Seed sequence alignment for RF01695

---AAUG.GUG.GC.UC..AGGC..GG.GGCAGCC.UAAG..GGCUG.GCCGGG...UUCCGAUACG..........ACCGGUAgUCUC.A.ACCCC..GUC...U....GG..GC.U.GC.CACCAAU AAUUAUG.GUG.GC.UC..AGGC..AG.GGCAGCU.UUCG..GGCUG.GCCGGU...AGCUGAUUGG..........GCCGGUAuUCCU.A.CCCUU..GUC...U....GG..GU.C.AC.CACCAAC UUCUAGG.GCG.GG.CU..AUA-..UGuGGGAGC-.UUCG..-GCUC.GCUGG-...UUCCGGUGA-..........-CCAGCC.UACC.A.ACCCA..-UA...U....AG.uCC.C.GC.CCUUUUU CUUUAUG.GGC.GG.GC..CGUG..CG.GGGCAUC.UUCG..GAUGC.GCCGG-...--CCCUCAG-..........ACCGGUA.CGCC.A.ACCCG..UGC...G....GU..CU.G.CU.CACCCAA UGUUAUG.GCA.GU.GU..GCGU..GG.GAGAACC.GCAA..GGUUC.GCCGU-...UUCUUUCGU-..........AGCGGUAgUCUC.A.AUCCU..GCG...U....AC..AC.U.GU.CGCCCUC CUCAAUG.GUG.GG.CU..GGAU..GG.GGGAGCC.GAAA..GGCUC.GCCGG-...--AAGGUGAA..........CCCGGUAaGACC.A.ACUCC..GUU...C....AG..UU.C.GC.CACCC-- UGUAAUG.GUG.GC.UC..AGGC..GG.GGCUGAC.UUCG..GUCAG.GCCGGU...AUCCGUUAGA..........GCCGGUAuUUCC.A.CCCCC..GUC...U....GG..GC.U.AC.CACCAGU AAUUAUG.GUG.GG.GC..GUGC..AG.GGGCAUC.GAAA..GAUGC.GCCGGG...GUCAUGUGCG..........ACCGGUUaCGCC.A.ACCCU..GUA...C....GU..CU.C.AC.CACCUCU GUUUUUG.GCG.GC.UC..GAA-..UG.GGAGAGC.GCAA..GCUCU.GCCGGU...UUCCGCAAGGau......guCCCGGUU.CGUC.A.ACCCG..-UU...C....GA..GC.U.GC.CGCCC--

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