Rfam: Seed sequence alignment for RF00641

URS000075AF10_9913/1-69 Bos taurus (cattle) 0.0 URS000075AF10_9615/1-69 Canis lupus familiaris (dog) 0.0 URS000075AF10_9796/1-69 Equus caballus (horse) 0.0 URS000075AF10_9600/1-69 Pongo pygmaeus (Bornean orangutan) 0.0 URS00007E461C_9925/36-117 Capra hircus (goat) 0.0 URS000075CB21_9940/35-116 Ovis aries (sheep) 0.0 URS000075D222_10029/1-77 Cricetulus griseus (Chinese hamster) 0.0 URS0000759CA5_9606/1-78 Homo sapiens (human) 0.0 URS00007E3CF1_246437/1-60 Tupaia chinensis (Chinese tree shrew) 0.0 URS0000759CA5_9544/1-78 Macaca mulatta (Rhesus monkey) 0.0 URS0000759CA5_9600/1-78 Pongo pygmaeus (Bornean orangutan) 0.0 URS000075DE39_9598/1-77 Pan troglodytes (chimpanzee) 0.0 URS000075D463_10090/1-74 Mus musculus (house mouse) 0.0 URS000075C6C9_10116/1-76 Rattus norvegicus (Norway rat) 0.0 URS000075EC5C_9913/1-78 Bos taurus (cattle) 0.0 URS00000162F8_9940/13-94 Ovis aries (sheep) 0.0 URS000075A5EC_9796/1-78 Equus caballus (horse) 0.0 URS00007E497F_9615/1-76 Canis lupus familiaris (dog) 0.0 URS000075EC08_9598/21-102 Pan troglodytes (chimpanzee) 0.0 URS000075E2E8_9593/21-102 Gorilla gorilla (western gorilla) 0.0 URS0000A83F82_9600/11-92 Pongo pygmaeus (Bornean orangutan) 0.0 URS000075B3AB_9606/11-92 Homo sapiens (human) 0.0 URS000075C64A_9796/11-92 Equus caballus (horse) 0.0 URS000075DF0E_9940/11-92 Ovis aries (sheep) 0.0 URS00007E33AD_9925/21-102 Capra hircus (goat) 0.0 URS000075B695_9913/11-92 Bos taurus (cattle) 0.0 URS00007E3934_9615/1-57 Canis lupus familiaris (dog) 0.0 URS0000184BBC_9940/30-111 Ovis aries (sheep) 0.0 URS0000184BBC_9925/30-111 Capra hircus (goat) 0.0 URS0000AB0843_9823/1-77 Sus scrofa (pig) 0.0

------TTGAGC.AGAGGTTGCCCTTGGTGAATTCGCTTT.ATTTATG.TTGAATCACACAAAGGCAA-CTTTTgTTTG------- ------TTGAGC.AGAGGTTGCCCTTGGTGAATTCGCTTT.ATTTATG.TTGAATCACACAAAGGCAA-CTTTTgTTTG------- ------TTGAGC.AGAGGTTGCCCTTGGTGAATTCGCTTT.ATTTATG.TTGAATCACACAAAGGCAA-CTTTTgTTTG------- ------TTGAGC.AGAGGTTGCCCTTGGTGAATTCGCTTT.ATTTATG.TTGAATCACACAAAGGCAA-CTTTTgTTTG------- TGATCCTTGAGC.AGAGGTTGCCCTTGGTGAATTCGCTTT.ATTTATG.TTGAATCACACAAAGGCAA-CTTTTgTTTGAGTATCA TGATCCTTGAGC.AGAGGTTGCCTTTGGTGAATTCGCTTT.ATTTATG.TTGAATCACACAAAGGCAA-CTTTCgTTTGAGTATCA ---TTCTGGAGC.AGAGGTTGCCCTTGGTGAATTCGCTTT.ATTGATG.TTGAATCACACAAAGGCAA-CTTTTgTTTGAGTAT-- --ATACTTGAGG.AGAAATTATCCTTGGTGTGTTCGCTTT.ATTTATG.ATGAATCATACAAGGACAATTTCTT.TTTGAGTAT-- ------------.AGAGATTGTCCTCGGTGTGTTCGCTTT.ATTTATG.ATGAATCATACAAGGACAATTTCTT.T---------- --ATACTTGAGG.AGAAATTATCCTTGGTGTGTTCGCTTT.ATTTATG.ATGAATCATACAAGGACAATTTCTT.TTTGAGTAT-- --ATACTTGAGG.AGAAATTATCCTTGGTGTGTTCGCTTT.ATTTATG.ATGAATCATACAAGGACAATTTCTT.TTTGAGTAT-- ---TACTTGAGG.AGAAATTATCCTTGGTGTGTTCGCTTT.ATTTATG.ATGAATCATACAAGGACAATTTCTT.TTTGAGTAT-- ---TACTTGAGG.AGAAATTATCCTTGGTGTGTTGGCTCT.TTT--GG.ATGAATCATACAAGGATAATTTCTT.TTTGAGTA--- --ATACTTGAGG.AGAAATTATCCTTGGTGTGTTTGCTCT.TTT--GG.ATGAATCATACAAGGGTAATTTCTT.TTCGAGTAT-- --ATACTTGAGG.AGAAATTATCCTTGGTGTGTTCGCTTT.ATTTGGG.ATGAATCATACAAGGACAATTTCTT.TCTGAGTAT-- TCATACTTGAGG.AGAAATTATCCTTGGTGTGTTCACTTT.ATTTGGG.ATGAATCATACAAGGACAATTTCTT.TTTGAGTATCA --ATACTTGAGG.AGAAATTATCCTTGCTGTGTTCGCTTT.ATTTGTG.ATGAATCATACAAGGACAATTTCTT.TTTGAGTAT-- ---TACTTGAGG.AGAAATTATCCTTGGTGTGTTCGCTGT.GTTTGTG.AGGAATCATACAAGGACAATTTCTT.TTTGAGTA--- GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTC.ATTCATC.ATGAATAATACATGGTTAACCTCTT.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTC.ATTCATC.ATGAATAATACATGGTTAACCTCTT.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTC.ATTCATC.ATGAATAATACATGGTTAACCTCTT.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTC.ATTCATC.ATGAATAATACATGGTTAACCTCTT.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTC.ATTCATC.ATGAATAATACATGGTTAACCTCTT.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTG.GCTCATC.ATGAATAATACATGGTTAACCTCTC.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTG.GCTCATC.ATGAATAATACATGGTTAACCTCTC.TTTGAATATCA GGATATTTGAGG.AGAGGTTATCCGTGTTATGTTCGCTTG.GCTCATC.ATGAATAATACATGGTTAACCTCTC.TTTGAATATCA ------------.--AAGTTGTTCGTGGTGGATTCGCTTT.ACTTATG.ACGAATCATTCACGGACAACACTTT.----------- TGGTACTTGAAG.AGAAGTTGTTCGTGGTGGATTCGCTTT.ACTTATG.ACGAATCATTCACGGACAACACTTT.TTTCAGTACCA TGGTACTTGAAG.AGAAGTTGTTCGTGGTGGATTCGCTTT.ACTTATG.ACGAATCATTCACGGACAACACTTT.TTTCAGTACCA ----ACTTGAAG.AGAAGTTGTTCGTGGTGGATTCGCTTT.ACTTATG.ACGAATCATTCACGGACAACACTTT.TTTCAGTACC-