Rfam: Seed sequence alignment for RF03157

URS0001A23CE3_1214065/1-54 Enterobacteriaceae bacterium B14 0.0 URS0001A23FFF_343509/1-54 Sodalis glossinidius str. 'morsitans' 0.0 URS0001A24624_2342/1-56 primary endosymbiont of Sitophilus oryzae 0.0 URS0001A247DA_12908/1-54 unclassified sequences 0.0 URS0001A24AA5_1239307/1-54 Sodalis praecaptivus 0.0 URS0001A239E3_1339230/1-60 Plesiomonas sp. ZOR0011 0.0 URS0001A248A9_1331007/1-60 Agarivorans albus MKT 106 0.0 URS0001A23BFD_12908/1-53 unclassified sequences 0.0 URS0001A23BFD_1123055/1-53 Pararheinheimera texasensis DSM 17496 0.0 URS0001A247BA_12908/1-53 unclassified sequences 0.0 URS0001A237C0_1283284/1-51 Tolumonas lignilytica 0.0 URS0001A237C0_595494/1-51 Tolumonas auensis DSM 9187 0.0 URS0001A23787_1121018/1-51 Arsenophonus nasoniae DSM 15247 0.0 URS0001A23D70_1247024/1-51 Arsenophonus endosymbiont str. Hangzhou of Nilaparvata lugens 0.0 URS0001A2321E_1120963/1-51 Algicola sagamiensis DSM 14643 0.0 URS0001A2471A_1517416/1-49 Idiomarina atlantica 0.0 URS0001A23B71_1122124/1-49 Idiomarina sediminum DSM 21906 0.0 URS0001A23AB9_435908/1-49 Pseudidiomarina salinarum 0.0 URS0001A23C06_740709/1-53 Idiomarina sp. 10-D-4 0.0 URS0001A23E11_12908/1-52 unclassified sequences 0.0 URS0001A23F32_1279015/1-52 Oceanimonas smirnovii ATCC BAA-899 0.0 URS0001A23F32_511062/1-52 Oceanimonas sp. GK1 0.0 URS0001A23D79_12908/1-55 unclassified sequences 0.0 URS0001A24065_69222/1-60 Erwinia mallotivora 0.0 URS0001A24A73_65700/1-60 Erwinia tracheiphila 0.0 URS0001A237AA_1267600/1-61 Pantoea sp. IMH 0.0 URS0001A240F2_1560201/1-61 Erwinia iniecta 0.0 URS0001A249CB_12908/1-61 unclassified sequences 0.0 URS0001A249CB_1274722/1-61 Erwinia toletana DAPP-PG 735 0.0 URS0001A247A1_1500895/1-60 Erwinia sp. 9145 0.0

CGCGUGGUGUGCGG-C...................GAAAAau............................G.ACCGU.AUAGCGACGCGGCCUUAACUA....GAGGU CGCGUGGUGUCUGG-C......ua...........AAG--........................ua....G.ACUGG.AUAGCGACGCGGCCUUAUGAA....GAGGU CGCGUGGUGUCUGGUU...................AUAAAgua...........................G.ACCGG.AUAGCGACGCGGCCUUACGAA....GAGGU CGCGUGGUGUCCGG-C...................GUAAGca............................G.ACCGG.AUAGCGACGCGGCCUUACGAU....GAGGU CGCGUGGUGUCUGG-C...................UAAAGua............................G.ACCGG.AUAGCGACGCGGCCUUACGAA....GAGGU CGUGUGGUGUUUGG-C......uggc.........AGUA-......................gcuga...G.ACCAA.AUAGCGACACGGCCUUUACUU....GAGGU CGUAUGGUGUUUGGU-......guca.........AUUG-......................uggc....G.ACCAG.AUGGCGAUACGGCCCAAGUAUu...GAGGU CGUAUGGUGUCUGA-C......ag...........UAAG-........................cu....G.AUCAG.AUAGCGAUACGGCCCUAAC--....GAGGU CGUAUGGUGUCUGA-C......ag...........UAAG-........................cu....G.AUCAG.AUAGCGAUACGGCCCUAAC--....GAGGU CGUAUGGUGUUUGA-C......ag...........CAAGA........................cu....G.AUCAG.AUUGCGAUACGGCCCAAC---....GAGGU CGUGUGGUGUCUGG-C...................UUCG-..............................G.GUCAG.AUGGCGACACGGCCUGAAUCA....GAGGU CGUGUGGUGUCUGGCU...................UCG--..............................G.GUCAG.AUGGCGACACGGCCUGAAUCA....GAGGU CGUAUGGUGUCUAG-C...................GUUAGg.............................G.-UUAG.AUAGCGAUGCGGCCUAACUA-....GAGGU CGUAUGGUGUCUAG-C...................GUUAGg.............................G.-UUAG.AUAGCGAUGCGGCCUAAGUA-....GAGGU CGUAUGGUGUUCGG-C...................UUAG-..............................G.AUCGA.AUAGCGAUACGGCCUGAAAAA....GAGGU CGUAUGGUGUCCGG-C...................AACA-..............................Ga-UCGG.AUGGCGAUGCGGCCUAACU--....GAGGU CGUAUGGUGUCCGG-C...................ACAG-..............................G.AUCGG.AUGGCGAUGCGGCCCAAUU--....GAGGU CGUGUGGUAUUCGG-C...................AUAA-..............................G.AUCGG.AUGGCGAUGCGGCCCAAUU--....GAGGU CGUAUGGUGUCUGG-C......gu...........UCA--........................gc....G.ACCAG.AUAGCGAUGCGGCCUAACUU-....GAGGU CGUGUGGUGUCUGGCU...................CUG--..............................G.AUCAG.AUAGCGACACGGCCUACAGAUa...GAGGU CGUGUGGUGUCUGG-C...................UCAG-..............................G.AUCAG.AUAGCGACACGGCCUACUGACa...GAGGU CGUGUGGUGUCUGG-C...................UCAG-..............................G.AUCAG.AUAGCGACACGGCCUACUGACa...GAGGU CGUGUGGUGUCUGGAC...................UACAG..............................G.AUCAG.AUAGCGACACGGCCUACUGACua..GAGGU CGUGUGGUA-CCUGUG......c.agga.......GUG--....................accugg....C.ACGGG.AGAGCGACACGGCCUUCACU-....GAGGU CGUGUGGUG-CCUGUG......c.aggu.......UUU--....................uccugg....C.AUGGG.AGAGCGACACGGCCUUAACU-....GAGGU CGUGUGGUG-CCGGUG......c.aggg.......UCAA-....................cccugg....C.ACGGG.AGAGCGACACGGCCUUAACU-....GAGGU CGUGUGGUG-CCGGUG......c.agga.......AAUU-....................uccugg....C.ACGGG.AGAGCGACGCGGCCUUAACU-....GAGGU CGUGUGGUG-CCGGUG......c.agga.......AUUU-....................uccugg....C.ACGGG.AGAGCGACGCGGCCUUAACU-....GAGGU CGUGUGGUG-CCGGUG......c.agga.......AUUU-....................uccugg....C.ACGGG.AGAGCGACGCGGCCUUAACU-....GAGGU CGUGUGGUG-CCGGUG......c.aggc.......GUU--....................uccugg....C.ACGGG.AGAGCGACACGGCCUUAACU-....GAGGU