Rfam: Seed sequence alignment for RF03161

URS0001A23933_12908/1-58 unclassified sequences 0.0 URS0001A239F7_12908/1-68 unclassified sequences 0.0 URS0001A24986_12908/1-68 unclassified sequences 0.0 URS0001A23D09_12908/1-67 unclassified sequences 0.0 URS0001A2404B_12908/1-68 unclassified sequences 0.0 URS0001A2452F_12908/1-57 unclassified sequences 0.0 URS0001A23665_12908/1-62 unclassified sequences 0.0 URS0001A2468D_12908/1-60 unclassified sequences 0.0 URS0001A2397E_12908/1-61 unclassified sequences 0.0 URS0001A23BC3_12908/1-61 unclassified sequences 0.0 URS0001A23F9C_12908/1-61 unclassified sequences 0.0 URS0001A2491B_12908/1-61 unclassified sequences 0.0 URS0001A249B9_12908/1-69 unclassified sequences 0.0 URS0001A237D0_12908/1-55 unclassified sequences 0.0 URS0001A233DA_12908/1-65 unclassified sequences 0.0 URS0001A232C9_12908/1-57 unclassified sequences 0.0 URS0001A249C3_12908/1-55 unclassified sequences 0.0 URS0001A245DA_12908/1-58 unclassified sequences 0.0 URS0001A234A9_12908/1-58 unclassified sequences 0.0 URS0001A234C6_12908/1-58 unclassified sequences 0.0 URS0001A2336A_12908/1-57 unclassified sequences 0.0 URS0001A249BD_12908/1-58 unclassified sequences 0.0 URS0001A23AA4_12908/1-58 unclassified sequences 0.0 URS0001A233F6_12908/1-58 unclassified sequences 0.0 URS0001A24B29_12908/1-58 unclassified sequences 0.0 URS0001A240FE_12908/1-65 unclassified sequences 0.0 URS0001A2487E_12908/1-65 unclassified sequences 0.0 URS0001A231FE_12908/1-69 unclassified sequences 0.0 URS0001A239CF_12908/1-59 unclassified sequences 0.0 URS0001A242CC_12908/1-67 unclassified sequences 0.0

UACAU.UUGCAACU.............GCGA---...........AACG-.................---UCGC.....................................AUAC.AUAAA.AAUCAUU...AA-AA..UAAUAUUGGCAUG UAUAU.UUGCGGCU.............CAUUCCUga.........AAA--...............ucAGGUGUG.....................................CUAC.AUAAA.AAUUAUU...UAAAA..AAAUAUUGGAAUG UAUAU.UUGCCGCU.............CAUUCUUga.........AAA--...............ucAGGAAUU.....................................UUAC.AUAAA.AAUUAUU...UAAAA..AAAUAUUGGAAUG UAUAU.UUGCCGCU.............CAUUCCUga.........AAA--...............ucAGGUAUG.....................................UUAC.AUAAA.AAUUAUU...UA-AA..AAAUAUUGGAAUG UAUAU.UUGCCGCU.............CAUUCCUga.........AAA--...............ucAGGUAUG.....................................UUAC.AUAAA.AAUUAUU...UAAAA..AAAUAUUGGAAUG UAUAU.UUGCAGCC.............UCA----...........UUUU-.................----UGA....................................gGUAC.AUAAG.AAUCAUU...UA-AA..CAAUAUUGGAAUG UAUCU.UUGCCGCU.............GAUGGA-...........AAA--.................-UCCAUU....................................uGUAC.AUAAA.AAUCAUU...GA-AA..UAAUAUUGGAAUG UAUAU.UUGCCAAC.............CACU---...........UUAU-.................---AGUG....................................uUUAC.AUAAA.AAUCAUU...AAAAU..UAAUAUUGGCAUG UAUAU.UUGCCAAC.............CACU---...........UUUAU.................---AGUG....................................uUUAC.AUAAA.AAUCAUU...AAAAU..UAAUAUUGGCAUG UAUAU.UUGCCAAC.............CACU---...........UUAAU.................---AGUG....................................uUUAC.AUAAA.AAUCAUU...AAAAU..UAAUAUUGGCAUG UAUAU.UUGCCAAC.............CACU---...........UUGAU.................---AGUG....................................uUUAC.AUAAA.AAUCAUU...AAAAU..UAAUAUUGGCAUG UAUAU.UUGCCGAC.............CACU---...........UAUAU.................---AGUG....................................uUUAC.AUAAA.AAUCAUU...AAAAU..UAAUAUUGGCAUG UACUU.UUGCAACCgu...........CUAAACCga.........GAG--...............ucGGUGUGG.....................................CUAC.AUAAA.AAUUAUU...UA-UA..CAAUAUUGGCAUG UAUCU.UUGCAUGG.............CA-----...........AUUU-.................-----UG....................................cAUAC.AUAAA.AAUCAUU...UA-AA..UAAUAUUGGCAUG UAUAU.UUGCACGC.............UGUCCGA...........AAA--.................UCGGCAG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUCU.UUGCGGCG.............CUUA---...........AAA--.................---UAUG....................................cAUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCCCCG.............CUU----...........AAC--.................----AAG....................................cAUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCCCCG.............CUUA---...........AUAA-.................---UAAG....................................cAUAC.AUAAC.AAUUAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCACCG.............CUUA---...........AUAA-.................---UAAG....................................cAUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCACCG.............CUUA---...........AUAA-.................---UAAG....................................cAUAC.AUAAA.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCACCG.............CUUA---...........AUAA-.................---UAAG....................................cAUAC.AUAA-.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCCCCG.............CUUA---...........AUAA-.................---UAAG....................................cAUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCACCG.............CCUA---...........AUAA-.................---UAGG....................................cAUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUAU.UUGCACCG.............CUUA---...........AUAA-.................---UAGG....................................cGUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UAUCU.UUGCAGCG.............CCUU---...........AAAA-.................---AAGG....................................cAUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUAGCAUG UACCU.UUGCACCC.............AAUCAGGa..........AAA--................uCCUGAAU.....................................UUAC.AUAAU.AAUUAUU...UA-AA..UAAUAUUGGCAUG UACCU.UUGCACCC.............AAUCAGG...........AUAGA.................CCUGAGG.....................................UUAC.AUAAA.AAUUAUU...UA-AA..UAAUAUUGGCAUG UAUCU.UUGCACGC.............UGAUUC-...........ACUUAaaac.............-GAAUCG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAACU.UUGCAGCC.............CUGAA--...........UUU--.................--UUCAG....................................gCUAC.AUAAC.AAUCAU-...UA-AA..UAAUAUUGGAAUG UAUCU.UUGCAAAC.............UUGAAAG...........AAGAC.................CUUUCAA....................................cAUAC.AUAAC.AAUCAUU...UACAA..UAAUAUUAGCAUG