Rfam: Seed sequence alignment for RF03161

URS0001A23529_12908/1-67 unclassified sequences 0.0 URS0001A23DDD_12908/1-67 unclassified sequences 0.0 URS0001A2394C_12908/1-67 unclassified sequences 0.0 URS0001A23FD5_12908/1-67 unclassified sequences 0.0 URS0001A24A59_12908/1-68 unclassified sequences 0.0 URS0001A2483A_12908/1-68 unclassified sequences 0.0 URS0001A24632_12908/1-67 unclassified sequences 0.0 URS0001A23208_1122191/1-64 Maribacter antarcticus DSM 21422 0.0 URS0001A2467E_12908/1-58 unclassified sequences 0.0 URS0001A2395F_12908/1-58 unclassified sequences 0.0 URS0001A232BE_12908/1-58 unclassified sequences 0.0 URS0001A23925_12908/1-59 unclassified sequences 0.0 URS0001A23C98_12908/1-69 unclassified sequences 0.0 URS0001A24915_12908/1-68 unclassified sequences 0.0 URS0001A247AE_12908/1-63 unclassified sequences 0.0 URS0001A236E3_12908/1-68 unclassified sequences 0.0 URS0001A237AC_12908/1-56 unclassified sequences 0.0 URS0001A24334_12908/1-56 unclassified sequences 0.0 URS0001A242B3_1349785/1-65 Tenacibaculum maritimum NCIMB 2154 0.0 URS0001A235D6_12908/1-58 unclassified sequences 0.0 URS0001A238A9_1298868/1-67 Flavobacterium sp. URHB0058 0.0 URS0001A23E64_1121888/1-67 Flavobacterium denitrificans DSM 15936 0.0 URS0001A2465F_980584/1-65 Flavobacteriaceae bacterium HQM9 0.0 URS0001A23BE5_221126/1-67 Algibacter lectus 0.0 URS0001A23A32_1121890/1-66 Flavobacterium frigidarium DSM 17623 0.0 URS0001A23A74_12908/1-67 unclassified sequences 0.0 URS0001A23F55_1603293/1-66 Flavobacterium sp. 316 0.0 URS0001A247AC_12908/1-67 unclassified sequences 0.0 URS0001A24896_12908/1-67 unclassified sequences 0.0 URS0001A245E4_1121896/1-67 Flavobacterium sasangense DSM 21067 0.0

UACCU.UUGCAACC.............GAAUUAGg..........AAAAC................cCCAAUUC.....................................AUAC.AUAAU.AAUCAUU...UA-AA..CAAUAUUAGCAUG UACUU.UUGCCGCU.............UGAUUAUc..........AAAGA................gGUAGUCA.....................................GUAC.AUAAA.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCCGUU.............CAAUUCUga.........AAA--...............ucAGGGUUA.....................................UUAC.AUAAA.AAUUAUU...AA-AA..UAAUAUUGGAAUG UAUAU.UUGCCGUU.............CAAUUCUga.........AAA--...............ucAGAGUUA.....................................UUAC.AUAAA.AAUUAUU...AA-AA..UAAUAUUGGAAUG UAUAU.UUGCCAAU.............CAAUUCUga.........AAA--...............ucAGAGUUA.....................................UUAC.AUAAA.AAUUAUU...AAUAA..UAAUAUUGGAAUG UAUAU.UUGCCACU.............CAAUUCUga.........AAA--...............ucAGAGUUA.....................................UUAC.AUAAA.AAUCAUU...AAAAA..UAAUAUUGGAAUG UAUAU.UUGCCACU.............CAAUUCUga.........AAA--...............ucAGAGUUA.....................................UUAC.AUAAA.AAUUAUU...AA-AA..UAAUAUUGGAAUG UAUAU.UUGCAGCC.............UGAUUGA...........AAA--.................UCAUUCA....................................gAUAC.AUAAA.AAUCAUU...AA-AC..GAAUAUUGGAAUG UAAAU.UUGCACCC.............GUUC---...........AAC--.................---GGAA.....................................CUAC.AUAAU.AAUCAUU...UACAA..CAAUAUUAGCAUG UAAAU.UUGCACCC.............GUUC---...........AAC--.................