Rfam: Seed sequence alignment for RF03157

URS0001A23D24_342610/1-51 Pseudoalteromonas atlantica T6c 0.0 URS0001A233EC_12908/1-51 unclassified sequences 0.0 URS0001A23672_1538096/1-51 Alteromonas sp. LTR 0.0 URS0001A2448B_12908/1-51 unclassified sequences 0.0 URS0001A244CA_12908/1-51 unclassified sequences 0.0 URS0001A244CA_1123236/1-51 Salinimonas chungwhensis DSM 16280 0.0 URS0001A23DF0_12908/1-52 unclassified sequences 0.0 URS0001A23E3B_12908/1-52 unclassified sequences 0.0 URS0001A23675_1298865/1-53 Alteromonas sp. ALT199 0.0 URS0001A23675_12908/1-53 unclassified sequences 0.0 URS0001A23675_203795/1-53 Alteromonas marina 0.0 URS0001A24B22_12908/1-52 unclassified sequences 0.0 URS0001A24A83_12908/1-53 unclassified sequences 0.0 URS0001A23675_1004785/1-53 Alteromonas macleodii str. 'Black Sea 11' 0.0 URS0001A23B97_12908/1-53 unclassified sequences 0.0 URS0001A242AB_12908/1-52 unclassified sequences 0.0 URS0001A24AEE_1278302/1-64 Psychromonas hadalis ATCC BAA-638 0.0 URS0001A24943_12908/1-65 unclassified sequences 0.0 URS0001A24AAB_12908/1-65 unclassified sequences 0.0 URS0001A24639_12908/1-65 unclassified sequences 0.0 URS0001A23741_12908/1-65 unclassified sequences 0.0 URS0001A24776_357804/1-65 Psychromonas ingrahamii 37 0.0 URS0001A233AD_12908/1-65 unclassified sequences 0.0 URS0001A249F8_12908/1-65 unclassified sequences 0.0 URS0001A248B0_1123036/1-65 Psychromonas arctica DSM 14288 0.0 URS0001A2330D_1278312/1-65 Psychromonas aquimarina ATCC BAA-1526 0.0 URS0001A23B0F_1278307/1-65 Psychromonas ossibalaenae ATCC BAA-1528 0.0 URS0001A2460B_1365007/1-66 Psychromonas sp. SP041 0.0 URS0001A2348A_12908/1-66 unclassified sequences 0.0 URS0001A24209_12908/1-65 unclassified sequences 0.0

CGUAUGGUGUUCAACU...................UCG--..............................G.GUUGG.AUAGCGAUACGGCCUUACUUA....GGGGU CGUAUGGUGUUUGGCU...................UCG--..............................G.GCGAA.AUAGCGAUACGGCCUUAUUGU....GAGGU CGUAUGGUGUUUGGCU...................UCG--..............................G.GCUGA.AUAGCGAUACGGCCUUAUUGU....GAGGU CGUAUGGUGUUCAGCU...................UCG--..............................G.GCUGG.AUAGCGAUACGGCCUUUUUGU....GAGGU CGUAUGGUGUUCAGCU...................UCG--..............................G.GCUGG.AUAGCGAUACGGCCUUUUUUU....GAGGU CGUAUGGUGUUCAGCU...................UCG--..............................G.GCUGG.AUAGCGAUACGGCCUUUUUUU....GAGGU CGUAUGGUGUUCAGCU...................UCG--..............................G.GCUGG.AUGGCGAUACGGCCUUUUUUAu...GAGGU CGUAUGGUGUUCAGCU...................UCG--..............................G.GCUGG.AUAGCGAUACGGCCUUAAGAUu...GAGGU CGUAUGGUGUGCGA-C...................UUCGG..............................G.-UUGU.AUAGCGAUACGGCCUUAUUAUgu..GAGGU CGUAUGGUGUGCGA-C...................UUCGG..............................G.-UUGU.AUAGCGAUACGGCCUUAUUAUgu..GAGGU CGUAUGGUGUGCGA-C...................UUCGG..............................G.-UUGU.AUAGCGAUACGGCCUUAUUAUgu..GAGGU CGUAUGGUGUGCGGCU...................UCG--..............................G.GCUGU.AUAGCGAUACGGCCUUAUUAAu...GAGGU CGUAUGGUGUGCAACU...................UCG--..............................G.GUUGU.AUAGCGAUACGGCCUUAUAAUgu..GAGGU CGUAUGGUGUGCGACU...................UCG--..............................G.GUUGU.AUAGCGAUACGGCCUUAUUAUgu..GAGGU CGUAUGGUGUGCGACU...................UCG--..............................G.GUCGU.AUAGCGAUACGGCCUUAUUAUuu..GAGGU CGUAUGGUGUGCAACU...................UCG--..............................G.GUUGU.AUAGCGAUACGGCCUUUUACGu...GAGGU CGUGUGGUACUCUGUU......gauuga.......AAUAA....................uucauca...A.GCUGA.GCAGCGACACGGACCAAUA--....GAGGU CGUGUGGUACUUUGUU......gaguga.......AAUGAu...................ucucuca...A.ACAAA.GCAGCGAUGCGGCCCAAUA--....GAGGU CGUAUGGUACUUUGUU......ggauga.......AAUGAu...................ucauuc....AuGCAGA.GCAGCGAUGCGGCCCAAUA--....GAGGU CGUAUGGUACUUUGUU......gaauga.......AAUGAu...................ucauuca...A.GCAGA.GCAGCGAUGCGGCCCAAUA--....GAGGU CGUAUGGUACUUUGUU......ggauga.......AAUGAu...................ucauuca...A.GCAGA.GCAGCGAUGCGGCCCAAUA--....GAGGU CGUAUGGUACUUUGUU......gaauga.......AAUGAu...................ucauuca...A.GCAGA.GCAGCGAUACGGCCCAAUA--....GAGGU CGUGUGGUACUUUGUU......ggauga.......AAUGAu...................ucauuca...A.ACAGA.GCAGCGAUGCGGCCCAAUA--....GAGGU CGUGUGGUACUUUGUU......gaguaa.......AAUAAu...................uuauuca...A.ACAGA.GCAGCGACACGGACCAAUA--....GAGGU CGUGUGGUACUUUGUU......gaguga.......AAUAAu...................ucauuca...A.GCUGA.GCAGCGAUACGGCCUAAAA--....GAGGU CGUGUGGUACUUUGUU......gaguga.......AAUAAu...................ucauuca...A.ACAGA.GCAGCGACACGGCCCAAUA--....GAGGU CGUGUGGUACUUUGUU......gaguga.......AAUAAu...................ucauuca...A.ACUGA.GCAGCGACACGGCCCAAUA--....GAGGU CGUGUGGUACUUUGUU......gaauga.......AAUAAu...................ucauuc....AaGCUGA.GCAGCGACACGGCCUAAAUA-....GAGGU CGUGUGGUACUUUGUU......ggauga.......AAUAAu...................ucauuca...A.GCUGA.GCAGCGACACGGCCUAAAUA-....GAGGU CGUGUGGUACUUUGUU......ggauga.......AAUAAu...................ucauuc....AuGCUGA.GCAGCGACACGGCCCAAUA--....GAGGU