Rfam: Seed sequence alignment for RF03157

URS0001A23AEA_314282/1-64 Psychromonas sp. CNPT3 0.0 URS0001A24870_1265507/1-53 Succinimonas amylolytica DSM 2873 0.0 URS0001A2390D_12908/1-53 unclassified sequences 0.0 URS0001A233BB_1336237/1-61 Phaseolibacter flectens ATCC 12775 0.0 URS0001A23BCE_527012/1-55 Yersinia kristensenii ATCC 33638 0.0 URS0001A23947_61647/1-52 Enterobacter gergoviae 0.0 URS0001A24354_1280002/1-51 Vibrio jasicida 090810c 0.0 URS0001A23C81_1284797/1-52 Klebsiella pneumoniae DMC0799 0.0 URS0001A2362D_521004/1-51 Haemophilus influenzae 6P18H1 0.0 URS0001A247EC_1593232/1-52 Enterobacteriaceae bacterium ATCC 29904 0.0 URS0001A24816_367190/1-54 Yersinia similis 0.0 URS0001A2331B_727/1-51 Haemophilus influenzae 0.0 URS0001A23C81_883123/1-52 Klebsiella oxytoca 10-5248 0.0 URS0001A2362D_656913/1-51 Haemophilus influenzae NT127 0.0 URS0001A24766_1348336/1-53 Serratia marcescens LCT-SM166 0.0 URS0001A24625_527005/1-54 Yersinia ruckeri ATCC 29473 0.0 URS0001A232F6_1238446/1-50 Vibrio nigripulchritudo SFn27 0.0 URS0001A23A71_349965/1-55 Yersinia intermedia ATCC 29909 0.0 URS0001A2387D_262727/1-51 Haemophilus influenzae R2846 0.0 URS0001A23CF2_374928/1-51 Haemophilus influenzae PittAA 0.0 URS0001A2490E_748003/1-52 Vibrio vulnificus VVyb1(BT3) 0.0 URS0001A23452_1341643/1-54 Yersinia wautersii 0.0 URS0001A2328C_1224151/1-54 Dickeya solani MK10 0.0 URS0001A23452_633/1-54 Yersinia pseudotuberculosis 0.0 URS0001A24346_624/1-52 Shigella sonnei 0.0 URS0001A23A71_263819/1-55 Yersinia aleksiciae 0.0 URS0001A23A8C_38313/1-52 Shewanella algae 0.0 URS0001A23C81_1431455/1-52 Klebsiella pneumoniae NB60 0.0 URS0001A2490E_1219061/1-52 Vibrio vulnificus NBRC 15645 = ATCC 27562 0.0 URS0001A23A71_527004/1-55 Yersinia rohdei ATCC 43380 0.0

CGUGUGGUAUUUUGUU......gagaga.......AAUGCu...................ucuuuca...A.GCAAG.AUGGCGACACGGCCUAAC---....GAGGU UGUGUGGUGUCAGGC-......gc...........GAAA-........................gug...-.GUCUG.AUGGCGACACAGCCUGAAU--....GAGGU CGUAUGGUGUUUAAGC......u............UUAG-.........................a....G.CUUAA.AUGGCGAUACGGCCGAAAUA-....AAGGU CGUGUGGUG-CCGUGC......ggau.........CCUGU......................aucug...G.UGCGG.AGAGCGACGCGGACUUCUAUC....GAGGU CGUGUGGUGUCUGG-C...................GGAGUagg...........................G.-CUGG.AUAGCGACACGGCCUAAAUAUa...GAGGU CGCGUGGUG-UCUGGC...................GUCAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAUU-....GAGGU CGUGUGGUGUGCGG-C...................UUA--..............................GaCUCGU.AUAGCGACACGGCCUACUAUU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAACU-....GAGGU CACGCGGUGUGGGGA-...................GAAAG..............................-.UUCCU.AUAGCGGCGUGGCUUCAUUUU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUUACU-....GAGGU CGUGUGGUGUCUAG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUAAUAUA....GAGGU CACGCGGUGUGGGAA-...................GAAAG..............................-.UUCUU.AUAGCGGCGUGGCUUCAUUUU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAACU-....GAGGU CACGCGGUGUGGGGA-...................GAAAG..............................-.UUCCU.AUAGCGGCGUGGCUUCAUUUU....GAGGU CGUGUGGUGUCUGG-C...................GAAACagg...........................G.-CUGG.AUAGCGACACGGCCUUAACU-....GAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUUAAUUA....GAGGU CGUGUGGUGUCCGG-C...................AUA--..............................GaAUCGG.AUAGCGACACGGCCCAAUUU-....GAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUAAAUAUa...GAGGU CACGCGGUGUCAG---......uc...........CUU--........................ga....-.ACUUG.AUAGCGGCGUGGCUUCAAAUC....GAGGU CACGCGGUGUAGGGA-...................GAAAG..............................-.UUCCU.AUAGCGGCGUGGCUUCAUUUU....GAGGU CGUGUGGUGUGCGG-C...................AAA--..............................GaCUCGU.AUAGCGACACGGCCUACUAUUu...GAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUAAUAUA....GAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CCGG.AUAGCGACACGGCCUUAAACA....GAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUAAUAUA....GAGGU CGCGUGGUG-UCCAGC...................GUUAGg.............................G.CUGGA.AGGGCGACGCGGCCUAUUUU-....AAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUAAAUAUa...GAGGU CAUGUGGUG-UCCGAC...................UUCGG..............................G.UUGGA.AGAGCGACAUGGCCUUAACUU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAACU-....GAGGU CGUGUGGUGUGCGG-C...................AAA--..............................GaCUCGU.AUAGCGACACGGCCUACUAUUu...GAGGU CGUGUGGUGUCUGG-C...................GGAACagg...........................G.-CUGG.AUAGCGACACGGCCUAAAUAUa...GAGGU