Seed sequence alignment for RF03170

URS0000C380DA_745776/1-87 Deinococcus gobiensis I-0 0.0 URS0000D66611_12908/1-86 unclassified sequences 0.0 URS0000D66ED1_12908/1-109 unclassified sequences 0.0 URS0000D6A76E_12908/1-109 unclassified sequences 0.0 URS0000D6A6E6_12908/1-110 unclassified sequences 0.0 URS0000D6ABC3_12908/1-110 unclassified sequences 0.0 URS0000D6BD4A_12908/1-110 unclassified sequences 0.0 URS0000D664FC_12908/1-110 unclassified sequences 0.0 URS0000AB75B9_546414/1-84 Deinococcus deserti VCD115 0.0 URS0000C05FF4_937777/1-85 Deinococcus peraridilitoris DSM 19664 0.0 URS0000D65F06_317577/1-86 Deinococcus ficus 0.0 URS0000D6CA48_12908/1-85 unclassified sequences 0.0 URS0000D6B222_12908/1-82 unclassified sequences 0.0 URS0000D6A4A1_12908/1-82 unclassified sequences 0.0 URS0000D680F8_12908/1-82 unclassified sequences 0.0 URS0000D675B2_12908/1-85 unclassified sequences 0.0 URS0000D6BEF3_12908/1-100 unclassified sequences 0.0 URS0000D6C907_12908/1-85 unclassified sequences 0.0 URS0000D659C9_12908/1-85 unclassified sequences 0.0 URS0000D6BCFE_12908/1-85 unclassified sequences 0.0 URS0000D69405_12908/1-85 unclassified sequences 0.0 URS0000D65D32_12908/1-86 unclassified sequences 0.0 URS0000D68BD6_12908/1-85 unclassified sequences 0.0 URS0000D6B21B_12908/1-86 unclassified sequences 0.0 URS0000D65C44_12908/1-85 unclassified sequences 0.0 URS0000D66818_12908/1-87 unclassified sequences 0.0 URS0000D69C3D_12908/1-86 unclassified sequences 0.0 URS0000D66E94_12908/1-84 unclassified sequences 0.0 URS0000D6B3FE_12908/1-84 unclassified sequences 0.0 URS0000D65CEE_12908/1-85 unclassified sequences 0.0

GAAUCACCAGGAGGCAAGGAUCCUCA.AC.UACGUUAUu..CGGGCACCUU.g........................AGUUGAGAGGAGCUAGUGGUGCGCCCGG.CCUGGAGAUCA -GACACGAGGGCAGCGAUGACCCGCC.GG.GCGAUCUG...UGGUCGCCAUgu.......................gCCCGGCGUCGAGC-AGUGGCGCGCCCGGgCCGUCAGAUC- CUGCCGCCGGGACGCAGUGAUCCUCG.CA.GGGUCGCA...CGGUCGCCUCgggucggccucgugucggcucgac..CUGCGAGGGGAGCGAGUGGCGAGCCCGA.CCCGGGUGUCC CCGCCGCCGGGAAGCGCUGAUCCUCG.--.CAGGCUGUga.CGGUCGCCUCgagucggccucgugucgauucgacuuG--CGAGGGGAGCGAGUGGCGAGCCCGC.CCCGGGUGUCC UCACCGCCGGGAAGCGAUGAUCCUCG.AG.-GGGACCAga.CGGUCGCCACgaugaggcguuggccucaucagcccg--UCGAGGGGAGCUAGUGGCGAGCCCGA.CCCGGGAGUGC UCACCGCCGGGAAGCGAUGAUCCUCGaGG.-GGAGCUGa..CGGUCGCUCGgacgaggccucggccucacccgcccu--CCGAGGGGAGCCAGUGGCGAGCCCGA.CCCGGGAGUGC UCACCGCCGGGAAGCGAUGAUCCUCG.AG.-GGGAGCUga.CGGUCGCUCGgacgaggccucggccucacccgccca--UCGAGGGGAGCCAGUGGCGAGCCCGA.CCCGGGAGUGC UCACCGCCGGGAAGCGAUGAUCCUCG.AG.