | | | | | +--Mesobacillus zeae (1) | | | | | | | | | +--Alkalicoccus urumqiensis (3) | | | | | | | | | +--Peribacillus cavernae (2) | | | | | | | | | +--Psychrobacillus glaciei (3) | | | | | | | | | +--Gottfriedia endophytica (3) | | | | | | | | | +--Bacillus yapensis (3) | | | | | | | | | +--Psychrobacillus soli (3) | | | | | | | | | +--Oceanobacillus bengalensis (2) | | | | | | | | | +--Niallia endozanthoxylica (1) | | | | | | | | | +--Virgibacillus indicus (4) | | | | | | | | | +--Virgibacillus oceani (2) | | | | | | | | | +--Lysinibacillus telephonicus (5) | | | | | | | | | +--Neobacillus cucumis (2) | | | | | | | | | +--Oceanobacillus (4) | | | | | | | | | | | +--Oceanobacillus sp. J11TS1 (4) | | | | | | | | | +--Texcoconibacillus texcoconensis (1) | | | | | | | | | +--Aureibacillus halotolerans (2) | | | | | | | | | +--Lysinibacillus (5) | | | | | | | | | | | +--Lysinibacillus sp. 2017 (5) | | | | | | | | | +--Neobacillus rhizophilus (9) | | | | | | | | | +--Mesobacillus (3) | | | | | | | | | | | +--Mesobacillus boroniphilus JCM 21738 (3) | | | | | | | | | +--Lysinibacillus endophyticus (1) | | | | | | | | | +--Bacillus salacetis (1) | | | | | | | | | +--Ornithinibacillus caprae (1) | | | | | | | | | +--Pseudogracilibacillus auburnensis (3) | | | | | | | | | +--Peribacillus saganii (2) | | | | | | | | | +--Pueribacillus theae (1) | | | | | | | | | +--Ornithinibacillus halotolerans (3) | | | | | | | | | +--Fervidibacillus halotolerans (2) | | | | | | | | | +--Tepidibacillus fermentans (9) | | | | | | | | | +--Oceanobacillus zhaokaii (1) | | | | | | | | | +--Halalkalibacter oceani (10) | | | | | | | | | +--Terrilactibacillus tamarindi (2) | | | | | | | | | +--Metabacillus lacus (1) | | | | | | | | | +--Metabacillus sediminilitoris (2) | | | | | | | | | +--Bacillaceae bacterium SAS-127 (2) | | | | | | | | | +--Lysinibacillus halotolerans (2) | | | | | | | | | +--Compostibacillus humi (5) | | | | | | | | | +--Neobacillus mesonae (2) | | | | | | | | | +--Bacillus (41) | | | | | | | | | | | +--Bacillus sp. J14TS2 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-49711 (14) | | | | | | | | | | | +--Bacillus sp. 7884-1 (2) | | | | | | | | | | | +--Bacillus sp. V5-8f (1) | | | | | | | | | | | +--Bacillus sp. B1-b2 (5) | | | | | | | | | | | +--Bacillus sp. AFS041924 (5) | | | | | | | | | | | +--Bacillus sp. AFS073361 (1) | | | | | | | | | | | +--Bacillus sp. V59.32b (4) | | | | | | | | | | | +--Bacillus sp. T33-2 (1) | | | | | | | | | | | +--Bacillus sp. AFS040349 (3) | | | | | | | | | | | +--Bacillus sp. THAF10 (1) | | | | | | | | | | | +--Bacillus sp. DNRA2 (3) | | | | | | | | | +--Pseudalkalibacillus caeni (1) | | | | | | | | | +--Salicibibacter halophilus (1) | | | | | | | | | +--Calidifontibacillus/Schinkiagroup (1) | | | | | | | | | | | +--Calidifontibacillus erzurumensis (1) | | | | | | | | | +--Shouchella lonarensis (1) | | | | | | | | | +--Caldibacillus (4) | | | | | | | | | | | +--Caldibacillus debilis GB1 (4) | | | | | | | | | +--Evansella caseinilytica (2) | | | | | | | | | +--Tepidibacillus (20) | | | | | | | | | | | +--Tepidibacillus sp. HK-1 (20) | | | | | | | | | +--Weizmannia acidilactici (5) | | | | | | | +--Paenibacillaceae (116) | | | | | | | | | +--Cohnella fermenti (6) | | | | | | | | | +--Paenibacillus lemnae (2) | | | | | | | | | +--Cohnella lupini (1) | | | | | | | | | +--Paenibacillus thalictri (1) | | | | | | | | | +--Paenibacillus piri (2) | | | | | | | | | +--Paenibacillus antri (1) | | | | | | | | | +--Paenibacillus psychroresistens (1) | | | | | | | | | +--Paenibacillus apis (1) | | | | | | | | | +--Paenibacillus (37) | | | | | | | | | | | +--Paenibacillus sp. 7541 (1) | | | | | | | | | | | +--Paenibacillus sp. yr247 (1) | | | | | | | | | | | +--Paenibacillus sp. CAA11 (20) | | | | | | | | | | | +--Paenibacillus sp. J45TS6 (2) | | | | | | | | | | | +--Paenibacillus sp. GSMTC-2017 (1) | | | | | | | | | | | +--Paenibacillus sp. YN15 (1) | | | | | | | | | | | +--Paenibacillus sp. OAS669 (4) | | | | | | | | | | | +--Paenibacillus sp. N3.4 (4) | | | | | | | | | | | +--Paenibacillus sp. J2TS4 (1) | | | | | | | | | | | +--Paenibacillus sp. KS1 (2) | | | | | | | | | +--Paenibacillus agri (5) | | | | | | | | | +--Cohnella cholangitidis (2) | | | | | | | | | +--Cohnella endophytica (2) | | | | | | | | | +--Cohnella abietis (3) | | | | | | | | | +--Cohnella herbarum (3) | | | | | | | | | +--Paenibacillus monticola (1) | | | | | | | | | +--Cohnella lubricantis (2) | | | | | | | | | +--Paenibacillus oceani (3) | | | | | | | | | +--Aneurinibacillusgroup (2) | | | | | | | | | | | +--Aneurinibacillus soli (1) | | | | | | | | | | | +--Ammoniphilus (1) | | | | | | | | | | | +--Ammoniphilus sp. CFH 90114 (1) | | | | | | | | | +--Paenibacillus roseus (1) | | | | | | | | | +--Paenibacillus albus (1) | | | | | | | | | +--Paenibacillus hemerocallicola (1) | | | | | | | | | +--Cohnella terricola (1) | | | | | | | | | +--Paenibacillus baekrokdamisoli (2) | | | | | | | | | +--Paenibacillus sedimenti (1) | | | | | | | | | +--Paenibacillus foliorum (1) | | | | | | | | | +--Paenibacillus cremeus (8) | | | | | | | | | +--Fontibacillus phaseoli (1) | | | | | | | | | +--Xylanibacillus composti (4) | | | | | | | | | +--Paenibacillus algicola (1) | | | | | | | | | +--Paenibacillus sabuli (1) | | | | | | | | | +--Cohnella rhizosphaerae (1) | | | | | | | | | +--Paenibacillus solani (5) | | | | | | | | | +--Cohnella zeiphila (3) | | | | | | | | | +--Cohnella (1) | | | | | | | | | | | +--Cohnella sp. CIP 111063 (1) | | | | | | | | | +--Paenibacillus lutimineralis (1) | | | | | | | | | +--Cohnella faecalis (1) | | | | | | | | | +--Paenibacillus paeoniae (1) | | | | | | | | | +--Paenibacillus sambharensis (1) | | | | | | | | | +--Paenibacillus nasutitermitis (2) | | | | | | | | | +--Insulibacter thermoxylanivorax (2) | | | | | | | +--Sporolactobacillaceae (7) | | | | | | | | | +--Pullulanibacillus camelliae (1) | | | | | | | | | +--Sporolactobacillus shoreae (6) | | | | | | | +--Thermoactinomycetaceae (10) | | | | | | | +--Paenactinomyces guangxiensis (4) | | | | | | | +--Baia soyae (2) | | | | | | | +--Polycladospora coralii (2) | | | | | | | +--Thermoactinomyces daqus (1) | | | | | | | +--Marinithermofilum abyssi (1) | | | | | +--Negativicutes (10) | | | | | | | +--Selenomonadales (8) | | | | | | | | | +--Sporomusaceae (8) | | | | | | | | | +--Sporomusa (8) | | | | | | | | | +--Sporomusa silvacetica DSM 10669 (8) | | | | | | | +--Veillonellales (2) | | | | | | | +--Veillonellaceae (2) | | | | | | | +--Megasphaera (2) | | | | | | | +--Megasphaera sp. AM44-1BH (2) | | | | | +--Firmicutes bacterium AF36-19BH (1) | | | | | +--Bacillota bacterium (2) | | | | | +--Tissierellia (12) | | | | | | | +--Tissierellales (10) | | | | | | | | | +--Tissierellaceae (8) | | | | | | | | | | | +--Soehngenia longivitae (6) | | | | | | | | | | | +--Paratissierella segnis (2) | | | | | | | | | +--Tepidimicrobiaceae (1) | | | | | | | | | | | +--Keratinibaculum paraultunense (1) | | | | | | | | | +--Sporanaerobacteraceae (1) | | | | | | | | | +--Anaerosalibacter massiliensis (1) | | | | | | | +--Tissierelliaincertaesedis (2) | | | | | | | +--Sedimentibacter (2) | | | | | | | +--Sedimentibacter hydroxybenzoicus DSM 7310 (1) | | | | | | | +--Sedimentibacter sp. zth1 (1) | | | | | +--Erysipelotrichia (25) | | | | | +--Erysipelotrichales (25) | | | | | +--Erysipelotrichaceae (18) | | | | | | | +--Massilimicrobiota (3) | | | | | | | | | +--Massilimicrobiota sp. An134 (3) | | | | | | | +--Erysipelotrichaceae bacterium RD49 (3) | | | | | | | +--Amedibacterium intestinale (9) | | | | | | | +--Ileibacterium