---GGAA.....................................CUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUAGCAUG UAAAU.UUGCACCC.............GUUC---...........AGA--.................---GGAA.....................................CUAC.AUAAU.AAUCAUU...UACAA..CAAUAUUGGCAUG UACAU.UUGCACCC.............GUUC---...........AAUG-.................---GAAC.....................................AUAC.AUAAU.AAUCAUU...UACAA..UAAUAUUAGCAUG UACCU.UUGCAACC.............GAAU-UAgga........AAA--..............uccUAAAUUC.....................................AUAC.AUAAA.AAUCAUU...UAAUA..UAAUAUUGGAAUG UACCU.UUGCAACC.............GAA-UUAgg.........AAACA...............ccU-AUUUC.....................................AUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGAAUG UAUCU.UUGCAGCU.............GUGUU--...........AAAAGa................--AACAC.....................................GUAC.AUAAA.AAUCAUU...AAAAA..CAAUAUUGGAAUG UAUAU.UUGCGCGU.............CUAUUAU...........AAA--.................AUAGUAG.................................aaauAUAC.AUAAU.AAUCAUU...UAAAA..UAAUAUUGGAAUG UAUAU.UUGCAUUCa............AU-----...........UUA--.................-----AU....................................cAUAC.AUAAA.AAUCAUU...ACAAA..UAAUAUUGGCAUG UAUAU.UUGCAGUCa............AU-----...........UUA--.................-----AU....................................cAUAC.AUAAA.AAUCAUU...AAAAA..UAAUAUUGGCAUG UAUAU.UUGCUGCU.............UUGAUGA...........AAAC-.................UCAUCAA....................................uAUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCACCC.............GUCUA--...........AAG--.................--UAGAC.....................................AUAC.AUAAG.AAUCAU-...UA-AA..UAAUAUUGGAAUG UAUUU.UUGCACCC.............GUCU-UAcaa........AAG--..............uugUAAAGAC.....................................AUAC.AUAAA.AAUCAU-...UA-AA..UAAUAUUGGAAUG UAAUU.UUGCACCC.............GUC-UUAcaa........AAG--..............uugUAUUGAC.....................................AUAC.AUAAA.AAUCAU-...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCACCC.............UUGAAAG...........AAAAC.................CUUUCAA.....................................AUAC.AUAAG.AAUCAUU...UA-AA..UAAUAUUGGAAUG UAUAU.UUGCACGC.............UUGAAAG...........AAAAA.................CUUUCAA....................................gCUAC.AUAAC.AAUCAUU...UACAA..UAAUAUUAGAAUG UACUU.UUGCACCG.............UCUAACA...........AUAGA.................UGCUAGA....................................cAUAC.AUAAA.AAUCAUU...AA-AC..AAAUAUUGGAAUG UAUAU.UUGCAGCC.............GAAUUG-...........CCACCaua..............-CAAUUC.....................................AUAC.AUAAA.AAUCAUU...AAAUA..UAAUAUUGGCAUG UAUAU.UUGCAGCC.............GAAUUG-...........CUACCaua..............-CAAUUC.....................................AUAC.AUAAU.AAUCAUU...UA-AA..UAAUAUUGGCAUG UAUCU.UUGCACCC.............GAAUUG-...........CAAUCaua..............-CAAUUC.....................................AUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUCU.UUGCACCC.............GAAUUG-...........CUACCaua..............-CAAUUC.....................................AUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG UAUCU.UUGCACCC.............GAAUUG-...........CAACCaua..............-CAAUUC.....................................AUAC.AUAAA.AAUCAUU...UAAAA..UAAUAUUGGCAUG