Seed sequence alignment for RF03161

URS0001A242F3_1423322/1-67 Flavobacterium sp. ABG 0.0 URS0001A23B62_12908/1-67 unclassified sequences 0.0 URS0001A244AE_1189620/1-67 Flavobacterium sp. ACAM 123 0.0 URS0001A2423C_12908/1-48 unclassified sequences 0.0 URS0001A235B4_12908/1-48 unclassified sequences 0.0 URS0001A2493E_1461577/1-47 Weeksella massiliensis 0.0 URS0001A23AE5_865938/1-48 Weeksella virosa DSM 16922 0.0 URS0001A2477E_867902/1-53 Ornithobacterium rhinotracheale DSM 15997 0.0 URS0001A24110_12908/1-47 unclassified sequences 0.0 URS0001A2409C_12908/1-48 unclassified sequences 0.0 URS0001A23A56_12908/1-47 unclassified sequences 0.0 URS0001A235E9_12908/1-47 unclassified sequences 0.0 URS0001A2440A_12908/1-47 unclassified sequences 0.0 URS0001A23245_1218108/1-47 Empedobacter brevis NBRC 14943 = ATCC 43319 0.0 URS0001A23245_12908/1-47 unclassified sequences 0.0 URS0001A23245_343874/1-47 Wautersiella falsenii 0.0 URS0001A237C5_883096/1-49 Bergeyella zoohelcum ATCC 43767 0.0 URS0001A237C5_883098/1-49 Bergeyella zoohelcum CCUG 30536 0.0 URS0001A23EB5_12908/1-66 unclassified sequences 0.0 URS0001A238AC_12908/1-66 unclassified sequences 0.0 URS0001A23FA0_12908/1-66 unclassified sequences 0.0 URS0001A2434B_12908/1-66 unclassified sequences 0.0 URS0001A23E32_12908/1-66 unclassified sequences 0.0 URS0001A23233_12908/1-66 unclassified sequences 0.0 URS0001A233E0_12908/1-65 unclassified sequences 0.0 URS0001A23B45_12908/1-65 unclassified sequences 0.0 URS0001A23E06_12908/1-66 unclassified sequences 0.0 URS0001A233E8_12908/1-66 unclassified sequences 0.0 URS0001A23659_12908/1-66 unclassified sequences 0.0 URS0001A246E6_12908/1-65 unclassified sequences 0.0
UAAUU.UUGCACCC.............GUCUUACa..........AGAGA................uGUAUGAC.....................................AUAC.AUAAA.AAUCAUU...AA-AU..AAAUAUUGGAAUG UACUU.UUGCACCC.............GUCCUACa..........AUAGC................uGUAUGGC.....................................AUAC.AUAAA.AAUCAUU...AA-AC..AAAUAUUGGAAUG UAUCU.UUGCACCC.............GUCAUACa..........AUAGC................uGUGUGGC.....................................AUAC.AUAAA.AAUCAUU...AA-AC..AAAUAUUGGAAUG UAUAU.UUGCACCUcau..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUUAUU...AA-AA..CAAUAUUGGCAUG UAUCU.UUGCACCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAAUU.UUGCACCUca...........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UACUU.UUGCACCUcaa..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UACUU.UUGCACCUcaaaaca......-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UAAAA..CAAUAUUGGAAUG UACUU.UUGCAGCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAU-...UA-AA..UAAUAUUGGCAUG UACUU.UUGCAGCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UACAU.UUGCACCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAU-...UA-AA..UAAUAUUGGCAUG UACUU.UUGCACCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAU-...UA-AA..UAAUAUUGGCAUG UACUU.UUGCACCUcga..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAU-...UA-AA..UAAUAUUUGCAUG UACAU.UUGCACCUcau..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUUAU-...UA-AA..UAAUAUUGGCAUG UACAU.UUGCACCUcau..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUUAU-...UA-AA..UAAUAUUGGCAUG UACAU.UUGCACCUcau..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUUAU-...UA-AA..UAAUAUUGGCAUG UACAU.UUGCACCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAAAAUG UACAU.UUGCACCUcgu..........-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAAAAUG UACAU.UUGCAACC.............UCAAGAA...........AAA--.................UUUUUGG...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUUGCAUG UACAU.UUGCACCC.............UCAAG--...........AAAAGaa...............--CUUGA...................................guUUAC.AUAAU.AAUUAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACCC.............UCAAGA-...........AAAGA.................-UCUUGA...................................guUUAC.AUAAU.AAUUAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACCC.............UCAAGA-...........AAAGA.................-UCUUGG...................................guUUAC.AUAAA.AAUCAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACCC.............UCAAGA-...........AAAAA.................-UCUUGG...................................guUUAC.AUAAU.AAUAAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACCC.............UCAAGA-...........AAAAA.................-UCUUGG...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACC-.............UCAAGA-...........AAAAA.................-UCUUGG...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACCC.............UCAAGA-...........GAAA-.................-UCUUGG...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCACCC.............UCAAGAA...........AAG--.................UUCUUGA...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUAGCAUG UACAU.UUGCACCC.............UCAAGAA...........AAG--.................UUCUUGA...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUGGCAUG UACAU.UUGCAACU.............UCAAGAA...........AAA--.................UUCUUGA...................................guUUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUAGCAUG UAUCU.UUGCACCC.............GAAUUGA...........AAAA-.................UCAAUUC.....................................AUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAGCAUG

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