Rfam: Seed sequence alignment for RF03161

URS0001A23459_12908/1-67 unclassified sequences 0.0 URS0001A23D29_12908/1-67 unclassified sequences 0.0 URS0001A240C1_391598/1-67 Flavobacteria bacterium BAL38 0.0 URS0001A240C1_12908/1-67 unclassified sequences 0.0 URS0001A241E4_12908/1-67 unclassified sequences 0.0 URS0001A23660_12908/1-67 unclassified sequences 0.0 URS0001A247BE_12908/1-67 unclassified sequences 0.0 URS0001A2438A_12908/1-57 unclassified sequences 0.0 URS0001A23737_12908/1-55 unclassified sequences 0.0 URS0001A246C8_553177/1-56 Capnocytophaga sputigena ATCC 33612 0.0 URS0001A246C8_12908/1-56 unclassified sequences 0.0 URS0001A246C8_1035193/1-56 Capnocytophaga sp. oral taxon 326 str. F0382 0.0 URS0001A23E65_12908/1-57 unclassified sequences 0.0 URS0001A23AAE_12908/1-56 unclassified sequences 0.0 URS0001A23259_12908/1-56 unclassified sequences 0.0 URS0001A2336E_12908/1-56 unclassified sequences 0.0 URS0001A23C5D_12908/1-56 unclassified sequences 0.0 URS0001A240C2_12908/1-56 unclassified sequences 0.0 URS0001A24052_12908/1-57 unclassified sequences 0.0 URS0001A2409B_12908/1-56 unclassified sequences 0.0 URS0001A2466D_12908/1-56 unclassified sequences 0.0 URS0001A23C7A_12908/1-56 unclassified sequences 0.0 URS0001A249E3_12908/1-56 unclassified sequences 0.0 URS0001A23274_12908/1-57 unclassified sequences 0.0 URS0001A23D77_12908/1-57 unclassified sequences 0.0 URS0001A24572_12908/1-57 unclassified sequences 0.0 URS0001A23714_12908/1-58 unclassified sequences 0.0 URS0001A24A06_12908/1-56 unclassified sequences 0.0 URS0001A23E7D_12908/1-57 unclassified sequences 0.0 URS0001A2474F_12908/1-57 unclassified sequences 0.0

UACCU.UUGCAACC.............GAAUUG-...........CAACAaua..............-CAAUUC.....................................AUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAGCAUG UACCU.UUGCAUCC.............GAAUUG-...........CAACNaua..............-CAAUUC.....................................AUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAGCAUG UACCU.UUGCAUCC.............GAAUUG-...........CAACCaua..............-CAAUUC.....................................AUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAGCAUG UACCU.UUGCAUCC.............GAAUUG-...........CAACCaua..............-CAAUUC.....................................AUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAGCAUG UACCU.UUGCAUCC.............GAAUUG-...........CAACAaua..............-CAAUUC.....................................AUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUAGCAUG UAUAU.UUGCCCCC.............UAUUUUA...........GUUAA.................UAGAAUA...................................ucAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGACCCC.............UAUUUUA...........GUUAA.................UAGAAUA...................................ucAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCGCCGaugauauaagcc.-------...........-----.................-------.....................................-UAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UACUU.UUGCCCCC.............GA-----...........AAAAC.................-----UC.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UACCU.UUGCGCCC.............GAA----...........-AAAA.................----UUC.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UACCU.UUGCGCCC.............GAA----...........-AAAA.................----UUC.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UACCU.UUGCGCCC.............GAA----...........-AAAA.................----UUC.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UACCU.UUGCGCCCga...........AA-----...........AAAAA.................-----UU.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UACCU.UUGCGGCCg............AAA----...........AAA--.................----UUU.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UACCU.UUGCGCCCg............AAA----...........AAA--.................----UUU.....................................GUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UAUAU.UUGCACCG.............CU-----...........AAAU-.................-----GG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUAU.UUGCGCCG.............CU-----...........GAAU-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGAAUG UAUAU.UUGCGCCG.............CU-----...........GAAU-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUAU.UUGCGCCG.............CU-----...........GAAU-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA.aCAAUAUUGGCAUG UAUAU.UUGCGCCG.............CU-----...........GAAU-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..CAAUAUUGGCAUG UAUAU.UUGCGCCG.............CU-----...........GAUU-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUAU.UUGCGCCG.............CU-----...........AAAG-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUAU.UUGCGCCG.............CU-----...........GAAG-.................-----AG....................................cAUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUAU.UUGCGCCG.............CUAA---...........UAU--.................---UUGC.....................................AUAC.AUAAU.AAUCAUU...AA-AU..UAAUAUUGGAAUG UAUAU.UUGCACCA.............CUU----...........AUAU-.................----AAG....................................uAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCGCCA.............CU-----...........GGUAUa................-----AG....................................uAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCGCCG.............CUG----...........AUAU-.................----CAG....................................cAUAC.AUAAU.GAUCAAU...UUAAA..UAAUAUUGGAAUG UAUAU.UUGCGCCG.............CU-----...........GAUAG.................-----AG....................................cAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCGCCG.............CU-----...........GAUAUa................-----AG....................................cAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCGCCG.............CUA----...........UUUA-.................----UAG....................................cAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG