# Species tree for RF00021 # Generated from Rfam version 15.00 | +--Eukaryota (7) | | | +--Metazoa (6) | | | | | +--Chordata (4) | | | | | | | +--Craniata (4) | | | | | | | +--Vertebrata (4) | | | | | | | +--Euteleostomi (4) | | | | | | | +--Mammalia (1) | | | | | | | | | +--Eutheria (1) | | | | | | | | | +--Euarchontoglires (1) | | | | | | | | | +--Glires (1) | | | | | | | | | +--Rodentia (1) | | | | | | | | | +--Hystricognathi (1) | | | | | | | | | +--Bathyergidae (1) | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (1) | | | | | | | +--Archosauria (3) | | | | | | | +--Dinosauria (3) | | | | | | | +--Saurischia (3) | | | | | | | +--Theropoda (3) | | | | | | | +--Coelurosauria (3) | | | | | | | +--Aves (3) | | | | | | | +--Neognathae (3) | | | | | | | +--Passeriformes (3) | | | | | | | +--Corvoidea (1) | | | | | | | | | +--Irenidae (1) | | | | | | | | | +--Chloropsis hardwickii (1) | | | | | | | +--Sittidae (1) | | | | | | | | | +--Tichodroma muraria (1) | | | | | | | +--Timaliidae (1) | | | | | | | +--Pteruthius melanotis (1) | | | | | +--Arthropoda (2) | | | | | +--Hexapoda (2) | | | | | +--Insecta (2) | | | | | +--Pterygota (2) | | | | | +--Neoptera (2) | | | | | +--Endopterygota (2) | | | | | +--Coleoptera (1) | | | | | | | +--Polyphaga (1) | | | | | | | +--Cucujiformia (1) | | | | | | | +--Curculionidae (1) | | | | | | | +--Scolytinae (1) | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | +--Diptera (1) | | | | | +--Brachycera (1) | | | | | +--Muscomorpha (1) | | | | | +--Oestroidea (1) | | | | | +--Calliphoridae (1) | | | | | +--Luciliinae (1) | | | | | +--Lucilia cuprina (1) | | | +--Opisthokonta (1) | | | +--Fungi (1) | | | +--Dikarya (1) | | | +--Ascomycota (1) | | | +--saccharomyceta (1) | | | +--Pezizomycotina (1) | | | +--leotiomyceta (1) | | | +--sordariomyceta (1) | | | +--Sordariomycetes (1) | | | +--Hypocreomycetidae (1) | | | +--Hypocreales (1) | | | +--Cordycipitaceae (1) | | | +--Beauveria (1) | | | +--Beauveria bassiana D1-5 (1) | +--Bacteria (197) | | | +--unclassifiedBacteria (1) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | | | +--Proteobacteria (139) | | | | | +--Gammaproteobacteria (139) | | | | | +--Alteromonadales (15) | | | | | | | +--Shewanellaceae (14) | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | +--Shewanella sediminis HAW-EB3 (1) | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | +--Shewanella loihica PV-4 (1) | | | | | | | | | +--Shewanella fodinae (1) | | | | | | | | | +--Shewanella violacea DSS12 (1) | | | | | | | | | +--Shewanella algae (1) | | | | | | | | | +--Shewanella amazonensis SB2B (1) | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (1) | | | | | | | | | +--Shewanella pealeana ATCC 700345 (1) | | | | | | | | | +--Shewanella woodyi ATCC 51908 (1) | | | | | | | | | +--Shewanella denitrificans OS217 (1) | | | | | | | | | +--Shewanella spongiae (1) | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | +--Alteromonadaceae (1) | | | | | | | +--Agarivorans (1) | | | | | | | +--Agarivorans albus MKT 106 (1) | | | | | +--Enterobacterales (24) | | | | | | | +--Yersiniaceae (4) | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Ewingella (1) | | | | | | | | | | | +--Ewingella americana ATCC 33852 (1) | | | | | | | | | +--Rahnella (1) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (1) | | | | | | | | | +--Chania (1) | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | +--Sodalis praecaptivus (1) | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | +--Morganellaceae (5) | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (1) | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | +--Morganella (1) | | | | | | | | | | | +--Morganellamorganii (1) | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (1) | | | | | | | | | +--Providencia (1) | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | +--Enterobacteriaceae (7) | | | | | | | | | +--Klebsiella sp. RIT-PI-d (1) | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | +--unclassifiedEnterobacteriaceae (1) | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (1) | | | | | | | | | +--Klebsiella michiganensis (1) | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | | | +--Buttiauxella (1) | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (1) | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | +--Erwiniaceae (4) | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | +--Erwinia sp. Leaf53 (1) | | | | | | | | | +--Tatumella (1) | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | | | +--Erwinia gerundensis (1) | | | | | | | +--Hafniaceae (1) | | | | | | | +--Hafnia (1) | | | | | | | +--Hafnia alvei FB1 (1) | | | | | +--Vibrionales (35) | | | | | | | +--Vibrionaceae (35) | | | | | | | +--Vibrio palustris (1) | | | | | | | +--Photobacterium jeanii (1) | | | | | | | +--Vibrio sp. G21 (1) | | | | | | | +--Vibrio sp. R-40493 (1) | | | | | | | +--Vibrio furnissii (1) | | | | | | | +--Photobacterium lipolyticum (1) | | | | | | | +--Vibrio sp. qd031 (1) | | | | | | | +--Vibrio navarrensis (1) | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | +--Vibrio caribbenthicus ATCC BAA-2122 (1) | | | | | | | +--Enterovibrio coralii (1) | | | | | | | +--Photobacterium sp. Gung47 (1) | | | | | | | +--Vibrio sp. S2757 (1) | | | | | | | +--Vibrio cholerae O1 biovar El Tor str. N16961 (1) | | | | | | | +--Vibrio nigripulchritudo (1) | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | +--Vibrio nereis (1) | | | | | | | +--Photobacterium ganghwense (1) | | | | | | | +--Vibrio renipiscarius (1) | | | | | | | +--Vibrio fischeri ES114 (1) | | | | | | | +--Salinivibrio sp. KP-1 (1) | | | | | | | +--Photobacterium halotolerans (1) | | | | | | | +--Vibrio ishigakensis (1) | | | | | | | +--Vibrio parahaemolyticus RIMD 2210633 (1) | | | | | | | +--Photobacterium sp. CECT 7614 (1) | | | | | | | +--Grimontia hollisae CIP 101886 (1) | | | | | | | +--Vibrio (6) | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | +--Vibrioharveyigroup (1) | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (1) | | | | | | | | | +--Vibrio ezurae NBRC 102218 (1) | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | +--Vibrio aerogenes CECT 7868 (1) | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | +--Enterovibrio sp. sw014 (1) | | | | | | | +--Photobacterium aquimaris (1) | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | +--Celerinatantimonadaceae (1) | | | | | | | +--Celerinatantimonas diazotrophica (1) | | | | | +--Aeromonadales (2) | | | | | | | +--Aeromonadaceae (2) | | | | | | | +--Aeromonas simiae (1) | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1) | | | | | +--Enterobacteriales (62) | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | +--Enterobacteriaceae (61) | | | | | +--Serratia fonticola (1) | | | | | +--Brenneria rubrifaciens (1) | | | | | +--Dickeya dadantii 3937 (1) | | | | | +--Shigella boydii CDC 3083-94 (1) | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | +--Xenorhabdus japonica (1) | | | | | +--Cedecea neteri (1) | | | | | +--Serratia sp. ATCC 39006 (1) | | | | | +--Escherichia coli 55989 (1) | | | | | +--Salmonella (1) | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | +--Trabulsiella odontotermitis (1) | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | +--Pectobacterium atrosepticum SCRI1043 (1) | | | | | +--Xenorhabdus innexi (1) | | | | | +--Escherichia coli E24377A (1) | | | | | +--Escherichia coli O157:H7 (1) | | | | | +--Escherichia coli K-12 (1) | | | | | +--Serratia rubidaea (1) | | | | | +--Salmonella enterica subsp. arizonae (1) | | | | | +--Biostraticola tofi (1) | | | | | +--Pantoea agglomerans (1) | | | | | +--Shigella dysenteriae Sd197 (1) | | | | | +--Pantoea vagans (1) | | | | | +--Escherichia coli O83:H1 str. NRG 857C (1) | | | | | +--Yersinia ruckeri (1) | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | +--Kluyvera cryocrescens (1) | | | | | +--Escherichia coli O127:H6 str. E2348/69 (1) | | | | | +--Shigella sonnei Ss046 (1) | | | | | +--Erwinia tasmaniensis (1) | | | | | +--Gibbsiella quercinecans (1) | | | | | +--Tatumella morbirosei (1) | | | | | +--Xenorhabdus koppenhoeferi (1) | | | | | +--Enterobacter sp. 638 (1) | | | | | +--Enterobacter gergoviae (1) | | | | | +--Citrobacter freundii (1) | | | | | +--Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis) (1) | | | | | +--Xenorhabdus cabanillasii (1) | | | | | +--Escherichia coli HS (1) | | | | | +--Escherichia coli BL21(DE3) (1) | | | | | +--Escherichia coli APEC O1 (1) | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | +--Enterobacter (1) | | | | | | | +--Enterobacter cloacae SCF1 (1) | | | | | +--Serratia ficaria (1) | | | | | +--Citrobacter koseri ATCC BAA-895 (1) | | | | | +--Escherichia coli CFT073 (1) | | | | | +--Erwinia billingiae (1) | | | | | +--Yersinia pestis CO92 (1) | | | | | +--Shigella flexneri 2a str. 301 (1) | | | | | +--Edwardsiella hoshinae (1) | | | | | +--Brenneria goodwinii (1) | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | +--Candidatus Erwinia dacicola (1) | | | | | +--Erwinia mallotivora (1) | | | | | +--Providencia stuartii (1) | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | +--Escherichia coli S88 (1) | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | +--Salmonella enterica subsp. enterica serovar Poona (1) | | | | | +--Lonsdalea quercina (1) | | | +--Pseudomonadota (57) | | | +--Gammaproteobacteria (57) | | | +--Alteromonadales (9) | | | | | +--Shewanellaceae (6) | | | | | | | +--Parashewanella curva (1) | | | | | | | +--Shewanella aestuarii (1) | | | | | | | +--Shewanella salipaludis (1) | | | | | | | +--Shewanella gelidii (1) | | | | | | | +--Shewanella (1) | | | | | | | | | +--Shewanella sp. SNU WT4 (1) | | | | | | | +--Shewanella cyperi (1) | | | | | +--Echinimonadaceae (2) | | | | | | | +--Neiella litorisoli (1) | | | | | | | +--Echinimonas agarilytica (1) | | | | | +--Alteromonadaceae (1) | | | | | +--Alginatibacterium sediminis (1) | | | +--Enterobacterales (30) | | | | | +--Yersiniaceae (2) | | | | | | | +--Rouxiella badensis (1) | | | | | | | +--Chimaeribacter arupi (1) | | | | | +--Enterobacteriaceae (10) | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | +--Kosakonia (1) | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (1) | | | | | | | +--Citrobacter (1) | | | | | | | | | +--Citrobacter sp. JGM124 (1) | | | | | | | +--Kluyvera genomosp. 3 (1) | | | | | | | +--Enterobacteriaceae bacterium RIT714 (1) | | | | | | | +--Klebsiella/Raoultellagroup (2) | | | | | | | | | +--Klebsiella (1) | | | | | | | | | | | +--Klebsiellapneumoniae (1) | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (1) | | | | | | | | | +--Klebsiella indica (1) | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (1) | | | | | | | | | +--Tenebrionibacter intestinalis (1) | | | | | | | +--Enterobacteriaceaeincertaesedis (2) | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (2) | | | | | | | +--Symbiopectobacterium (2) | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (1) | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (1) | | | | | +--Enterobacterales bacterium CwR94 (1) | | | | | +--Hafniaceae (1) | | | | | | | +--Enterobacillus tribolii (1) | | | | | +--Pectobacteriaceae (2) | | | | | | | +--Affinibrenneria salicis (1) | | | | | | | +--Acerihabitans arboris (1) | | | | | +--Morganellaceae (2) | | | | | | | +--Providencia (1) | | | | | | | | | +--Providencia heimbachae ATCC 35613 (1) | | | | | | | +--Proteus (1) | | | | | | | +--Proteus myxofaciens ATCC 19692 (1) | | | | | +--Erwiniaceae (10) | | | | | | | +--Izhakiella capsodis (1) | | | | | | | +--Pantoea alhagi (1) | | | | | | | +--Erwinia sorbitola (1) | | | | | | | +--Erwiniaceae bacterium PD-1 (1) | | | | | | | +--Erwinia (2) | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | | | +--Erwinia sp. OLSSP12 (1) | | | | | | | +--Pantoea (3) | | | | | | | | | +--Pantoea sp. M_5 (2) | | | | | | | | | +--Pantoea sp. Eser (1) | | | | | | | +--[Pantoea] beijingensis (1) | | | | | +--Bruguierivoracaceae (2) | | | | | +--Sodalis ligni (1) | | | | | +--Sodalis (1) | | | | | +--Sodalis-like symbiont of Bactericera trigonica (1) | | | +--Vibrionales (18) | | | +--Vibrionaceae (18) | | | +--Vibrio thalassae (1) | | | +--Vibrio viridaestus (1) | | | +--Vibrio ziniensis (1) | | | +--Vibrio eleionomae (1) | | | +--Vibrio agarilyticus (1) | | | +--Vibrio ostreae (1) | | | +--Vibrio toranzoniae (1) | | | +--Veronia nyctiphanis (1) | | | +--Vibrio paucivorans (1) | | | +--Vibrio aquimaris (1) | | | +--Vibrio astriarenae (1) | | | +--Vibrio (6) | | | | | +--Vibrio sp. 99-8-1 (1) | | | | | +--Vibrio tapetis subsp. tapetis (1) | | | | | +--Vibrio sp. V28_P6S34P95 (1) | | | | | +--Vibrio sp. HA2012 (1) | | | | | +--Vibrio ruber DSM 16370 (1) | | | | | +--Vibrio sp. 10N.286.49.B3 (1) | | | +--Vibrio gelatinilyticus (1) | +--Plautia stali symbiont (1)