valens (1) | | | | | | | +--Intestinibaculum porci (2) | | | | | +--Coprobacillaceae (7) | | | | | +--Faecalibacillus faecis (3) | | | | | +--Longibaculum muris (2) | | | | | +--Thomasclavelia (2) | | | | | +--Erysipelatoclostridium sp. An173 (2) | | | +--FCBgroup (331) | | | | | +--Fibrobacteres (1) | | | | | | | +--Chitinivibrionia (1) | | | | | | | +--Chitinivibrionales (1) | | | | | | | +--Chitinivibrionaceae (1) | | | | | | | +--Chitinivibrio (1) | | | | | | | +--Chitinivibrio alkaliphilus ACht1 (1) | | | | | +--Bacteroidetes/Chlorobigroup (110) | | | | | | | +--Bacteroidetes (110) | | | | | | | +--Chitinophagia (4) | | | | | | | | | +--Chitinophagales (4) | | | | | | | | | +--Chitinophagaceae (4) | | | | | | | | | +--Niastella vici (3) | | | | | | | | | +--Cnuella takakiae (1) | | | | | | | +--Sphingobacteriia (5) | | | | | | | | | +--Sphingobacteriales (5) | | | | | | | | | +--Sphingobacteriaceae (5) | | | | | | | | | +--Pedobacter (1) | | | | | | | | | | | +--Pedobacter antarcticus 4BY (1) | | | | | | | | | +--Sphingobacterium sp. JB170 (3) | | | | | | | | | +--Sphingobacterium (1) | | | | | | | | | +--Sphingobacterium paucimobilis HER1398 (1) | | | | | | | +--Bacteroidia (68) | | | | | | | | | +--Bacteroidales (48) | | | | | | | | | | | +--Porphyromonadaceae (23) | | | | | | | | | | | | | +--Petrimonas mucosa (21) | | | | | | | | | | | | | +--Porphyromonas sp. HMSC065F10 (2) | | | | | | | | | | | +--unclassifiedBacteroidales (3) | | | | | | | | | | | | | +--Bacteroidales bacterium KA00251 (2) | | | | | | | | | | | | | +--Bacteroidales bacterium Barb7 (1) | | | | | | | | | | | +--Bacteroidaceae (9) | | | | | | | | | | | | | +--Bacteroides (9) | | | | | | | | | | | | | +--Bacteroides sp. CAG:462 (2) | | | | | | | | | | | | | +--Bacteroides sp. CAG:714 (2) | | | | | | | | | | | | | +--Bacteroides cellulosilyticus CAG:158 (1) | | | | | | | | | | | | | +--Bacteroides plebeius CAG:211 (1) | | | | | | | | | | | | | +--Bacteroides nordii CL02T12C05 (1) | | | | | | | | | | | | | +--Bacteroides sp. CAG:530 (2) | | | | | | | | | | | +--Dysgonamonadaceae (1) | | | | | | | | | | | | | +--Proteiniphilum saccharofermentans (1) | | | | | | | | | | | +--Prevotellaceae (12) | | | | | | | | | | | +--Alloprevotella (1) | | | | | | | | | | | | | +--Prevotella sp. oral taxon 473 str. F0040 (1) | | | | | | | | | | | +--Prevotella (11) | | | | | | | | | | | +--Prevotella sp. CAG:386 (1) | | | | | | | | | | | +--Prevotella sp. CAG:592 (1) | | | | | | | | | | | +--Prevotella sp. CAG:891 (1) | | | | | | | | | | | +--Prevotella sp. CAG:1058 (1) | | | | | | | | | | | +--Prevotella sp. CAG:279 (2) | | | | | | | | | | | +--Prevotella sp. CAG:520 (2) | | | | | | | | | | | +--Prevotella sp. CAG:5226 (3) | | | | | | | | | +--Marinilabiliales (20) | | | | | | | | | +--Prolixibacteraceae (1) | | | | | | | | | | | +--Tangfeifania diversioriginum (1) | | | | | | | | | +--Salinivirgaceae (11) | | | | | | | | | | | +--Salinivirga cyanobacteriivorans (11) | | | | | | | | | +--Marinilabiliaceae (8) | | | | | | | | | +--Saccharicrinis (7) | | | | | | | | | | | +--Saccharicrinis fermentans DSM 9555 = JCM 21142 (7) | | | | | | | | | +--Geofilum (1) | | | | | | | | | +--Geofilum rubicundum JCM 15548 (1) | | | | | | | +--Flavobacteriia (8) | | | | | | | | | +--Flavobacteriales (8) | | | | | | | | | +--Flavobacteriaceae (8) | | | | | | | | | +--Siansivirga (1) | | | | | | | | | | | +--Siansivirga zeaxanthinifaciens CC-SAMT-1 (1) | | | | | | | | | +--Gillisia (2) | | | | | | | | | | | +--Gillisia limnaea DSM 15749 (2) | | | | | | | | | +--Flavobacterium sp. TAB 87 (1) | | | | | | | | | +--Zunongwangia (1) | | | | | | | | | | | +--Zunongwangia atlantica 22II14-10F7 (1) | | | | | | | | | +--Algibacter sp. SK-16 (2) | | | | | | | | | +--Maribacter sp. T28 (1) | | | | | | | +--Cytophagia (21) | | | | | | | | | +--Cytophagales (21) | | | | | | | | | +--Cyclobacteriaceae (15) | | | | | | | | | | | +--Indibacter (1) | | | | | | | | | | | | | +--Indibacter alkaliphilus LW1 (1) | | | | | | | | | | | +--Echinicola (3) | | | | | | | | | | | | | +--Echinicola vietnamensis DSM 17526 (3) | | | | | | | | | | | +--Nitritalea (1) | | | | | | | | | | | | | +--Nitritalea halalkaliphila LW7 (1) | | | | | | | | | | | +--Belliella (6) | | | | | | | | | | | | | +--Belliella baltica DSM 15883 (6) | | | | | | | | | | | +--Cecembia (2) | | | | | | | | | | | | | +--Cecembia lonarensis LW9 (2) | | | | | | | | | | | +--Lunatimonas lonarensis (2) | | | | | | | | | +--Hymenobacteraceae (1) | | | | | | | | | | | +--Pontibacter ummariensis (1) | | | | | | | | | +--Flammeovirgaceae (5) | | | | | | | | | +--Flammeovirga sp. SJP92 (4) | | | | | | | | | +--Fulvivirga (1) | | | | | | | | | +--Fulvivirga imtechensis AK7 (1) | | | | | | | +--Saprospiria (4) | | | | | | | +--Saprospirales (4) | | | | | | | +--Haliscomenobacteraceae (4) | | | | | | | +--Phaeodactylibacter xiamenensis (4) | | | | | +--Bacteroidota/Chlorobiotagroup (220) | | | | | +--Balneolota (1) | | | | | | | +--Balneolia (1) | | | | | | | +--Balneolales (1) | | | | | | | +--Balneolaceae (1) | | | | | | | +--Rhodohalobacter mucosus (1) | | | | | +--Bacteroidota (219) | | | | | +--Chitinophagia (28) | | | | | | | +--Chitinophagales (28) | | | | | | | +--Chitinophagaceae (28) | | | | | | | +--Chitinophaga costaii (3) | | | | | | | +--Chitinophaga (4) | | | | | | | | | +--[Flexibacter] sp. ATCC 35208 (4) | | | | | | | +--Arachidicoccus soli (10) | | | | | | | +--Terrimonas (1) | | | | | | | | | +--Terrimonas sp. (1) | | | | | | | +--Chitinophaga tropicalis (5) | | | | | | | +--Chitinophaga oryziterrae (1) | | | | | | | +--Taibaiella (1) | | | | | | | | | +--Taibaiella sp. (1) | | | | | | | +--Chitinophaga caeni (1) | | | | | | | +--Paraflavisolibacter caeni (2) | | | | | +--Sphingobacteriia (17) | | | | | | | +--Sphingobacteriales (17) | | | | | | | +--Sphingobacteriaceae (16) | | | | | | | | | +--Pedobacter (2) | | | | | | | | | | | +--Pedobacter sp. Leaf216 (1) | | | | | | | | | | | +--Pedobacter sp. MC2016-24 (1) | | | | | | | | | +--Mucilaginibacter gotjawali (1) | | | | | | | | | +--Pedobacter cryotolerans (1) | | | | | | | | | +--Pedobacter nutrimenti (1) | | | | | | | | | +--Pedobacter hiemivivus (1) | | | | | | | | | +--Pedobacter puniceum (2) | | | | | | | | | +--Sphingobacterium (8) | | | | | | | | | +--Sphingobacterium sp. SGL-16 (8) | | | | | | | +--Sphingobacteriales bacterium UPWRP_1 (1) | | | | | +--Bacteroidia (57) | | | | | | | +--Bacteroidales (38) | | | | | | | | | +--Dysgonomonadaceae (4) | | | | | | | | | | | +--Dysgonomonas (1) | | | | | | | | | | | | | +--Dysgonomonas sp. PH5-37 (1) | | | | | | | | | | | +--Dysgonamonadaceae bacterium (3) | | | | | | | | | +--Rikenellaceae (1) | | | | | | | | | | | +--Alistipes communis (1) | | | | | | | | | +--Bacteroidales bacterium KHT7 (1) | | | | | | | | | +--Porphyromonadaceae (1) | | | | | | | | | | | +--Porphyromonas (1) | | | | | | | | | | | +--Porphyromonas sp. HMSC077F02 (1) | | | | | | | | | +--Bacteroidaceae (3) | | | | | | | | | | | +--Mediterranea (2) | | | | | | | | | | | | | +--Mediterranea sp. An20 (2) | | | | | | | | | | | +--Phocaeicola (1) | | | | | | | | | | | +--Phocaeicola coprocola CAG:162 (1) | | | | | | | | | +--Tannerellaceae (1) | | | | | | | | | | | +--Parabacteroides (1) | | | | | | | | | | | +--Parabacteroides sp. An277 (1) | | | | | | | | | +--Prevotellaceae (15) | | | | | | | | | | | +--Prevotella lacticifex (3) | | | | | | | | | | | +--Prevotella brunnea (1) | | | | | | | | | | | +--Prevotella (11) | | | | | | | | | | | +--Prevotella sp. P3-122 (11) | | | | | | | | | +--Williamwhitmaniaceae (5) | | | | | | | | | | | +--Williamwhitmania taraxaci (5) | | | | | | | | | +--Muribaculaceae (7) | | | | | | | | | +--Muribaculaceae bacterium Isolate-110 (HZI) (1) | | | | | | | | | +--Muribaculaceae bacterium Isolate-002 (NCI) (2) | | | | | | | | | +--Muribaculaceae bacterium Isolate-102 (HZI) (1) | | | | | | | | | +--Muribaculum (1) | | | | | | | | | | | +--Muribaculum sp. An287 (1) | | | | | | | | | +--Duncaniella freteri (1) | | | | | | | | | +--Muribaculaceae bacterium (1) | | | | | | | +--Marinilabiliales (19) | | | | | | | +--Prolixibacteraceae (6) | | | | | | | | | +--Prolixibacteraceae bacterium Z1-6 (3) | | | | | | | | | +--Prolixibacter (2) | | | | | | | | | | | +--Prolixibacter sp. SD074 (2) | | | | | | | | | +--Gaoshiqia sediminis (1) | | | | | | | +--Marinifilaceae (3) | | | | | | | | | +--Labilibaculum filiforme (1) | | | | | | | | | +--Ancylomarina longa (2) | | | | | | | +--Marinilabiliaceae (10) | | | | | | | +--Marinilabilia rubra (3) | | | | | | | +--Carboxylicivirga sediminis (1) | | | | | | | +--Carboxylicivirga (1) | | | | | | | | | +--Carboxylicivirga sp. M1479 (1) | | | | | | | +--Saccharicrinis carchari (1) | | | | | | | +--Alkaliflexus (4) | | | | | | | +--Alkaliflexus sp. Ai-910 (4) | | | | | +--Flavobacteriia (47) | | | | | | | +--Flavobacteriales (47) | | | | | | | +--Parvicellaceae (6) | | | | | | | | | +--Parvicella tangerina (6) | | | | | | | +--Luteibaculaceae (1) | | | | | | | | | +--Luteibaculum oceani (1) | | | | | | | +--Flavobacteriaceae (40) | | | | | | | +--Flavobacterium tibetense (8) | | | | | | | +--Flavobacterium piscinae (1) | | | | | | | +--Aquimarina (3) | | | | | | | | | +--Aquimarina sp. TRL1 (3) | | | | | | | +--Flavobacterium macacae (2) | | | | | | | +--Aequorivita (1) | | | | | | | | | +--Aequorivita sp. H23M31 (1) | | | | | | | +--Flavobacterium (7) | | | | | | | | | +--Flavobacterium sp. BFFFF2 (7) | | | | | | | +--Pustulibacterium marinum (2) | | | | | | | +--Flavobacterium faecale (5) | | | | | | | +--Aquimarina algicola (1) | | | | | | | +--Paenimyroides tangerinum (1) | | | | | | | +--Flavobacterium psychrotolerans (1) | | | | | | | +--Neptunitalea chrysea (1) | | | | | | | +--Snuella sedimenti (4) | | | | | | | +--Maribacter (3) | | | | | | | +--Maribacter sp. ACAM166 (3) | | | | | +--Cytophagia (65) | | | | | | | +--Cytophagales (65) | | | | | | | +--Cyclobacteriaceae (14) | | | | | | | | | +--Cyclobacteriaceae bacterium (14) | | | | | | | +--Reichenbachiellaceae (3) | | | | | | | | | +--Marinoscillum (3) | | | | | | | | | +--Marinoscillum furvescens DSM 4134 (3) | | | | | | | +--Hymenobacteraceae (17) | | | | | | | | | +--Pontibacter qinzhouensis (1) | | | | | | | | | +--Pontibacter diazotrophicus (3) | | | | | | | | | +--Adhaeribacter soli (1) | | | | | | | | | +--Adhaeribacter pallidiroseus (5) | | | | | | | | | +--Pontibacter (7) | | | | | | | | | +--Pontibacter sp. SGAir0037 (7) | | | | | | | +--Flammeovirgaceae (7) | | | | | | | | | +--Marinigracilibium pacificum (5) | | | | | | | | | +--Flammeovirga pectinis (1) | | | | | | | | | +--Imperialibacter (1) | | | | | | | | | +--Imperialibacter sp. EC-SDR9 (1) | | | | | | | +--Marivirgaceae (2) | | | | | | | | | +--Marivirga aurantiaca (2) | | | | | | | +--Fulvivirgaceae (15) | | | | | | | | | +--Pseudochryseolinea flava (2) | | | | | | | | | +--Fulvivirga sediminis (5) | | | | | | | | | +--Fulvivirga (8) | | | | | | | | | +--Fulvivirga sp. M361 (8) | | | | | | | +--Cytophagales bacterium (1) | | | | | | | +--Spirosomataceae (6) | | | | | | | +--Dyadobacter luteus (1) | | | | | | | +--Arcticibacterium luteifluviistationis (4) | | | | | | | +--Spirosomataceae bacterium TFI 002 (1) | | | | | +--Saprospiria (5) | | | | | +--Saprospirales (5) | | | | | +--Lewinellaceae (4) | | | | | | | +--Lewinella (3) | | | | | | | | | +--Lewinella sp. W8 (3) | | | | | | | +--Flavilitoribacter (1) | | | | | | | +--Flavilitoribacter nigricans (strain ATCC 23147 / DSM 23189 / NBRC 102662 / NCIMB 1420 / SS-2) (1) | | | | | +--Haliscomenobacteraceae (1) | | | | | +--Phaeodactylibacter luteus (1) | | | +--Bacteroidetes bacterium 3B-2 (1) | | | +--Bacteroidetes (157) | | | | | +--Sphingobacteriia (33) | | | | | | | +--Sphingobacteriales (33) | | | | | | | +--Sphingobacteriaceae (21) | | | | | | | | | +--Pedobacter rhizospharae (4) | | | | | | | | | +--Pedobacter nyackensis (1) | | | | | | | | | +--Pedobacter ginsengisoli (5) | | | | | | | | | +--Mucilaginibacter oryzae (2) | | | | | | | | | +--Pedobacter hartonius (2) | | | | | | | | | +--Pedobacter insulae (3) | | | | | | | | | +--Parapedobacter sp. 4M40 (1) | | | | | | | | | +--Parapedobacter sp. 4M29 (1) | | | | | | | | | +--Mucilaginibacter paludis DSM 18603 (2) | | | | | | | +--Sphingobacteriaceae bacterium Gsoil 524 (4) | | | | | | | +--Sphingobacteriaceae bacterium Gsoil 809 (2) | | | | | | | +--Chitinophagaceae (6) | | | | | | | +--Filimonas lacunae (1) | | | | | | | +--Flavisolibacter sp. Vu-144 (4) | | | | | | | +--Niastella yeongjuensis (1) | | | | | +--Bacteroidia (50) | | | | | | | +--Bacteroidales (50) | | | | | | | +--Marinilabiaceae (8) | | | | | | | | | +--Marinilabilia salmonicolor (8) | | | | | | | +--Porphyromonadaceae (10) | | | | | | | | | +--Tannerella sp. oral taxon 808 (1) | | | | | | | | | +--Porphyromonas asaccharolytica DSM 20707 (7) | | | | | | | | | +--Parabacteroides sp. NS31-3 (2) | | | | | | | +--Bacteroidaceae (7) | | | | | | | | | +--Bacteroides fluxus YIT 12057 (1) | | | | | | | | | +--Bacteroides thetaiotaomicron VPI-5482 (2) | | | | | | | | | +--Bacteroides coagulans (1) | | | | | | | | | +--Acetomicrobium faecale (2) | | | | | | | | | +--Bacteroides helcogenes P 36-108 (1) | | | | | | | +--Prevotellaceae (25) | | | | | | | +--Prevotella multiformis DSM 16608 (1) | | | | | | | +--Prevotella multisaccharivorax DSM 17128 (18) | | | | | | | +--Prevotella bergensis DSM 17361 (1) | | | | | | | +--Prevotella timonensis CRIS 5C-B1 (5) | | | | | +--Flavobacteriia (35) | | | | | | | +--Flavobacteriales (35) | | | | | | | +--Flavobacteriaceae (34) | | | | | | | | | +--Flavobacterium branchiophilum (4) | | | | | | | | | +--Gillisia sp. ck-I2-15 (1) | | | | | | | | | +--Zobellia galactanivorans (4) | | | | | | | | | +--Salinimicrobium sp. KMM 6320 (2) | | | | | | | | | +--Maribacter sp. ZS1-8 (1) | | | | | | | | | +--Arenibacter sp. NH36A (5) | | | | | | | | | +--Flavobacterium sp. K1 (2) | | | | | | | | | +--Arenibacter certesii (1) | | | | | | | | | +--Salegentibacter sp. HD4 (3) | | | | | | | | | +--Subsaximicrobium wynnwilliamsii (2) | | | | | | | | | +--Gelidibacter salicanalis (3) | | | | | | | | | +--Psychroflexus sediminis (4) | | | | | | | | | +--Salegentibacter flavus (1) | | | | | | | | | +--Kriegella aquimaris (1) | | | | | | | +--Cryomorphaceae (1) | | | | | | | +--Cryomorpha ignava (1) | | | | | +--Cytophagia (39) | | | | | +--Cytophagales (39) | | | | | +--Cyclobacteriaceae (6) | | | | | | | +--Echinicola pacifica (1) | | | | | | | +--Cyclobacteriaceae bacterium MIM18 (1) | | | | | | | +--Cyclobacterium marinum DSM 745 (1) | | | | | | | +--Cyclobacterium lianum (1) | | | | | | | +--Algoriphagus aquimarinus (2) | | | | | +--Cytophagaceae (20) | | | | | | | +--Leadbetterella byssophila DSM 17132 (19) | | | | | | | +--Pontibacter sp. DM9 (1) | | | | | +--Cytophagaceae bacterium ANESC-S (6) | | | | | +--Flammeovirgaceae (7) | | | | | +--Flammeovirga pacifica (4) | | | | | +--Marivirga tractuosa DSM 4126 (2) | | | | | +--Sediminitomix flava (1) | | | +--Spirochaetota (4) | | | | | +--Spirochaetia (4) | | | | | +--Spirochaetales (4) | | | | | +--Spirochaetaceae (3) | | | | | | | +--Oceanispirochaeta (3) | | | | | | | +--Oceanispirochaeta sp. M1 (3) | | | | | +--Sphaerochaetaceae (1) | | | | | +--Sphaerochaeta halotolerans (1) | | | +--Pseudomonadota (413) | | | | | +--Acidithiobacillia (7) | | | | | | | +--Acidithiobacillales (7) | | | | | | | +--Acidithiobacillaceae (7) | | | | | | | +--Acidithiobacillus sulfuriphilus (1) | | | | | | | +--Acidithiobacillus ferrianus (6) | | | | | +--Alphaproteobacteria (46) | | | | | | | +--Hyphomicrobiales (28) | | | | | | | | | +--Rhizobiales bacterium GAS113 (3) | | | | | | | | | +--Rhizobiaceae (3) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (3) | | | | | | | | | | | +--Neorhizobium (3) | | | | | | | | | | | +--Neorhizobium sp. S3-V5DH (3) | | | | | | | | | +--Roseiarcaceae (2) | | | | | | | | | | | +--Roseiarcus fermentans (2) | | | | | | | | | +--Methylobacteriaceae (17) | | | | | | | | | | | +--Methylobacterium oryzihabitans (1) | | | | | | | | | | | +--Microvirga tunisiensis (16) | | | | | | | | | +--Phyllobacteriaceae (3) | | | | | | | | | +--Mesorhizobium (3) | | | | | | | | | +--Mesorhizobium sp. L-8-10 (3) | | | | | | | +--Rhodospirillales (12) | | | | | | | | | +--Azospirillaceae (12) | | | | | | | | | +--Azospirillum thermophilum (10) | | | | | | | | | +--Nitrospirillum (2) | | | | | | | | | +--Nitrospirillum amazonense CBAmc (2) | | | | | | | +--Holosporales (3) | | | | | | | | | +--CandidatusParacaedibacteraceae (3) | | | | | | | | | +--Candidatus Finniella inopinata (3) | | | | | | | +--Sphingomonadales (1) | | | | | | | | | +--Sphingomonadaceae (1) | | | | | | | | | +--Novosphingobium endophyticum (1) | | | | | | | +--Emcibacterales (1) | | | | | | | | | +--Emcibacteraceae (1) | | | | | | | | | +--Paremcibacter congregatus (1) | | | | | | | +--Rhodobacterales (1) | | | | | | | +--Paracoccaceae (1) | | | | | | | +--Amaricoccus solimangrovi (1) | | | | | +--Gammaproteobacteria (212) | | | | | | | +--Pasteurellales (2) | | | | | | | | | +--Psittacicellaceae (2) | | | | | | | | | +--Psittacicella hinzii (2) | | | | | | | +--Enterobacterales (16) | | | | | | | | | +--Pectobacteriaceae (1) | | | | | | | | | | | +--Affinibrenneria salicis (1) | | | | | | | | | +--Enterobacteriaceae (1) | | | | | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (1) | | | | | | | | | | | +--Tenebrionibacter intestinalis (1) | | | | | | | | | +--Morganellaceae (2) | | | | | | | | | | | +--Providencia (2) | | | | | | | | | | | +--Providencia heimbachae ATCC 35613 (2) | | | | | | | | | +--Thorselliaceae (5) | | | | | | | | | | | +--Thorsellia (5) | | | | | | | | | | | +--Thorsellia anophelis DSM 18579 (5) | | | | | | | | | +--Bruguierivoracaceae (7) | | | | | | | | | +--Sodalis ligni (1) | | | | | | | | | +--Sodalis (6) | | | | | | | | | +--Sodalis-like symbiont of Philaenus spumarius (6) | | | | | | | +--Aeromonadales (5) | | | | | | | | | +--Succinivibrionaceae (5) | | | | | | | | | +--Succinivibrio (5) | | | | | | | | | +--Succinivibrio dextrinosolvens DSM 3072 (5) | | | | | | | +--Methylococcales (13) | | | | | | | | | +--Methylococcaceae (13) | | | | | | | | | +--Methyloprofundus (7) | | | | | | | | | | | +--Methyloprofundus sp. (7) | | | | | | | | | +--Methylomonas (1) | | | | | | | | | | | +--Methylomonas sp. LL1 (1) | | | | | | | | | +--Candidatus Methylospira mobilis (4) | | | | | | | | | +--Methylocaldum marinum (1) | | | | | | | +--Acidiferrobacterales (2) | | | | | | | | | +--Acidiferrobacteraceae (2) | | | | | | | | | +--Acidiferrobacter (1) | | | | | | | | | | | +--Acidiferrobacter sp. SPIII_3 (1) | | | | | | | | | +--Sulfurifustis variabilis (1) | | | | | | | +--Alteromonadales (41) | | | | | | | | | +--Pseudoalteromonadaceae (8) | | | | | | | | | | | +--Pseudoalteromonas (8) | | | | | | | | | | | +--Pseudoalteromonas sp. NBT06-2 (8) | | | | | | | | | +--Shewanellaceae (9) | | | | | | | | | | | +--Parashewanella curva (8) | | | | | | | | | | | +--Shewanella (1) | | | | | | | | | | | +--Shewanella sp. XMDDZSB0408 (1) | | | | | | | | | +--Psychromonadaceae (1) | | | | | | | | | | | +--Psychromonas (1) | | | | | | | | | | | +--Psychromonas sp. Urea-02u-13 (1) | | | | | | | | | +--Alteromonadaceae (22) | | | | | | | | | | | +--Saccharobesus litoralis (4) | | | | | | | | | | | +--Paraglaciecola (16) | | | | | | | | | | | | | +--Paraglaciecola sp. MB-3u-78 (16) | | | | | | | | | | | +--Alteromonas/Salinimonasgroup (2) | | | | | | | | | | | +--Alteromonas (1) | | | | | | | | | | | | | +--Alteromonas sp. KUL42 (1) | | | | | | | | | | | +--Alteromonas aestuariivivens (1) | | | | | | | | | +--Idiomarinaceae (1) | | | | | | | | | +--Aliidiomarina sanyensis (1) | | | | | | | +--Vibrionales (41) | | | | | | | | | +--Vibrionaceae (41) | | | | | | | | | +--Vibrio eleionomae (1) | | | | | | | | | +--Vibrio (40) | | | | | | | | | +--Vibrio tapetis subsp. tapetis (40) | | | | | | | +--Gammaproteobacteriaincertaesedis (17) | | | | | | | | | +--Kentron (15) | | | | | | | | | | | +--Candidatus Kentron sp. G (15) | | | | | | | | | +--endosymbiont of Escarpia spicata (2) | | | | | | | +--Cellvibrionales (21) | | | | | | | | | +--Microbulbiferaceae (17) | | | | | | | | | | | +--Microbulbifer (15) | | | | | | | | | | | | | +--Microbulbifer sp. THAF38 (15) | | | | | | | | | | | +--Microbulbifer rhizosphaerae (2) | | | | | | | | | +--Cellvibrionaceae (4) | | | | | | | | | +--Marinibactrum halimedae (3) | | | | | | | | | +--Exilibacterium tricleocarpae (1) | | | | | | | +--Xanthomonadales (9) | | | | | | | | | +--Rhodanobacteraceae (7) | | | | | | | | | | | +--Dyella (7) | | | | | | | | | | | +--Dyella sp. M7H15-1 (7) | | | | | | | | | +--Xanthomonadaceae (2) | | | | | | | | | +--Arenimonas (1) | | | | | | | | | | | +--Arenimonas sp. (1) | | | | | | | | | +--Lysobacter pythonis (1) | | | | | | | +--Thiotrichales (3) | | | | | | | | | +--Thiotrichaceae (2) | | | | | | | | | | | +--Leucothrix pacifica (1) | | | | | | | | | | | +--Candidatus Venteria ishoeyi (1) | | | | | | | | | +--Fastidiosibacteraceae (1) | | | | | | | | | +--Cysteiniphilum litorale (1) | | | | | | | +--Chromatiales (22) | | | | | | | | | +--Ectothiorhodospiraceae (4) | | | | | | | | | | | +--Spiribacter halobius (1) | | | | | | | | | | | +--Acidihalobacter aeolianus (1) | | | | | | | | | | | +--Ectothiorhodospira marina (2) | | | | | | | | | +--Granulosicoccaceae (10) | | | | | | | | | | | +--Granulosicoccus (10) | | | | | | | | | | | +--Granulosicoccus antarcticus IMCC3135 (10) | | | | | | | | | +--Wenzhouxiangellaceae (8) | | | | | | | | | +--Wenzhouxiangella (8) | | | | | | | | | +--Wenzhouxiangella sp. AB-CW3 (8) | | | | | | | +--Oceanospirillales (10) | | | | | | | | | +--Oceanospirillalesincertaesedis (3) | | | | | | | | | | | +--Pelagibaculum spongiae (3) | | | | | | | | | +--Halomonadaceae (4) | | | | | | | | | | | +--Halomonas zhuhanensis (1) | | | | | | | | | | | +--Halomonas azerica (1) | | | | | | | | | | | +--Halomonas nanhaiensis (1) | | | | | | | | | | | +--Pistricoccus aurantiacus (1) | | | | | | | | | +--Oceanospirillaceae (3) | | | | | | | | | +--Nitrincola tibetensis (2) | | | | | | | | | +--Marinobacterium (1) | | | | | | | | | +--Marinobacterium iners DSM 11526 (1) | | | | | | | +--Pseudomonadales (10) | | | | | | | +--Marinobacteraceae (7) | | | | | | | | | +--Marinobacter (6) | | | | | | | | | | | +--Marinobacter sp. B9-2 (1) | | | | | | | | | | | +--Marinobacter sp. R17 (5) | | | | | | | | | +--Marinobacter vulgaris (1) | | | | | | | +--Pseudomonadaceae (3) | | | | | | | +--Pseudomonas (2) | | | | | | | | | +--Pseudomonas sp. SSM44 (2) | | | | | | | +--Azotobactergroup (1) | | | | | | | +--Azotobacter (1) | | | | | | | +--Azotobacter chroococcum NCIMB 8003 (1) | | | | | +--Betaproteobacteria (144) | | | | | | | +--Burkholderiales (109) | | | | | | | | | +--Alcaligenaceae (9) | | | | | | | | | | | +--Pusillimonas (4) | | | | | | | | | | | | | +--Pusillimonas sp. ANT_WB101 (1) | | | | | | | | | | | | | +--Pusillimonas sp. DMV24BSW_D (2) | | | | | | | | | | | | | +--Pusillimonas sp. T2 (1) | | | | | | | | | | | +--Orrella marina (5) | | | | | | | | | +--Burkholderiales bacterium PBB3 (2) | | | | | | | | | +--Burkholderiaceae (24) | | | | | | | | | | | +--Trinickia terrae (6) | | | | | | | | | | | +--Trinickia dinghuensis (1) | | | | | | | | | | | +--Paraburkholderia (9) | | | | | | | | | | | | | +--Paraburkholderia sp. BL23I1N1 (8) | | | | | | | | | | | | | +--Paraburkholderia sp. BL10I2N1 (1) | | | | | | | | | | | +--Paraburkholderia panacisoli (3) | | | | | | | | | | | +--Quisquiliibacterium transsilvanicum (1) | | | | | | | | | | | +--Paraburkholderia saeva (2) | | | | | | | | | | | +--Paraburkholderia steynii (2) | | | | | | | | | +--Burkholderiales bacterium PBB5 (1) | | | | | | | | | +--Sphaerotilaceae (6) | | | | | | | | | | | +--Ideonella livida (1) | | | | | | | | | | | +--Roseateles (5) | | | | | | | | | | | +--Pelomonas sp. HMWF004 (5) | | | | | | | | | +--Comamonadaceae (30) | | | | | | | | | | | +--Hydrogenophaga (1) | | | | | | | | | | | | | +--Hydrogenophaga sp. BPS33 (1) | | | | | | | | | | | +--Comamonas flocculans (1) | | | | | | | | | | | +--Polaromonas (8) | | | | | | | | | | | | | +--Polaromonas sp. OV174 (8) | | | | | | | | | | | +--Ramlibacter aurantiacus (1) | | | | | | | | | | | +--Diaphorobacter ruginosibacter (1) | | | | | | | | | | | +--Ramlibacter (1) | | | | | | | | | | | | | +--Ramlibacter sp. WS9 (1) | | | | | | | | | | | +--Comamonadaceae bacterium G21597-S1 (1) | | | | | | | | | | | +--Caenimonas sedimenti (1) | | | | | | | | | | | +--Curvibacter (12) | | | | | | | | | | | | | +--Curvibacter sp. AEP1-3 (12) | | | | | | | | | | | +--Rhodoferax sediminis (3) | | | | | | | | | +--Oxalobacteraceae (37) | | | | | | | | | +--Telluriagroup (30) | | | | | | | | | | | +--Massilia violaceinigra (3) | | | | | | | | | | | +--Massilia eurypsychrophila (12) | | | | | | | | | | | +--Pseudoduganella ginsengisoli (1) | | | | | | | | | | | +--Massilia cavernae (11) | | | | | | | | | | | +--Massilia forsythiae (1) | | | | | | | | | | | +--Massilia psychrophila (2) | | | | | | | | | +--Noviherbaspirillum saxi (4) | | | | | | | | | +--Noviherbaspirillum sedimenti (2) | | | | | | | | | +--Glaciimonas (1) | | | | | | | | | +--Glaciimonas sp. (1) | | | | | | | +--Rhodocyclales (12) | | | | | | | | | +--Zoogloeaceae (12) | | | | | | | | | +--Thauera (1) | | | | | | | | | | | +--Thauera sp. K11 (1) | | | | | | | | | +--Pseudothauera lacus (2) | | | | | | | | | +--Pseudazoarcus pumilus (6) | | | | | | | | | +--Denitromonas iodatirespirans (3) | | | | | | | +--Neisseriales (12) | | | | | | | | | +--Chitinibacteraceae (12) | | | | | | | | | +--Chitinimonas (11) | | | | | | | | | | | +--Chitinimonas sp. BJB300 (11) | | | | | | | | | +--Chitinimonas arctica (1) | | | | | | | +--Betaproteobacteria bacterium (1) | | | | | | | +--Nitrosomonadales (10) | | | | | | | +--Gallionellaceae (2) | | | | | | | | | +--Nitrotoga (2) | | | | | | | | | +--Candidatus Nitrotoga sp. AM1P (2) | | | | | | | +--Sterolibacteriaceae (6) | | | | | | | | | +--Sulfuritalea (6) | | | | | | | | | +--Sulfuritalea sp. (6) | | | | | | | +--Sulfuricellaceae (2) | | | | | | | +--Sulfuricella (2) | | | | | | | +--Sulfuricella sp. (2) | | | | | +--Pseudomonadota bacterium (2) | | | | | +--Hydrogenophilia (2) | | | | | +--Hydrogenophilaliaincertaesedis (2) | | | | | +--Pelomicrobium methylotrophicum (2) | | | +--Tenericutes (11) | | | | | +--Mollicutes (11) | | | | | +--Anaeroplasmatales (10) | | | | | | | +--Anaeroplasmataceae (10) | | | | | | | +--Anaeroplasma bactoclasticum (10) | | | | | +--Acholeplasmatales (1) | | | | | +--Acholeplasmataceae (1) | | | | | +--Acholeplasma brassicae (1) | | | +--Thermotogae (19) | | | | | +--Thermotogales bacterium MesG1.Ag.4.2 (6) | | | | | +--Thermotogales (13) | | | | | +--Thermotogaceae (13) | | | | | +--Thermotogaceae bacterium SulfLac1 (2) | | | | | +--Kosmotoga olearia TBF 19.5.1 (11) | | | +--Acidobacteriota (4) | | | | | +--Terriglobia (4) | | | | | +--Bryobacterales (1) | | | | | | | +--Bryobacteraceae (1) | | | | | | | +--Paludibaculum fermentans (1) | | | | | +--CandidatusAcidoferrales (2) | | | | | | | +--Candidatus Acidoferrum panamensis (2) | | | | | +--Terriglobales (1) | | | | | +--Acidobacteriaceae (1) | | | | | +--Acidisarcina polymorpha (1) | | | +--Acidobacteria (5) | | | | | +--Acidobacteriales (1) | | | | | | | +--Acidobacteriaceae (1) | | | | | | | +--Acidobacterium capsulatum ATCC 51196 (1) | | | | | +--Holophagae (4) | | | | | +--Acanthopleuribacterales (4) | | | | | +--Acanthopleuribacteraceae (4) | | | | | +--Acanthopleuribacter pedis (4) | | | +--Bacteroidetes bacterium DQHS-4 (2) | | | +--Atribacterota (3) | | | | | +--Candidatus Atribacteria bacterium MT.SAG.1 (1) | | | | | +--Atribacteria (2) | | | | | +--Atribacterales (2) | | | | | +--Atribacteraceae (2) | | | | | +--Atribacter laminatus (2) | | | +--PVCgroup (138) | | | | | +--Kiritimatiellota (14) | | | | | | | +--Kiritimatiellia (13) | | | | | | | | | +--Kiritimatiellales (13) | | | | | | | | | +--Pontiellaceae (13) | | | | | | | | | +--Pontiella desulfatans (4) | | | | | | | | | +--Pontiella sulfatireligans (9) | | | | | | | +--Tichowtungiia (1) | | | | | | | +--Tichowtungiales (1) | | | | | | | +--Tichowtungiaceae (1) | | | | | | | +--Tichowtungia aerotolerans (1) | | | | | +--Verrucomicrobiota (13) | | | | | | | +--Verrucomicrobiotaincertaesedis (1) | | | | | | | | | +--Lentimonas (1) | | | | | | | | | +--Lentimonas sp. CC11 (1) | | | | | | | +--Opitutae (6) | | | | | | | | | +--Puniceicoccales (6) | | | | | | | | | +--Pelagicoccaceae (6) | | | | | | | | | +--Pelagicoccus enzymogenes (6) | | | | | | | +--Verrucomicrobiae (5) | | | | | | | | | +--Verrucomicrobiales (5) | | | | | | | | | +--Verrucomicrobiaceae (3) | | | | | | | | | | | +--Oceaniferula marina (2) | | | | | | | | | | | +--Phragmitibacter flavus (1) | | | | | | | | | +--Akkermansiaceae (1) | | | | | | | | | | | +--Akkermansiaceae bacterium (1) | | | | | | | | | +--Verrucomicrobiales bacterium VVV1 (1) | | | | | | | +--Methylacidiphilae (1) | | | | | | | +--Methylacidiphilales (1) | | | | | | | +--Methylacidiphilaceae (1) | | | | | | | +--Candidatus Methylacidithermus pantelleriae (1) | | | | | +--Kiritimatiellaeota (1) | | | | | | | +--Kiritimatiellae (1) | | | | | | | +--Kiritimatiellales (1) | | | | | | | +--Kiritimatiellaceae (1) | | | | | | | +--Kiritimatiella glycovorans (1) | | | | | +--Planctomycetota (76) | | | | | | | +--Planctomycetes bacterium Pla133 (2) | | | | | | | +--Phycisphaerae (1) | | | | | | | | | +--Sedimentisphaerales (1) | | | | | | | | | +--Sedimentisphaeraceae (1) | | | | | | | | | +--Sedimentisphaera salicampi (1) | | | | | | | +--Planctomycetes bacterium CA13 (7) | | | | | | | +--CandidatusUabimicrobiia (1) | | | | | | | | | +--CandidatusUabimicrobiales (1) | | | | | | | | | +--CandidatusUabimicrobiaceae (1) | | | | | | | | | +--Uabimicrobium amorphum (1) | | | | | | | +--Planctomycetia (64) | | | | | | | | | +--Gemmatales (1) | | | | | | | | | | | +--Gemmataceae (1) | | | | | | | | | | | +--Frigoriglobus tundricola (1) | | | | | | | | | +--Pirellulales (50) | | | | | | | | | | | +--Pirellulaceae (44) | | | | | | | | | | | | | +--Allorhodopirellula solitaria (2) | | | | | | | | | | | | | +--Rubripirellula reticaptiva (2) | | | | | | | | | | | | | +--Lignipirellula cremea (7) | | | | | | | | | | | | | +--Neorhodopirellula pilleata (10) | | | | | | | | | | | | | +--Stieleria varia (9) | | | | | | | | | | | | | +--Rubripirellula tenax (2) | | | | | | | | | | | | | +--Roseimaritima multifibrata (7) | | | | | | | | | | | | | +--Novipirellula galeiformis (1) | | | | | | | | | | | | | +--Anatilimnocola aggregata (2) | | | | | | | | | | | | | +--Novipirellula artificiosorum (2) | | | | | | | | | | | +--Lacipirellulaceae (6) | | | | | | | | | | | +--Bythopirellula polymerisocia (1) | | | | | | | | | | | +--Aeoliella mucimassa (1) | | | | | | | | | | | +--Adhaeretor mobilis (2) | | | | | | | | | | | +--Posidoniimonas polymericola (2) | | | | | | | | | +--Planctomycetales (13) | | | | | | | | | +--Planctomycetales bacterium 10988 (1) | | | | | | | | | +--Planctomycetaceae (12) | | | | | | | | | +--Maioricimonas rarisocia (10) | | | | | | | | | +--Planctomycetaceae bacterium (1) | | | | | | | | | +--Planctomyces bekefii (1) | | | | | | | +--CandidatusBrocadiia (1) | | | | | | | +--CandidatusBrocadiales (1) | | | | | | | +--CandidatusScalinduaceae (1) | | | | | | | +--Candidatus Scalindua japonica (1) | | | | | +--Planctomycetes (27) | | | | | | | +--Phycisphaerae (1) | | | | | | | | | +--Phycisphaerae bacterium ST-NAGAB-D1 (1) | | | | | | | +--Planctomycetia (26) | | | | | | | +--CandidatusBrocadiales (1) | | | | | | | | | +--CandidatusBrocadiaceae (1) | | | | | | | | | +--CandidatusBrocadia (1) | | | | | | | | | +--Candidatus Brocadia sinica JPN1 (1) | | | | | | | +--Planctomycetales (25) | | | | | | | +--Gemmataceae (1) | | | | | | | | | +--Fimbriiglobus ruber (1) | | | | | | | +--Isosphaeraceae (3) | | | | | | | | | +--Singulisphaera (3) | | | | | | | | | +--Singulisphaera acidiphila DSM 18658 (3) | | | | | | | +--Planctomycetaceae (21) | | | | | | | +--Rhodopirellula (3) | | | | | | | | | +--Rhodopirellula maiorica SM1 (3) | | | | | | | +--Fuerstia marisgermanicae (5) | | | | | | | +--Pirellula sp. SH-Sr6A (13) | | | | | +--Verrucomicrobia (3) | | | | | | | +--Opitutae (3) | | | | | | | +--Opitutales (3) | | | | | | | +--Opitutaceae (3) | | | | | | | +--Opitutaceae bacterium TSB47 (3) | | | | | +--Chlamydiota (4) | | | | | +--Chlamydiia (4) | | | | | +--Parachlamydiales (1) | | | | | | | +--Simkaniaceae (1) | | | | | | | +--Simkania (1) | | | | | | | +--Simkania sp. (1) | | | | | +--Chlamydiales (3) | | | | | +--Chlamydiales bacterium SCGC AG-110-P3 (3) | | | +--Nitrospirae (1) | | | | | +--Nitrospira (1) | | | | | +--Nitrospirales (1) | | | | | +--Nitrospiraceae (1) | | | | | +--Leptospirillum (1) | | | | | +--Leptospirillum sp. Group IV 'UBA BS' (1) | | | +--Actinobacteria (38) | | | | | +--Coriobacteridae (2) | | | | | | | +--Coriobacteriales (2) | | | | | | | +--Coriobacterineae (2) | | | | | | | +--Coriobacteriaceae (1) | | | | | | | | | +--Paraeggerthella hongkongensis (1) | | | | | | | +--Coriobacteriaceae bacterium BV3Ac1 (1) | | | | | +--Actinobacteridae (36) | | | | | +--Actinomycetales (36) | | | | | +--Corynebacterineae (2) | | | | | | | +--Mycobacteriaceae (2) | | | | | | | +--Mycobacterium intermedium (1) | | | | | | | +--Mycobacterium heidelbergense (1) | | | | | +--Streptomycineae (4) | | | | | | | +--Streptomycetaceae (4) | | | | | | | +--Streptomyces daliensis (1) | | | | | | | +--Streptomyces brasiliensis (3) | | | | | +--Streptosporangineae (22) | | | | | | | +--Nocardiopsaceae (14) | | | | | | | | | +--Haloactinospora alba (1) | | | | | | | | | +--Nocardiopsis kunsanensis (1) | | | | | | | | | +--Nocardiopsis metallicus (12) | | | | | | | +--Streptosporangiaceae (8) | | | | | | | +--Acrocarpospora pleiomorpha (1) | | | | | | | +--Nonomuraea polychroma (5) | | | | | | | +--Acrocarpospora corrugata (1) | | | | | | | +--Sphaerisporangium album (1) | | | | | +--Micrococcineae (4) | | | | | | | +--Micrococcaceae (3) | | | | | | | | | +--Arthrobacter psychrolactophilus (1) | | | | | | | | | +--Arthrobacter pigmenti (2) | | | | | | | +--Microbacteriaceae (1) | | | | | | | +--Leucobacter sp. K-540B (1) | | | | | +--Pseudonocardineae (3) | | | | | | | +--Pseudonocardiaceae (3) | | | | | | | +--Saccharopolyspora sp. SR8.15 (3) | | | | | +--Frankineae (1) | | | | | +--Frankiaceae (1) | | | | | +--Frankia sp. CcI3 (1) | | | +--Bdellovibrionota (2) | | | | | +--Oligoflexia (2) | | | | | +--Oligoflexales (2) | | | | | +--Oligoflexaceae (2) | | | | | +--Oligoflexus (2) | | | | | +--Oligoflexus sp. (2) | | | +--Planctomycetes (6) | | | | | +--Planctomycetacia (6) | | | | | +--Planctomycetales (6) | | | | | +--Planctomycetaceae (6) | | | | | +--Planctomyces sp. UC8 (1) | | | | | +--Rhodopirellula baltica SH 1 (1) | | | | | +--Rhodopirellula sp. LF2 (1) | | | | | +--Gemmata obscuriglobus (3) | | | +--Firmicutes (955) | | | | | +--Clostridia (477) | | | | | | | +--Thermoanaerobacterales (36) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (7) | | | | | | | | | | | +--Thermovenabulum sp. R270 (4) | | | | | | | | | | | +--Thermoanaerobacterium thermosaccharolyticum DSM 571 (2) | | | | | | | | | | | +--Thermosediminibacter oceani DSM 16646 (1) | | | | | | | | | +--Thermoanaerobacteraceae (29) | | | | | | | | | +--Thermoanaerobacter tengcongensis MB4 (1) | | | | | | | | | +--Moorellagroup (8) | | | | | | | | | | | +--Ammonifex degensii KC4 (3) | | | | | | | | | | | +--Moorella thermoacetica (1) | | | | | | | | | | | +--Moorella sp. 64_FGQ (4) | | | | | | | | | +--Fervidicola ferrireducens (4) | | | | | | | | | +--Thermoanaerobacter pseudethanolicus ATCC 33223 (16) | | | | | | | +--Clostridiales bacterium APP2 (3) | | | | | | | +--Halanaerobiales (6) | | | | | | | | | +--Halobacteroidaceae (1) | | | | | | | | | | | +--Acetohalobium arabaticum DSM 5501 (1) | | | | | | | | | +--Halanaerobiaceae (5) | | | | | | | | | +--Halanaerobium hydrogeniformans (4) | | | | | | | | | +--Halarsenatibacter silvermanii (1) | | | | | | | +--Natranaerobiales (61) | | | | | | | | | +--Natranaerobiaceae (61) | | | | | | | | | +--Natranaerobius trueperi (35) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (26) | | | | | | | +--Clostridiales (371) | | | | | | | +--Heliobacteriaceae (21) | | | | | | | | | +--Heliobacterium modesticaldum Ice1 (19) | | | | | | | | | +--Heliophilum fasciatum (1) | | | | | | | | | +--Heliobacillus mobilis (1) | | | | | | | +--ClostridialesFamilyXII.IncertaeSedis (1) | | | | | | | | | +--Fusibacter sp. 3-D3-R-P8ASC2010 (1) | | | | | | | +--Eubacteriaceae bacterium WN037 (2) | | | | | | | +--Clostridiaceae bacterium SN021 (4) | | | | | | | +--Peptostreptococcaceae (2) | | | | | | | | | +--Peptostreptococcus stomatis DSM 17678 (2) | | | | | | | +--Eubacteriaceae (17) | | | | | | | | | +--Acetobacterium paludosum (4) | | | | | | | | | +--Eubacterium oxidoreducens (7) | | | | | | | | | +--Acetobacterium bakii (1) | | | | | | | | | +--Eubacterium uniforme (2) | | | | | | | | | +--Alkalibaculum bacchi (2) | | | | | | | | | +--Eubacterium sp. AS15b (1) | | | | | | | +--Lachnospiraceae (27) | | | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (6) | | | | | | | | | +--Roseburia hominis A2-183 (2) | | | | | | | | | +--Coprococcus catus (1) | | | | | | | | | +--Catonella morbi ATCC 51271 (5) | | | | | | | | | +--Roseburia inulinivorans (5) | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | | | +--Coprococcus eutactus (1) | | | | | | | | | +--Butyrivibrio fibrisolvens (2) | | | | | | | | | +--Oribacterium sp. ACB1 (3) | | | | | | | | | +--Lachnospira multipara (1) | | | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (26) | | | | | | | | | +--Caldinitratiruptor