# Species tree for RF00391 # Generated from Rfam version 15.00 | +--Eukaryota (30) | | | +--Metazoa (16) | | | | | +--Chordata (13) | | | | | | | +--Craniata (13) | | | | | | | +--Vertebrata (13) | | | | | | | +--Euteleostomi (13) | | | | | | | +--Archosauria (13) | | | | | | | +--Dinosauria (13) | | | | | | | +--Saurischia (13) | | | | | | | +--Theropoda (13) | | | | | | | +--Coelurosauria (13) | | | | | | | +--Aves (13) | | | | | | | +--Neognathae (13) | | | | | | | +--Passeriformes (12) | | | | | | | | | +--Corvoidea (5) | | | | | | | | | | | +--Irenidae (5) | | | | | | | | | | | +--Chloropsis hardwickii (5) | | | | | | | | | +--Timaliidae (7) | | | | | | | | | +--Pteruthius melanotis (7) | | | | | | | +--Musophagiformes (1) | | | | | | | +--Musophagidae (1) | | | | | | | +--Corythaeola cristata (great blue turaco) (1) | | | | | +--Arthropoda (3) | | | | | +--Hexapoda (2) | | | | | | | +--Insecta (2) | | | | | | | +--Pterygota (2) | | | | | | | +--Neoptera (2) | | | | | | | +--Endopterygota (2) | | | | | | | +--Coleoptera (2) | | | | | | | +--Polyphaga (2) | | | | | | | +--Cucujiformia (2) | | | | | | | +--Chrysomeloidea (1) | | | | | | | | | +--Chrysomelidae (1) | | | | | | | | | +--Bruchinae (1) | | | | | | | | | +--Bruchini (1) | | | | | | | | | +--Callosobruchus maculatus (cowpea weevil) (1) | | | | | | | +--Curculionidae (1) | | | | | | | +--Scolytinae (1) | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Acari (1) | | | | | +--Acariformes (1) | | | | | +--Sarcoptiformes (1) | | | | | +--Astigmata (1) | | | | | +--Psoroptidia (1) | | | | | +--Analgoidea (1) | | | | | +--Pyroglyphidae (1) | | | | | +--Pyroglyphinae (1) | | | | | +--Euroglyphus maynei (1) | | | +--Fungi (1) | | | | | +--Dikarya (1) | | | | | +--Basidiomycota (1) | | | | | +--Agaricomycotina (1) | | | | | +--Agaricomycetes (1) | | | | | +--Agaricomycetidae (1) | | | | | +--Agaricales (1) | | | | | +--Marasmiaceae (1) | | | | | +--mitosporicMarasmiaceae (1) | | | | | +--Moniliophthora perniciosa FA553 (1) | | | +--Viridiplantae (1) | | | | | +--Streptophyta (1) | | | | | +--Embryophyta (1) | | | | | +--Tracheophyta (1) | | | | | +--Spermatophyta (1) | | | | | +--Magnoliophyta (1) | | | | | +--Liliopsida (1) | | | | | +--Poales (1) | | | | | +--Poaceae (1) | | | | | +--BEPclade (1) | | | | | +--Ehrhartoideae (1) | | | | | +--Oryzeae (1) | | | | | +--Oryza sativa Indica Group (1) | | | +--Opisthokonta (12) | | | +--Metazoa (7) | | | | | +--Eumetazoa (7) | | | | | +--Bilateria (7) | | | | | +--Protostomia (7) | | | | | +--Ecdysozoa (7) | | | | | +--Nematoda (7) | | | | | +--Chromadorea (7) | | | | | +--Rhabditida (7) | | | | | +--Rhabditina (7) | | | | | +--Rhabditomorpha (7) | | | | | +--Rhabditoidea (7) | | | | | +--Rhabditidae (7) | | | | | +--Rhabditidaeincertaesedis (7) | | | | | +--Auanema (7) | | | | | +--Auanema sp. JU1783 (7) | | | +--Fungi (5) | | | +--Dikarya (5) | | | +--Ascomycota (5) | | | +--saccharomyceta (5) | | | +--Pezizomycotina (5) | | | +--leotiomyceta (5) | | | +--sordariomyceta (5) | | | +--Sordariomycetes (5) | | | +--Hypocreomycetidae (5) | | | +--Hypocreales (5) | | | +--Cordycipitaceae (5) | | | +--Beauveria (5) | | | +--Beauveria bassiana D1-5 (5) | +--Bacteria (627) | +--unclassifiedBacteria (1) | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | +--Proteobacteria (455) | | | +--gamma proteobacterium SS-5 (1) | | | +--Gammaproteobacteria (451) | | | | | +--unclassifiedGammaproteobacteria (6) | | | | | | | +--sulfur-oxidizingsymbionts (3) | | | | | | | | | +--Candidatus Thiodiazotropha endoloripes (2) | | | | | | | | | +--Candidatus Thiodiazotropha endolucinida (1) | | | | | | | +--Sedimenticola thiotaurini (1) | | | | | | | +--endosymbiont