Rfam: Seed sequence alignment for RF03157

URS0001A23728_485447/1-50 Thalassomonas actiniarum 0.0 URS0001A23676_12908/1-59 unclassified sequences 0.0 URS0001A23FAE_12908/1-59 unclassified sequences 0.0 URS0001A24275_12908/1-59 unclassified sequences 0.0 URS0001A2405F_12908/1-49 unclassified sequences 0.0 URS0001A23C00_12908/1-57 unclassified sequences 0.0 URS0001A246AE_12908/1-57 unclassified sequences 0.0 URS0001A23C8E_12908/1-51 unclassified sequences 0.0 URS0001A246C7_1188252/1-82 Vibrio rumoiensis 1S-45 0.0 URS0001A23EB3_12908/1-50 unclassified sequences 0.0 URS0001A23F6B_12908/1-49 unclassified sequences 0.0 URS0001A24364_1120969/1-59 Aliagarivorans marinus DSM 23064 0.0 URS0001A23DE6_1120970/1-59 Aliagarivorans taiwanensis DSM 22990 0.0 URS0001A24713_12908/1-62 unclassified sequences 0.0 URS0001A23ED8_12908/1-60 unclassified sequences 0.0 URS0001A2477B_592316/1-58 Pantoea sp. At-9b 0.0 URS0001A23C3E_1681195/1-58 Pantoea sp. RIT-PI-b 0.0 URS0001A242E5_1144341/1-58 Pantoea sp. YR343 0.0 URS0001A237CE_12908/1-59 unclassified sequences 0.0 URS0001A2485A_660596/1-59 Pantoea stewartii subsp. stewartii DC283 0.0 URS0001A23CDE_66270/1-59 Pantoea stewartii subsp. indologenes 0.0 URS0001A23CDE_66269/1-59 Pantoea stewartii 0.0 URS0001A239EC_1522060/1-59 Pantoea sp. 3.5.1 0.0 URS0001A2428F_470934/1-59 Pantoea vagans 0.0 URS0001A24015_12908/1-59 unclassified sequences 0.0 URS0001A24015_470931/1-59 Pantoea anthophila 0.0 URS0001A2432A_1484158/1-57 Pantoea sp. PSNIH1 0.0 URS0001A2432A_12908/1-57 unclassified sequences 0.0 URS0001A241CA_470934/1-60 Pantoea vagans 0.0 URS0001A23945_472695/1-60 Pantoea septica 0.0

CGUAUGGUACCUGG-C...................AAAA-..............................G.AUCAG.GUGGCGAUACGGCCUUAACA-....GAGGU CGUAUGGUGCUUGG-C......ag...........CAAUAauga....................cu....G.AUCAA.GUGGCGAUGCGGCCUUAACA-....GAGGU CGUAUGGUGCUUGG-C......ag...........CAAUAauga....................cu....G.AUCAA.GUGGCGAUACGGCCUUAACA-....GAGGU CGUAUGGUGCUUGA-C......ag...........CAAUAauga....................cu....G.AUCAA.GUGGCGAUACGGCCUUAACA-....GAGGU CGUGUGGUGUCUGUU-...................GAAACa.............................-.CAUAG.AUAGCGACACGGCCGACA---....GAGGU CACAUGGUGUCCUG-C......gc...........AGACGag......................gc....G.ACUGG.AUAGCGAUGUGGCCUAACUC-....GAGGU CACAUGGUGUCCUG-C......gc...........AAAAGag......................gc....G.ACUGG.AUAGCGAUGUGGCCCAACUU-....GAGGU CGCAUGGUGUUCGGCU...................UUG--..............................G.AUCGA.AUGGCGAUGCGGCCCAUAACU....GAGGU CGUAUGGUGUCUGGCC.....acuuuuu.aucuucUUGUA............gaaguauaaagaggaa..GaACUAG.AUAGCGAUACGGACCAAUAU-....AAGGU CGUGUGGUGUCCGACU...................UCG--..............................G.GUUUG.AUAGCGACACGGCCUAAAUU-....GAGGU CGUAUGGUGUGCGGA-...................GAGAG..............................-.UCCGU.AUAGCGAUGCGGCCCAAUU--....GAGGU CGUGUGGUGUUUGGU-......gcug.........GUAA-......................cggug...-.AUCAA.AUGGCGACACGGCCCAUGAUU....GAGGU CGUGUGGUGUUUGGU-......gcug.........GUUA-......................cagug...-.AUCAA.AUGGCGACACGGCCCAUGAUU....GAGGU CGUGUGGUGCCGGUGC......agg..........UGAAUu......................ccug...G.CACGGgAGAGCGACGCGGCCCUUUACU....GAGGU CGUGUGGUG-CUGCGC......agg..........UUCACgu.....................ccug...G.CGCGG.AGAGCGACACGGCCUUAUAU-....GAGGU CGUGUGGUG-CUGUGC......agg..........UUUGG.......................ccug...G.CACGG.AGAGCGACACGGCCUUUUAU-....GAGGU CGUGUGGUG-CUGUGC......aggc.........UGA--......................gccug...G.CACGG.AGAGCGACACGGCCUUUUAU-....GAGGU CGUGUGGUG-CUGUGC......aggc.........UAA--......................gccu....GgCACGG.AGAGCGACACGGCCUUUUAU-....GAGGU CGUGUGGUG-CUGUGC......aggu.........CAAA-......................gccug...G.CACGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGCGC......agg..........UUUCGu......................ccua...G.CGCGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGCGC......agg..........UUUCGu......................ccug...G.CGCGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGCGC......agg..........UUUCGu......................ccug...G.CGCGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGUGC......ggg..........UUACGa......................ccug...G.CACGG.AGAGCGACACGGCCUUAUCU-....GAGGU CGUGUGGUG-CUGUGC......aggu.........UAAC-......................gccug...G.CACGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGUGC......aggu.........UUAC-......................gccug...G.CACGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGUGC......aggu.........UUAC-......................gccug...G.CACGG.AGAGCGACACGGCCUUCUAU-....GAGGU CGUGUGGUG-CUGUGC......agg..........UUCG-.......................ccug...G.CAUGG.AGAGCGACACGGCCUUUUAU-....GAGGU CGUGUGGUG-CUGUGC......agg..........UUCG-.......................ccug...G.CAUGG.AGAGCGACACGGCCUUUUAU-....GAGGU CGUGUGGUG-CUGUGC......gggu.........UUUUA......................gccug...G.CACGG.AGAGCGACACGGCCUUUUAU-....GAGGU CGUGUGGUG-CUGUGC......aggu.........UUUUA......................gccug...G.CACGG.AGAGCGACACGGCCUUUUAU-....GAGGU