microaerophilus (1) | | | | | | | | | +--Symbiobacterium thermophilum IAM 14863 (25) | | | | | | | +--Ruminococcaceae (7) | | | | | | | | | +--Ruminococcus obeum (1) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (3) | | | | | | | | | +--Acetivibrio ethanolgignens (3) | | | | | | | +--Blautia luti (2) | | | | | | | +--Anaerovirgula multivorans (2) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (8) | | | | | | | | | +--Peptoniphilus ivorii (1) | | | | | | | | | +--Peptoniphilus indolicus ATCC 29427 (1) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (2) | | | | | | | | | +--Peptoniphilus duerdenii ATCC BAA-1640 (2) | | | | | | | | | +--Sporanaerobacter sp. C5BEL (2) | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | +--Proteiniborus ethanoligenes (4) | | | | | | | +--Lachnospiraceae bacterium A2 (1) | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | +--Mogibacterium sp. CM50 (1) | | | | | | | +--Clostridiaceae (184) | | | | | | | | | +--Thermotalea metallivorans (21) | | | | | | | | | +--Clostridium saccharolyticum WM1 (2) | | | | | | | | | +--Clostridium ljungdahlii (2) | | | | | | | | | +--Clostridium pasteurianum BC1 (3) | | | | | | | | | +--Clostridium tetani E88 (1) | | | | | | | | | +--Clostridium thermoalcaliphilum (1) | | | | | | | | | +--Clostridium sp. 232.1 (3) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (3) | | | | | | | | | +--Clostridium sp. D5 (11) | | | | | | | | | +--Clostridium sp. 7_2_43FAA (1) | | | | | | | | | +--Clostridium leptum (1) | | | | | | | | | +--Clostridium uliginosum (1) | | | | | | | | | +--Clostridium thermosuccinogenes (1) | | | | | | | | | +--Clostridium phytofermentans ISDg (1) | | | | | | | | | +--Clostridium aciditolerans (1) | | | | | | | | | +--Clostridium hathewayi (1) | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (7) | | | | | | | | | +--Clostridium cellulovorans 743B (1) | | | | | | | | | +--Clostridium lavalense (14) | | | | | | | | | +--Natronincola ferrireducens (1) | | | | | | | | | +--Clostridium tetanomorphum (4) | | | | | | | | | +--Clostridium sulfidigenes (2) | | | | | | | | | +--Clostridium vincentii (9) | | | | | | | | | +--Clostridium estertheticum subsp. estertheticum (3) | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (1) | | | | | | | | | +--Clostridium hungatei (1) | | | | | | | | | +--Clostridium neonatale (1) | | | | | | | | | +--Clostridium aminophilum (23) | | | | | | | | | +--Clostridium sp. DL-VIII (2) | | | | | | | | | +--Clostridium puniceum (4) | | | | | | | | | +--Clostridium paraputrificum (1) | | | | | | | | | +--Clostridium polysaccharolyticum (3) | | | | | | | | | +--Alkaliphilus oremlandii OhILAs (2) | | | | | | | | | +--Clostridium halophilum (6) | | | | | | | | | +--Clostridium sp. SY8519 (3) | | | | | | | | | +--Thermohalobacter berrensis (3) | | | | | | | | | +--Clostridium fimetarium (2) | | | | | | | | | +--Clostridium tagluense (10) | | | | | | | | | +--Clostridium caenicola (1) | | | | | | | | | +--Clostridium populeti (1) | | | | | | | | | +--Clostridium putrefaciens (4) | | | | | | | | | +--Anaerobacter polyendosporus (3) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (13) | | | | | | | | | +--Clostridium neopropionicum (1) | | | | | | | | | +--Clostridium botulinum A str. ATCC 3502 (2) | | | | | | | | | +--Caloramator mitchellensis (2) | | | | | | | +--Lachnospiraceae bacterium 3-1 (4) | | | | | | | +--Lachnospiraceae bacterium 1_4_56FAA (1) | | | | | | | +--Syntrophomonadaceae (5) | | | | | | | | | +--Syntrophothermus lipocalidus DSM 12680 (1) | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | | | +--Syntrophomonas wolfei subsp. wolfei str. Goettingen (3) | | | | | | | +--Peptococcaceae (43) | | | | | | | | | +--Thermincola potens JR (5) | | | | | | | | | +--Syntrophobotulus glycolicus DSM 8271 (1) | | | | | | | | | +--Desulfotomaculum carboxydivorans CO-1-SRB (6) | | | | | | | | | +--Sporotomaculum syntrophicum (3) | | | | | | | | | +--Pelotomaculum thermopropionicum SI (2) | | | | | | | | | +--Desulfosporosinus orientis DSM 765 (5) | | | | | | | | | +--Candidatus Desulforudis audaxviator MP104C (1) | | | | | | | | | +--Desulfitobacterium hafniense Y51 (3) | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (3) | | | | | | | | | +--Pelotomaculum propionicicum (3) | | | | | | | | | +--Desulfosporosinus youngiae DSM 17734 (2) | | | | | | | | | +--Desulfotomaculum thermobenzoicum (2) | | | | | | | | | +--Pelotomaculum schinkii (3) | | | | | | | | | +--Desulfitobacterium metallireducens DSM 15288 (4) | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (2) | | | | | | | | | +--Sulfobacillus acidophilus DSM 10332 (2) | | | | | | | +--Lachnospiraceae bacterium A4 (1) | | | | | | | +--Lachnospiraceae bacterium 28-4 (4) | | | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (1) | | | | | +--Lactobacillales (61) | | | | | | | +--Streptococcaceae (17) | | | | | | | | | +--Streptococcus henryi (2) | | | | | | | | | +--Streptococcus merionis (1) | | | | | | | | | +--Streptococcus pneumoniae D39 (3) | | | | | | | | | +--Streptococcus sp. ERD01G (2) | | | | | | | | | +--Streptococcus agalactiae 2603V/R (1) | | | | | | | | | +--Streptococcus pneumoniae R6 (3) | | | | | | | | | +--Streptococcus pneumoniae TIGR4 (4) | | | | | | | | | +--Streptococcus pasteurianus ATCC 43144 (1) | | | | | | | +--Carnobacteriaceae (17) | | | | | | | | | +--Granulicatella balaenopterae (3) | | | | | | | | | +--Carnobacterium sp. LMG 26642 (9) | | | | | | | | | +--Alkalibacterium pelagium (3) | | | | | | | | | +--Alkalibacterium kapii (1) | | | | | | | | | +--Desemzia incerta (1) | | | | | | | +--Enterococcaceae (5) | | | | | | | | | +--Pilibacter termitis (1) | | | | | | | | | +--Vagococcus elongatus (2) | | | | | | | | | +--Enterococcus aquimarinus (1) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | +--Lactobacillaceae (22) | | | | | | | +--Lactobacillus pobuzihii (3) | | | | | | | +--Lactobacillus plantarum WCFS1 (1) | | | | | | | +--Sharpea azabuensis (1) | | | | | | | +--Lactobacillus crispatus ST1 (1) | | | | | | | +--Lactobacillus salivarius UCC118 (1) | | | | | | | +--Lactobacillus reuteri DSM 20016 (11) | | | | | | | +--Lactobacillus ingluviei (2) | | | | | | | +--Lactobacillus brevis ATCC 367 (1) | | | | | | | +--Lactobacillus casei ATCC 334 (1) | | | | | +--Negativicutes (23) | | | | | | | +--Selenomonadales (23) | | | | | | | +--Acidaminococcaceae (3) | | | | | | | | | +--Acidaminococcus intestini RyC-MR95 (3) | | | | | | | +--Veillonellaceae (20) | | | | | | | +--Anaerovibrio lipolyticus (1) | | | | | | | +--Sporomusa malonica (3) | | | | | | | +--Thermosinus carboxydivorans Nor1 (5) | | | | | | | +--Megasphaera elsdenii DSM 20460 (5) | | | | | | | +--Sporomusa termitida (1) | | | | | | | +--Pelosinus sp. UFO1 (1) | | | | | | | +--Selenomonas sputigena ATCC 35185 (1) | | | | | | | +--Propionispira arboris (2) | | | | | | | +--Pectinatus sp. TY (1) | | | | | +--Bacillales (343) | | | | | | | +--Thermoactinomycetaceae bacterium JFMB-ATE (2) | | | | | | | +--Alicyclobacillaceae (26) | | | | | | | | | +--Alicyclobacillus macrosporangiidus (3) | | | | | | | | | +--Alicyclobacillus ferrooxydans (14) | | | | | | | | | +--Alicyclobacillus hesperidum (7) | | | | | | | | | +--Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 (1) | | | | | | | | | +--Alicyclobacillus sp. 