of unidentified scaly snail isolate Monju (2) | | | | | +--Enterobacterales (74) | | | | | | | +--Yersiniaceae (22) | | | | | | | | | +--Serratia sp. DD3 (4) | | | | | | | | | +--Ewingella (8) | | | | | | | | | | | +--Ewingella americana ATCC 33852 (8) | | | | | | | | | +--Rahnella (5) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (5) | | | | | | | | | +--Chania (5) | | | | | | | | | +--Chania multitudinisentens RB-25 (5) | | | | | | | +--Pectobacteriaceae (4) | | | | | | | | | +--Sodalis praecaptivus (3) | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | +--Morganellaceae (5) | | | | | | | | | +--Xenorhabdus (1) | | | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (1) | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | +--Providencia (3) | | | | | | | | | +--Providencia sneebia DSM 19967 (3) | | | | | | | +--Enterobacteriaceae (29) | | | | | | | | | +--Escherichia (4) | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (4) | | | | | | | | | +--Klebsiella sp. RIT-PI-d (9) | | | | | | | | | +--unclassifiedEnterobacteriaceae (2) | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (2) | | | | | | | | | +--Klebsiella michiganensis (5) | | | | | | | | | +--Mangrovibacter sp. MFB070 (2) | | | | | | | | | +--Buttiauxella (5) | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (5) | | | | | | | | | +--Atlantibacter (2) | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (2) | | | | | | | +--Erwiniaceae (9) | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | +--Erwinia sp. Leaf53 (2) | | | | | | | | | +--Tatumella (3) | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (3) | | | | | | | | | +--Erwinia gerundensis (3) | | | | | | | +--Hafniaceae (5) | | | | | | | +--Hafnia (5) | | | | | | | +--Hafnia alvei FB1 (5) | | | | | +--Aeromonadales (1) | | | | | | | +--Aeromonadaceae (1) | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1) | | | | | +--Orbales (3) | | | | | | | +--Orbaceae (3) | | | | | | | +--Frischella perrara (3) | | | | | +--Alteromonadales (7) | | | | | | | +--Alteromonadaceae (7) | | | | | | | +--Marinobacterium stanieri (1) | | | | | | | +--Marinobacterium sp. AN9 (4) | | | | | | | +--Alteromonas lipolytica (1) | | | | | | | +--Marinobacter sp. YCSA40 (1) | | | | | +--Vibrionales (9) | | | | | | | +--Vibrionaceae (9) | | | | | | | +--Photobacterium sp. Gung47 (2) | | | | | | | +--Enterovibrio coralii (3) | | | | | | | +--Grimontia hollisae CIP 101886 (4) | | | | | +--Salinisphaerales (2) | | | | | | | +--Salinisphaeraceae (2) | | | | | | | +--Salinisphaera shabanensis E1L3A (1) | | | | | | | +--Salinisphaera sp. MKB5 (1) | | | | | +--Cellvibrionales (1) | | | | | | | +--Halieaceae (1) | | | | | | | +--Pseudohaliea (1) | | | | | | | +--Pseudohaliea rubra DSM 19751 (1) | | | | | +--Xanthomonadales (7) | | | | | | | +--Rhodanobacteraceae (1) | | | | | | | | | +--Dokdonella (1) | | | | | | | | | +--Dokdonella koreensis DS-123 (1) | | | | | | | +--Xanthomonadaceae (6) | | | | | | | +--Pseudoxanthomonas dokdonensis (2) | | | | | | | +--Pseudoxanthomonas spadix BD-a59 (2) | | | | | | | +--Luteimonas aestuarii (1) | | | | | | | +--Pseudoxanthomonas sp. XC21-2 (1) | | | | | +--Chromatiales (6) | | | | | | | +--Ectothiorhodospiraceae (6) | | | | | | | +--Spiribacter curvatus (1) | | | | | | | +--Aquisalimonas asiatica (1) | | | | | | | +--Nitrococcus mobilis Nb-231 (1) | | | | | | | +--Thioalkalivibrio versutus (3) | | | | | +--Enterobacteriales (323) | | | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | | | +--Enterobacteriaceae (322) | | | | | | | +--Serratia fonticola (4) | | | | | | | +--Dickeya dadantii 3937 (6) | | | | | | | +--Shigella boydii CDC 3083-94 (4) | | | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | | | +--Cedecea neteri (3) | | | | | | | +--Leminorella richardii (1) | | | | | | | +--Serratia sp. ATCC 39006 (3) | | | | | | | +--Salmonella (14) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (14) | | | | | | | +--Escherichia coli 55989 (6) | | | | | | | +--Trabulsiella odontotermitis (2) | | | | | | | +--Pantoea ananatis LMG 20103 (11) | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (9) | | | | | | | +--Pectobacterium atrosepticum SCRI1043 (5) | | | | | | | +--Xenorhabdus innexi (3) | | | | | | | +--Escherichia coli E24377A (9) | | | | | | | +--Escherichia coli O157:H7 (4) | | | | | | | +--Serratia rubidaea (10) | | | | | | | +--Salmonella enterica subsp. arizonae (5) | | | | | | | +--Escherichia coli K-12 (13) | | | | | | | +--Biostraticola tofi (2) | | | | | | | +--Pantoea agglomerans (10) | | | | | | | +--Pantoea vagans (2) | | | | | | | +--Shigella dysenteriae Sd197 (3) | | | | | | | +--Yersinia ruckeri (7) | | | | | | | +--Escherichia coli O83:H1 str. NRG 857C (1) | | | | | | | +--Serratia odorifera DSM 4582 (5) | | | | | | | +--Escherichia coli O127:H6 str. E2348/69 (1) | | | | | | | +--Kluyvera cryocrescens (4) | | | | | | | +--Shigella sonnei Ss046 (7) | | | | | | | +--Erwinia tasmaniensis (9) | | | | | | | +--Gibbsiella quercinecans (4) | | | | | | | +--Tatumella morbirosei (9) | | | | | | | +--Budvicia aquatica (9) | | | | | | | +--Enterobacter gergoviae (8) | | | | | | | +--Enterobacter sp. 638 (4) | | | | | | | +--Citrobacter freundii (5) | | | | | | | +--Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis) (8) | | | | | | | +--Escherichia coli HS (8) | | | | | | | +--Escherichia coli BL21(DE3) (7) | | | | | | | +--Escherichia coli APEC O1 (1) | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (9) | | | | | | | +--Enterobacter (5) | | | | | | | | | +--Enterobacter cloacae SCF1 (5) | | | | | | | +--Serratia ficaria (11) | | | | | | | +--Citrobacter koseri ATCC BAA-895 (5) | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | +--Erwinia billingiae (2) | | | | | | | +--Shigella flexneri 2a str. 301 (4) | | | | | | | +--Yersinia pestis CO92 (7) | | | | | | | +--Edwardsiella hoshinae (6) | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (3) | | | | | | | +--Candidatus Erwinia dacicola (1) | | | | | | | +--Erwinia mallotivora (2) | | | | | | | +--Providencia stuartii (4) | | | | | | | +--Citrobacter rodentium ICC168 (6) | | | | | | | +--Escherichia coli S88 (1) | | | | | | | +--Escherichia blattae DSM 4481 (9) | | | | | | | +--Salmonella enterica subsp. enterica serovar Poona (10) | | | | | | | +--Klebsiella pneumoniae subsp. ozaenae (6) | | | | | | | +--Lonsdalea quercina (3) | | | | | +--Oceanospirillales (12) | | | | | +--Oleibacter marinus (1) | | | | | +--Neptuniibacter caesariensis (3) | | | | | +--Oceanospirillaceae (3) | | | | | | | +--Bacterioplanes sanyensis (1) | | | | | | | +--Marinobacterium sp. AK27 (1) | | | | | | | +--Osedax symbiont Rs1 (1) | | | | | +--Amphritea balenae (5) | | | +--gamma proteobacterium HRh1 (3) | +--Chlorobi (1) | | | +--Chlorobia (1) | | | +--Chlorobiales (1) | | | +--Chlorobiaceae (1) | | | +--Chlorobium/Pelodictyongroup (1) | | | +--Chlorobium bathyomarinum (1) | +--Pseudomonadota (170) | +--Gammaproteobacteria (168) | | | +--Alteromonadales (7) | | | | | +--Pseudoalteromonadaceae (1) | | | | | | | +--Psychrosphaera ytuae (1) | | | | | +--Echinimonadaceae (3) | | | | | | | +--Neiella litorisoli (1) | | | | | | | +--Echinimonas agarilytica (2) | | | | | +--Psychromonadaceae (1) | | | | | | | +--Corallincola holothuriorum (1) | | | | | +--Alteromonadaceae (2) | | | | | +--Alteromonadaceae bacterium 2753L.S.0a.02 (1) | | | | | +--Alteromonas/Salinimonasgroup (1) | | | | | +--Salinimonas iocasae (1) | | | +--Salinisphaerales (2) | | | | | +--Salinisphaeraceae (2) | | | | | +--Salinisphaera (2) | | | | | +--Salinisphaera japonica YTM-1 (2) | | | +--Enterobacterales (136) | | | | | +--Yersiniaceae (12) | | | | | | | +--Rouxiella badensis (4) | | | | | | | +--Chimaeribacter arupi (8) | | | | | +--Pectobacteriaceae (10) | | | | | | | +--Affinibrenneria salicis (4) | | | | | | | +--Acerihabitans arboris (6) | | | | | +--Morganellaceae (6) | | | | | | | +--Arsenophonus (6) | | | | | | | +--Arsenophonus endosymbiont of Aphis craccivora (2) | | | | | | | +--Arsenophonus sp. ENCA (3) | | | | | | | +--unclassifiedArsenophonus (1) | | | | | | | +--Arsenophonus endosymbiont of Bemisia tabaci Q2 (1) | | | | | +--Enterobacteriaceae (45) | | | | | | | +--Jejubacter calystegiae (2) | | | | | | | +--Kosakonia (5) | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (5) | | | | | | | +--Kluyvera genomosp. 3 (3) | | | | | | | +--Enterobacteriaceae bacterium RIT714 (9) | | | | | | | +--Klebsiella/Raoultellagroup (19) | | | | | | | | | +--Klebsiella indica (9) | | | | | | | | | +--Klebsiella (10) | | | | | | | | | +--Klebsiellapneumoniae (10) | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (10) | | | | | | | +--Enterobacteriaceaeincertaesedis (1) | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (1) | | | | | | | | | +--Symbiopectobacterium (1) | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (1) | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (6) | | | | | | | +--Tenebrionibacter intestinalis (6) | | | | | +--Budviciaceae (3) | | | | | | | +--Limnobaculum parvum (3) | | | | | +--Erwiniaceae (46) | | | | | | | +--Pantoea alhagi (5) | | | | | | | +--Erwinia sorbitola (15) | | | | | | | +--Erwiniaceae bacterium PD-1 (8) | | | | | | | +--Erwinia (12) | | | | | | | | | +--Erwinia sp. 198 (6) | | | | | | | | | +--Erwinia sp. OLSSP12 (6) | | | | | | | +--Pantoea (3) | | | | | | | | | +--Pantoea sp. M_5 (1) | | | | | | | | | +--Pantoea sp. Eser (2) | | | | | | | +--[Pantoea] beijingensis (3) | | | | | +--Enterobacterales bacterium CwR94 (4) | | | | | +--Hafniaceae (3) | | | | | | | +--Enterobacillus tribolii (3) | | | | | +--Bruguierivoracaceae (7) | | | | | +--Sodalis ligni (6) | | | | | +--Sodalis (1) | | | | | +--Sodalis-like endosymbiont of Proechinophthirus fluctus (1) | | | +--Cellvibrionales (4) | | | | | +--Halieaceae (4) | | | | | +--Chromatocurvus halotolerans (1) | | | | | +--Kineobactrum salinum (3) | | | +--Xanthomonadales (2) | | | | | +--Xanthomonadaceae (2) | | | | | +--Lysobacter (2) | | | | | +--Lysobacter sp. N42 (2) | | | +--Chromatiales (1) | | | | | +--Ectothiorhodospiraceae (1) | | | | | +--Thioalkalivibrio (1) | | | | | +--Thioalkalivibrio paradoxus ARh 1 (1) | | | +--Oceanospirillales (13) | | | | | +--Oleiphilaceae (2) | | | | | | | +--Oleiphilus (2) | | | | | | | +--Oleiphilus sp. HI0066 (2) | | | | | +--Oceanospirillaceae (10) | | | | | | | +--Pontibacterium sinense (2) | | | | | | | +--Amphritea (2) | | | | | | | | | +--Amphritea japonica ATCC BAA-1530 (2) | | | | | | | +--Marinobacterium (1) | | | | | | | | | +--Marinobacterium iners DSM 11526 (1) | | | | | | | +--Motiliproteus coralliicola (3) | | | | | | | +--Litoribrevibacter albus (2) | | | | | +--Pleioneaceae (1) | | | | | +--Aliikangiella marina (1) | | | +--Pseudomonadales (3) | | | +--Marinobacteraceae (2) | | | | | +--Marinobacter (2) | | | | | +--Marinobacter sp. B9-2 (1) | | | | | +--Marinobacter sp. R17 (1) | | | +--Pseudomonadaceae (1) | | | +--Permianibacter aggregans (1) | +--Zetaproteobacteria (2) | +--Mariprofundales (2) | +--Mariprofundaceae (2) | +--Mariprofundus erugo (2)