# Species tree for RF00554 # Generated from Rfam version 15.00 | +--Eukaryota (2109) | +--Metazoa (2028) | | | +--Chordata (2028) | | | +--Craniata (2028) | | | +--Vertebrata (2028) | | | +--Euteleostomi (2028) | | | +--Lepidosauria (3) | | | | | +--Squamata (3) | | | | | +--Iguania (3) | | | | | +--Acrodonta (3) | | | | | +--Agamidae (3) | | | | | +--Amphibolurinae (1) | | | | | | | +--Pogona vitticeps (central bearded dragon) (1) | | | | | +--Agaminae (2) | | | | | +--Phrynocephalus forsythii (2) | | | +--Actinopterygii (2) | | | | | +--Polypteriformes (2) | | | | | +--Polypteridae (2) | | | | | +--Erpetoichthys calabaricus (reedfish) (1) | | | | | +--Polypterus senegalus (1) | | | +--Mammalia (2014) | | | | | +--Monotremata (2) | | | | | | | +--Ornithorhynchidae (2) | | | | | | | +--Ornithorhynchus anatinus (platypus) (2) | | | | | +--Metatheria (8) | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | +--Didelphimorphia (1) | | | | | | | | | +--Didelphidae (1) | | | | | | | | | +--Monodelphis domestica (gray short-tailed opossum) (1) | | | | | | | +--Diprotodontia (6) | | | | | | | +--Vombatidae (3) | | | | | | | | | +--Vombatus ursinus (common wombat) (3) | | | | | | | +--Phascolarctidae (3) | | | | | | | +--Phascolarctos cinereus (koala) (3) | | | | | +--Eutheria (2004) | | | | | +--Afrotheria (7) | | | | | | | +--Sirenia (2) | | | | | | | | | +--Trichechidae (2) | | | | | | | | | +--Trichechus manatus latirostris (2) | | | | | | | +--Proboscidea (2) | | | | | | | | | +--Elephantidae (2) | | | | | | | | | +--Loxodonta africana (African savanna elephant) (2) | | | | | | | +--Chrysochloridae (3) | | | | | | | +--Chrysochlorinae (3) | | | | | | | +--Chrysochloris asiatica (3) | | | | | +--Euarchontoglires (1022) | | | | | | | +--Primates (382) | | | | | | | | | +--Haplorrhini (333) | | | | | | | | | | | +--Catarrhini (244) | | | | | | | | | | | | | +--Hominidae (78) | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (14) | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (14) | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (14) | | | | | | | | | | | | | | | +--Homo sapiens (human) (21) | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (15) | | | | | | | | | | | | | +--Hylobatidae (14) | | | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (14) | | | | | | | | | | | | | +--Cercopithecidae (152) | | | | | | | | | | | | | +--Cercopithecinae (99) | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (13) | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (13) | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (12) | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (12) | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (13) | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (13) | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (13) | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (10) | | | | | | | | | | | | | +--Colobinae (53) | | | | | | | | | | | | | +--Colobus angolensis palliatus (13) | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (13) | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (13) | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (14) | | | | | | | | | | | +--Platyrrhini (89) | | | | | | | | | | | +--Aotidae (21) | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (21) | | | | | | | | | | | +--Cebidae (68) | | | | | | | | | | | +--Saimiriinae (22) | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (22) | | | | | | | | | | | +--Callitrichinae (22) | | | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (22) | | | | | | | | | | | +--Cebinae (24) | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (24) | | | | | | | | | +--Strepsirrhini (49) | | | | | | | | | +--Lemuriformes (29) | | | | | | | | | | | +--Indriidae (13) | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (13) | | | | | | | | | | | +--Cheirogaleidae (16) | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (16) | | | | | | | | | +--Lorisiformes (20) | | | | | | | | | +--Galagidae (20) | | | | | | | | | +--Otolemur garnettii (small-eared galago) (20) | | | | | | | +--Scandentia (25) | | | | | | | | | +--Tupaiidae (25) | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (25) | | | | | | | +--Glires (615) | | | | | | | +--Rodentia (608) | | | | | | | | | +--Hystricognathi (48) | | | | | | | | | | | +--Chinchillidae (10) | | | | | | | | | | | | | +--Chinchilla lanigera (10) | | | | | | | | | | | +--Caviidae (14) | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (14) | | | | | | | | | | | +--Bathyergidae (13) | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (4) | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (9) | | | | | | | | | | | +--Octodontidae (11) | | | | | | | | | | | +--Octodon degus (degu) (11) | | | | | | | | | +--Sciurognathi (560) | | | | | | | | | +--Sciuridae (28) | | | | | | | | | | | +--Xerinae (17) | | | | | | | | | | | | | +--Marmotini (17) | | | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (3) | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (3) | | | | | | | | | | | | | +--Spermophilus parryii (Arctic ground squirrel) (3) | | | | | | | | | | | | | +--Marmota monax (woodchuck) (3) | | | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (5) | | | | | | | | | | | +--Sciurinae (11) | | | | | | | | | | | +--Sciurini (11) | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (4) | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (7) | | | | | | | | | +--Muroidea (476) | | | | | | | | | | | +--Spalacidae (22) | | | | | | | | | | | | | +--Spalacinae (22) | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (22) | | | | | | | | | | | +--Muridae (409) | | | | | | | | | | | | | +--Murinae (409) | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (121) | | | | | | | | | | | | | +--Mus (288) | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (145) | | | | | | | | | | | | | +--Mus musculus (house mouse) (143) | | | | | | | | | | | +--Cricetidae (45) | | | | | | | | | | | +--Arvicolinae (7) | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (7) | | | | | | | | | | | +--Cricetinae (24) | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (14) | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (10) | | | | | | | | | | | +--Neotominae (14) | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (5) | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (9) | | | | | | | | | +--Heteromyidae (10) | | | | | | | | | | | +--Dipodomyinae (10) | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (10) | | | | | | | | | +--Dipodidae (15) | | | | | | | | | | | +--Dipodinae (15) | | | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (15) | | | | | | | | | +--Castoridae (31) | | | | | | | | | +--Castor canadensis (American beaver) (31) | | | | | | | +--Lagomorpha (7) | | | | | | | +--Leporidae (7) | | | | | | | +--Oryctolagus cuniculus (rabbit) (7) | | | | | +--Laurasiatheria (975) | | | | | +--Carnivora (78) | | | | | | | +--Feliformia (34) | | | | | | | | | +--Herpestidae (8) | | | | | | | | | | | +--Suricata suricatta (meerkat) (8) | | | | | | | | | +--Hyaenidae (11) | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (11) | | | | | | | | | +--Felidae (15) | | | | | | | | | +--Pantherinae (4) | | | | | | | | | | | +--Panthera leo (lion) (2) | | | | | | | | | | | +--Panthera tigris altaica (Amur tiger) (2) | | | | | | | | | +--Felinae (8) | | | | | | | | | | | +--Puma concolor (puma) (2) | | | | | | | | | | | +--Felis catus (domestic cat) (2) | | | | | | | | | | | +--Lynx pardinus (Spanish lynx) (2) | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (2) | | | | | | | | | +--Acinonychinae (3) | | | | | | | | | +--Acinonyx jubatus (cheetah) (3) | | | | | | | +--Caniformia (44) | | | | | | | +--Phocidae (6) | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (3) | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (3) | | | | | | | +--Otariidae (3) | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (3) | | | | | | | +--Mustelidae (12) | | | | | | | | | +--Martinae (3) | | | | | | | | | | | +--Gulo gulo (wolverine) (3) | | | | | | | | | +--Lutrinae (3) | | | | | | | | | | | +--Enhydra lutris kenyoni (3) | | | | | | | | | +--Mustelinae (6) | | | | | | | | | +--Neovison vison (3) | | | | | | | | | +--Mustela putorius furo (domestic ferret) (3) | | | | | | | +--Canidae (12) | | | | | | | | | +--Canis lupus dingo (dingo) (3) | | | | | | | | | +--Vulpes vulpes (red fox) (3) | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (3) | | | | | | | | | +--Canis lupus familiaris (dog) (3) | | | | | | | +--Ursidae (8) | | | | | | | | | +--Ursus americanus (American black bear) (3) | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (2) | | | | | | | | | +--Ursus maritimus (polar bear) (3) | | | | | | | +--Odobenidae (3) | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (3) | | | | | +--Cetartiodactyla (194) | | | | | | | +--Tylopoda (20) | | | | | | | | | +--Camelidae (20) | | | | | | | | | +--Vicugna pacos (alpaca) (5) | | | | | | | | | +--Camelus dromedarius (Arabian camel) (5) | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (5) | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (5) | | | | | | | +--Cetacea (48) | | | | | | | | | +--Odontoceti (35) | | | | | | | | | | | +--Monodontidae (8) | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (4) | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (4) | | | | | | | | | | | +--Phocoenidae (6) | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (6) | | | | | | | | | | | +--Physeteridae (4) | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (4) | | | | | | | | | | | +--Lipotidae (6) | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (6) | | | | | | | | | | | +--Delphinidae (11) | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (5) | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (6) | | | | | | | | | +--Mysticeti (13) | | | | | | | | | +--Balaenopteridae (9) | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (4) | | | | | | | | | | | +--Balaenoptera physalus (Fin whale) (5) | | | | | | | | | +--Eschrichtiidae (4) | | | | | | | | | +--Eschrichtius robustus (grey whale) (4) | | | | | | | +--Ruminantia (122) | | | | | | | | | +--Pecora (122) | | | | | | | | | +--Bovidae (63) | | | | | | | | | | | +--Bovinae (46) | | | | | | | | | | | | | +--Bos grunniens (domestic yak) (9) | | | | | | | | | | | | | +--Bos indicus (9) | | | | | | | | | | | | | +--Bos (7) | | | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (7) | | | | | | | | | | | | | +--Bos taurus (cattle) (13) | | | | | | | | | | | | | +--Bos grunniens mutus (8) | | | | | | | | | | | +--Caprinae (17) | | | | | | | | | | | +--Capra hircus (goat) (8) | | | | | | | | | | | +--Ovis aries (sheep) (9) | | | | | | | | | +--Moschidae (7) | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (7) | | | | | | | | | +--Cervidae (52) | | | | | | | | | +--Odocoileinae (8) | | | | | | | | | | | +--Odocoileus virginianus texanus (8) | | | | | | | | | +--Muntiacinae (13) | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (13) | | | | | | | | | +--Cervinae (31) | | | | | | | | | +--Cervus elaphus yarkandensis (20) | | | | | | | | | +--Cervus elaphus hippelaphus (11) | | | | | | | +--Suina (4) | | | | | | | +--Tayassuidae (2) | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (2) | | | | | | | +--Suidae (2) | | | | | | | +--Sus scrofa (pig) (2) | | | | | +--Insectivora (28) | | | | | | | +--Talpidae (5) | | | | | | | | | +--Galemys pyrenaicus (5) | | | | | | | +--Erinaceidae (23) | | | | | | | +--Erinaceinae (23) | | | | | | | +--Erinaceus europaeus (western European hedgehog) (23) | | | | | +--Chiroptera (665) | | | | | | | +--Microchiroptera (650) | | | | | | | | | +--Rhinolophidae (10) | | | | | | | | | | | +--Hipposiderinae (6) | | | | | | | | | | | | | +--Hipposideros armiger (6) | | | | | | | | | | | +--Rhinolophinae (4) | | | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (4) | | | | | | | | | +--Phyllostomidae (37) | | | | | | | | | | | +--Phyllostominae (37) | | | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (37) | | | | | | | | | +--Vespertilionidae (566) | | | | | | | | | | | +--Myotis lucifugus (little brown bat) (109) | | | | | | | | | | | +--Eptesicus nilssoni (northern bat) (99) | | | | | | | | | | | +--Myotis davidii (102) | | | | | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (61) | | | | | | | | | | | +--Myotis myotis (97) | | | | | | | | | | | +--Myotis brandtii (98) | | | | | | | | | +--Molossidae (37) | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (37) | | | | | | | +--Megachiroptera (15) | | | | | | | +--Pteropodidae (15) | | | | | | | +--Pteropodinae (15) | | | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (3) | | | | | | | +--Pteropus vampyrus (large flying fox) (6) | | | | | | | +--Pteropus alecto (black flying fox) (6) | | | | | +--Perissodactyla (10) | | | | | +--Equidae (8) | | | | | | | +--Equus caballus (horse) (4) | | | | | | | +--Equus asinus (ass) (4) | | | | | +--Rhinocerotidae (2) | | | | | +--Diceros bicornis minor (2) | | | +--Testudines (8) | | | | | +--Cryptodira (6) | | | | | | | +--Trionychoidea (1) | | | | | | | | | +--Trionychidae (1) | | | | | | | | | +--Pelodiscus sinensis (Chinese softshell turtle) (1) | | | | | | | +--Testudinoidea (5) | | | | | | | +--Emydidae (2) | | | | | | | | | +--Chrysemys picta bellii (western painted turtle) (2) | | | | | | | +--Testudinidae (3) | | | | | | | +--Geochelone nigra abingdoni (1) | | | | | | | +--Gopherus agassizii (desert tortoise) (2) | | | | | +--Pleurodira (2) | | | | | +--Pelomedusidae (2) | | | | | +--Pelusios castaneus (2) | | | +--Archosauria (1) | | | +--Dinosauria (1) | | | +--Saurischia (1) | | | +--Theropoda (1) | | | +--Coelurosauria (1) | | | +--Aves (1) | | | +--Neognathae (1) | | | +--Passeriformes (1) | | | +--Corvoidea (1) | | | +--Irenidae (1) | | | +--Chloropsis hardwickii (1) | +--Opisthokonta (81) | +--Metazoa (81) | +--Eumetazoa (81) | +--Bilateria (81) | +--Deuterostomia (81) | +--Chordata (81) | +--Craniata (81) | +--Vertebrata (81) | +--Gnathostomata (81) | +--Teleostomi (81) | +--Euteleostomi (81) | +--Sarcopterygii (81) | +--Dipnotetrapodomorpha (81) | +--Tetrapoda (81) | +--Amniota (81) | +--Sauropsida (1) | | | +--Sauria (1) | | | +--Archelosauria (1) | | | +--Testudinata (1) | | | +--Testudines (1) | | | +--Cryptodira (1) | | | +--Durocryptodira (1) | | | +--Testudinoidea (1) | | | +--Testudinidae (1) | | | +--Gopherus evgoodei (goodes thornscrub tortoise) (1) | +--Mammalia (80) | +--Theria (80) | +--Eutheria (80) | +--Afrotheria (3) | | | +--Tubulidentata (3) | | | +--Orycteropodidae (3) | | | +--Orycteropus (3) | | | +--Orycteropus afer afer (3) | +--Boreoeutheria (77) | +--Euarchontoglires (62) | | | +--Primates (62) | | | +--Haplorrhini (46) | | | | | +--Simiiformes (24) | | | | | | | +--Platyrrhini (24) | | | | | | | +--Cebidae (24) | | | | | | | +--Cebinae (24) | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (24) | | | | | +--Tarsiiformes (22) | | | | | +--Tarsiidae (22) | | | | | +--Carlito syrichta (Philippine tarsier) (22) | | | +--Strepsirrhini (16) | | | +--Lemuriformes (16) | | | +--Lemuridae (16) | | | +--Prolemur simus (greater bamboo lemur) (16) | +--Laurasiatheria (15) | +--Artiodactyla (15) | +--Whippomorpha (5) | | | +--Cetacea (5) | | | +--Odontoceti (5) | | | +--Phocoenidae (5) | | | +--Neophocaena (5) | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (5) | +--Ruminantia (10) | +--Pecora (10) | +--Bovidae (10) | +--Bovinae (10) | +--Bison (10) | +--Bison bison bison (north american plains bison) (10)