-GGGAGCUga.CGGUCGCUCGgaggaggccaaggccucguccgcccg--UCGAGGGGAGCUAGUGGCGAGCCCGA.CCCGGGAGUGC ACUGUACUGAGAUGCAUCGACGCUUG.CC.CUGUAUA-...CGGUCACCUG..........................GGUCAAGCCGAGCGAAUGGUGAGCCCGA.CUCAAUGGAGA AAUUUCA-CGGAAGCGUUGAAGCCUG.CCuCAGUACA-...CGGUCACCUU.a........................GGGCAGGUGGAGCCAAUGGUGAGCCCGG.CCAGAGGAGUA UUUCACUUGGGAAGCGAUGAUCCCUG.CCuCAGUACA-...CGGUCACCUC.a........................GGGCAGGGGGAGCCAGUGGUGAGCCCGG.CCCCAUAGGAG CGUCUCCGCGGCUGCGAUAAGGCACG.GUuCAUAUCC-...CGGCCGCCCG..........................GACCGUGCAUAGCUACUGGCGAGCCCGC.CAGCAUCGAGG -UCUCCGCCGGCUGCGAUAAGGCACG.GUuCAUAUCC-...CGGCCGCCUG..........................GACCGUGCAUAGCUACUGGCGAGCCCG-.CCAGCAUCGA- -UCUCCGCUGGCUGCGAUAAGGCACG.GUuCAUAUCC-...CGGCCGCCCG..........................GACCGUGCAUAGCUACUGGCGAGCCCG-.CCAGCAUCGA- -UCUCCGCCGGCUGCGAUAAGGCACG.GUuCAUAUCC-...CGGCCGCCCG..........................GACCGUGCAUAGCUACUGGCGAGCCCG-.CCAGCAUCGA- -CCCUAGCGGGAAGCUGAGAUGCGCG.GC.UAAACCUUu..CGGUCGCCGU.a........................GGUCGCGCGGAGC-AAUGGCGAGCCCGAuCCCGUUGCAG- CCGGGAACGGGAGGCGUUGACGCGCG.GC.GCGCCCAAcuaCGGUCGCCCUacgcugcccgaa..............UGCCGCGCUGAGCCAAUGGCGAGCCCGA.CCCGUGCACGA AAUCGGAUGGGAGGCAAGGACGCGCG.GC.UCCCUACU...CGGUCGCCCG..........................AGCCGCGCCGAGCCACUGGCGAGCCCGA.CCCGUCCAGGG AAUCGGAUGGGAGGCAAUGACGCGCG.GC.UCCCUACU...CGGUCGCCCG..........................AGCCGCGCCGAGCCACUGGCGAGCCCGA.CCCGUCCAGGG UAACGAACGGGGAGCAUCGACGCGCG.GC.UCUUCCUU...UGGUCGCCCG..........................AACCGCGCCGAGCCACUGGCGAGCCCGA.CCCGUCUCACU CUACGAACGGGGAGCAUCGACGCGCG.GC.UCUCCCUC...CGGUCGCCCG..........................AGCCGCGCCGAGCCAGUGGCGAGCCCGA.CCCGUCCCACC UGCAGUUCGGGAAGCUUUGAUGCGUG.AC.CCCAACAU...CGGUCGCCUGua........................GGUCACGCGGAGC-AGUGGCGAGCCCGG.UCCCGGCCGUG CGAGCAGGCGGAGGCGUCGACGCGCG.UC.UCCAGCUU...CGGUCGCCUG..........................AGUCGCGAAGAGCCACUGGCGAGCCCGU.CCGCCUGCGUG UCCGUUCUGGGAGGCGUUGAAACGCGuGC.UCGUGUUC...CGGUCGCCUG..........................AGCCGCGUUGAGCCACUGGCGAGCCCGA.CCCCGUUCGCA -CCAGUACGGGAAGCGAAGACACGUG.AU.CCGCCC--...CGGUCGCCGU......................accgGAUCACGUCGAGC-AGUGGCGAGCCCGGuCCCGUGUGAG- UCCAAGACGGGAAGCAAAGACGCGUG.AU.CCACUC--...CGGUCGCCGA......................accgGAUCACGUCGAGC-AGUGGCGAGCCCGGuCCCGUGUGAGA CGACAACCGGGAAGCGUUGAUGCGUG.GU.CCACCGAA...CGGUCGCCUU........................cgGACCACGAGGAGC-AGUGGCGAGCCCGA.UCCCGAUCUGC GGACAUACGGGAAGCGUUGAUGCGUG.GU.CCUUCGAAc..CGGUCGCCUU........................cgGAGCACGCGGAGC-AGUGGCGAGCCCGAuCCCGUCC---- UGUCCUGCGGGUGGUGAGGACGCGCG.GA.CCAUACC-...CGGCCGCCCG..........................GCCCGCGUCGAACCACUGGCGAGCCCGA.CCCGCAGUGGA CGAGCGACGGGAGGCGAUGAAGCGCG.GU.CAAGAUCC...CGGUCGCCGU..........................GACCGCGUGGAGCCAGUGGCGAGCCCGA.CCCACCGCGUC