'Sueoka' (1) | | | | | | | +--Planococcaceae (12) | | | | | | | | | +--'Jeotgalibacillus soli' Cunha et al. 2011 (1) | | | | | | | | | +--Jeotgalibacillus alimentarius (1) | | | | | | | | | +--Filibacter limicola (7) | | | | | | | | | +--Ureibacillus terrenus (2) | | | | | | | | | +--Sporosarcina luteola (1) | | | | | | | +--Bacillaceae (210) | | | | | | | | | +--Oceanobacillus iheyensis HTE831 (6) | | | | | | | | | +--Bacillus taeanensis (1) | | | | | | | | | +--Oceanobacillus profundus (1) | | | | | | | | | +--Bacillus asahii (1) | | | | | | | | | +--Virgibacillus pantothenticus (8) | | | | | | | | | +--Piscibacillus sp. HS224 (8) | | | | | | | | | +--Bacillus [pallidus] (1) | | | | | | | | | +--Tenuibacillus multivorans (1) | | | | | | | | | +--Gracilibacillus dipsosauri (2) | | | | | | | | | +--Bacillus galactosidilyticus (12) | | | | | | | | | +--Bacillus pseudofirmus OF4 (2) | | | | | | | | | +--Bacillus thermoamylovorans (2) | | | | | | | | | +--Bacillus methanolicus MGA3 (15) | | | | | | | | | +--Bacillus litoralis (6) | | | | | | | | | +--Bacillus muralis (1) | | | | | | | | | +--Aeribacillus pallidus (8) | | | | | | | | | +--Calditerricola satsumensis (2) | | | | | | | | | +--Bacillus subterraneus (1) | | | | | | | | | +--Ornithinibacillus sp. H9B(2010) (1) | | | | | | | | | +--Bacillus neizhouensis (6) | | | | | | | | | +--Caldalkalibacillus thermarum TA2.A1 (1) | | | | | | | | | +--Bacillus ginsengihumi (2) | | | | | | | | | +--Natronobacillus azotifigens (1) | | | | | | | | | +--Bacillus sp. X5B(2010) (2) | | | | | | | | | +--Alkalibacillus haloalkaliphilus (1) | | | | | | | | | +--Cerasibacillus quisquiliarum (1) | | | | | | | | | +--Bacillus halodurans C-125 (6) | | | | | | | | | +--Bacillus sp. NH3 (1) | | | | | | | | | +--Bacillus salarius (3) | | | | | | | | | +--Bacillus sp. P4B(2010) (3) | | | | | | | | | +--Ornithinibacillus sp. J8B(2010) (1) | | | | | | | | | +--Virgibacillus necropolis (2) | | | | | | | | | +--Virgibacillus salinus (1) | | | | | | | | | +--Oceanobacillus sp. A21 (2) | | | | | | | | | +--Bacillus shackletonii (23) | | | | | | | | | +--Geobacillus kaustophilus HTA426 (2) | | | | | | | | | +--Bacillus sp. B48(2010) (1) | | | | | | | | | +--Bacillus krulwichiae (3) | | | | | | | | | +--Bacillus nealsonii (1) | | | | | | | | | +--Virgibacillus koreensis (1) | | | | | | | | | +--Lentibacillus halodurans (2) | | | | | | | | | +--Bacillus arseniciselenatis (5) | | | | | | | | | +--Bacillus cohnii (4) | | | | | | | | | +--Bacillus vietnamensis (6) | | | | | | | | | +--Bacillus lentus (1) | | | | | | | | | +--Paraliobacillus quinghaiensis (2) | | | | | | | | | +--Salsuginibacillus halophilus (1) | | | | | | | | | +--Oceanobacillus oncorhynchi (7) | | | | | | | | | +--Lysinibacillus sphaericus (1) | | | | | | | | | +--Bacillus sp. Y1 (1) | | | | | | | | | +--Bacillus qingdaonensis (1) | | | | | | | | | +--Bacillus arsenicus (1) | | | | | | | | | +--Lentibacillus salicampi (1) | | | | | | | | | +--Bacillus benzoevorans (1) | | | | | | | | | +--Bacillus schlegelii (1) | | | | | | | | | +--Lentibacillus kapialis (2) | | | | | | | | | +--Bacillus cellulosilyticus DSM 2522 (6) | | | | | | | | | +--Gracilibacillus ureilyticus (1) | | | | | | | | | +--Bacillus circulans (3) | | | | | | | | | +--Sediminibacillus albus (1) | | | | | | | | | +--Ornithinibacillus sp. G8B(2010) (1) | | | | | | | | | +--Virgibacillus salarius (3) | | | | | | | | | +--Anoxybacillus flavithermus (1) | | | | | | | | | +--Anoxybacillus amylolyticus (8) | | | | | | | | | +--Halolactibacillus alkaliphilus (5) | | | | | | | | | +--Bacillus sp. OxB-1 (1) | | | | | | | +--Paenibacillaceae (90) | | | | | | | | | +--Paenibacillus cellulosilyticus (1) | | | | | | | | | +--Paenibacillus naphthalenovorans (5) | | | | | | | | | +--Brevibacillus sp. WF146 (15) | | | | | | | | | +--Paenibacillus sp. WPCB173 (1) | | | | | | | | | +--Paenibacillus stellifer (9) | | | | | | | | | +--Brevibacillus brevis NBRC 100599 (6) | | | | | | | | | +--Paenibacillus macerans (4) | | | | | | | | | +--Paenibacillus sp. 598K (2) | | | | | | | | | +--Paenibacillus wynnii (2) | | | | | | | | | +--Paenibacillus sp. oral taxon 786 str. D14 (2) | | | | | | | | | +--Paenibacillus sp. CIP 101062 (1) | | | | | | | | | +--Paenibacillus polymyxa SC2 (1) | | | | | | | | | +--Thermobacillus composti KWC4 (13) | | | | | | | | | +--Paenibacillus graminis (7) | | | | | | | | | +--Paenibacillus sp. MY03 (1) | | | | | | | | | +--Brevibacillus sp. CJ71 (2) | | | | | | | | | +--Paenibacillus pectinilyticus (1) | | | | | | | | | +--Paenibacillus prosopidis (1) | | | | | | | | | +--Cohnella luojiensis (2) | | | | | | | | | +--Cohnella sp. AR92 (1) | | | | | | | | | +--Paenibacillus donghaensis (6) | | | | | | | | | +--Paenibacillus durus (1) | | | | | | | | | +--Cohnella thailandensis (1) | | | | | | | | | +--Paenibacillus validus (1) | | | | | | | | | +--Aneurinibacillusgroup (1) | | | | | | | | | | | +--Aneurinibacillus migulanus (1) | | | | | | | | | +--Paenibacillus phyllosphaerae (1) | | | | | | | | | +--Paenibacillus contaminans (2) | | | | | | | +--Sporolactobacillaceae (3) | | | | | | | +--Sporolactobacillus inulinus (1) | | | | | | | +--Scopulibacillus darangshiensis (1) | | | | | | | +--Sporolactobacillus inulinus CASD (1) | | | | | +--Erysipelotrichi (51) | | | | | +--Erysipelotrichales (51) | | | | | +--Clostridium ramosum DSM 1402 (4) | | | | | +--Erysipelotrichaceae (6) | | | | | | | +--Holdemania filiformis (1) | | | | | | | +--Solobacterium moorei F0204 (5) | | | | | +--Clostridium spiroforme DSM 1552 (26) | | | | | +--Erysipelotrichaceae bacterium 5_2_54FAA (2) | | | | | +--Clostridium cocleatum (13) | | | +--bacterium 1XD42-8 (2) | | | +--Thermodesulfobacteriota (69) | | | | | +--Desulfobacteria (23) | | | | | | | +--Desulfobacterales (23) | | | | | | | +--Desulfosarcinaceae (16) | | | | | | | | | +--Desulfosarcina (15) | | | | | | | | | | | +--Desulfosarcina ovata subsp. ovata (15) | | | | | | | | | +--Desulfosarcina widdelii (1) | | | | | | | +--Desulfobacteraceae (7) | | | | | | | +--Desulfobacteraceae bacterium SEEP-SAG9 (4) | | | | | | | +--Desulfobacteraceae bacterium SEEP-SAG10 (1) | | | | | | | +--Desulfobacteraceae bacterium (2) | | | | | +--Desulfobulbia (42) | | | | | | | +--Desulfobulbales (42) | | | | | | | +--Desulfocapsaceae (3) | | | | | | | | | +--Desulforhopalus (3) | | | | | | | | | +--Desulforhopalus sp. IMCC35007 (3) | | | | | | | +--Desulfobulbaceae (39) | | | | | | | +--Desulfolithobacter dissulfuricans (35) | | | | | | | +--Candidatus Electrothrix marina (1) | | | | | | | +--Desulfomarina profundi (2) | | | | | | | +--Candidatus Electrothrix communis (1) | | | | | +--Desulfuromonadia (4) | | | | | +--Geobacterales (4) | | | | | +--Geobacteraceae (4) | | | | | +--Geobacteraceae bacterium (2) | | | | | +--Geobacter (1) | | | | | | | +--Geobacter sp. DSM 9736 (1) | | | | | +--Pelovirga terrestris (1) | | | +--Balneolaeota (1) | | | | | +--Balneolia (1) | | | | | +--Balneolales (1) | | | | | +--Balneolaceae (1) | | | | | +--Aliifodinibius roseus (1) | | | +--bacterium D16-59 (2) | | | +--Nitrospinae/Tectomicrobiagroup (4) | | | +--Nitrospinae (3) | | | | | +--Nitrospinia (3) | | | | | +--Nitrospinales (3) | | | | | +--Nitrospinaceae (3) | | | | | +--Nitrospina sp. SCGC_AAA799_A02 (2) | | | | | +--Nitrospina sp. SCGC_AAA799_C22 (1) | | | +--CandidatusTectomicrobia (1) | | | +--Candidatus Entotheonella sp. TSY1 (1) | +--methanotrophic endosymbiont of Bathymodiolus puteoserpentis (Logatchev) (1) | +--intestinal bacterium CG19-1 (2) | +--Archaea (2) | +--Euryarchaeota (2) | +--Thermoplasmata (2) | +--methanogenic archaeon ISO4-H5 (1) | +--Methanomassiliicoccales (1) | +--Methanomassiliicoccaceae (1) | +--CandidatusMethanomethylophilus (1) | +--Candidatus Methanomethylophilus alvus Mx1201 (1)