Rfam: Seed sequence alignment for RF00641

URS0000120037_9940/11-92 Ovis aries (sheep) 0.0 URS00007E47A8_9925/11-92 Capra hircus (goat) 0.0 URS000075AA3A_9796/1-64 Equus caballus (horse) 0.0 URS000075ACD4_9913/1-75 Bos taurus (cattle) 0.0 URS0000634C7D_9544/1-81 Macaca mulatta (Rhesus monkey) 0.0 URS00006A5ABA_9606/1-81 Homo sapiens (human) 0.0 URS00006A5ABA_9796/1-81 Equus caballus (horse) 0.0 URS000075C08A_9598/1-80 Pan troglodytes (chimpanzee) 0.0 URS000075BC7F_9593/23-105 Gorilla gorilla (western gorilla) 0.0 URS0000D4F76A_9823/1-75 Sus scrofa (pig) 0.0 URS00006A5ABA_9615/1-81 Canis lupus familiaris (dog) 0.0 URS00006A5ABA_9600/1-81 Pongo pygmaeus (Bornean orangutan) 0.0 URS000075B0BC_10090/2-84 Mus musculus (house mouse) 0.0 URS000075E0E9_10116/1-83 Rattus norvegicus (Norway rat) 0.0 URS000075EAEF_9940/6-88 Ovis aries (sheep) 0.0 URS00007E37A4_9925/22-104 Capra hircus (goat) 0.0 URS000075C4C9_9913/2-84 Bos taurus (cattle) 0.0 URS000071A79E_10090/1-79 Mus musculus (house mouse) 0.0 URS000071A79E_10116/1-79 Rattus norvegicus (Norway rat) 0.0 URS0000759952_10029/8-88 Cricetulus griseus (Chinese hamster) 0.0 URS0000676CBC_9615/1-78 Canis lupus familiaris (dog) 0.0 URS000075C7EC_9598/1-80 Pan troglodytes (chimpanzee) 0.0 URS0000A84CFE_9600/1-81 Pongo pygmaeus (Bornean orangutan) 0.0 URS000075D97A_9606/1-81 Homo sapiens (human) 0.0 URS000075B13E_10116/1-61 Rattus norvegicus (Norway rat) 0.0 URS000075AF38_9598/1-74 Pan troglodytes (chimpanzee) 0.0 URS000075A1A8_9606/1-75 Homo sapiens (human) 0.0 URS000075A1A8_10090/1-75 Mus musculus (house mouse) 0.0 URS000075A1A8_9544/1-75 Macaca mulatta (Rhesus monkey) 0.0 URS000075A1A8_9600/1-75 Pongo pygmaeus (Bornean orangutan) 0.0

CGGAACTTGAAG.ATAGGTTATCCGTGTAGCCTTCGCTTT.ACTTGTG.ACGAATCATACACGGTTCACCTATT.TTTTAGTACCA CGGGACTTGAAG.ATAGGTTATCCGTGTAGCCTTCGCTTT.ACTTGTG.ACGAATCATACACGGTTCACCTACT.TTTCAGTACCA ----------AG.ATAGGTTATCCGTGTTGCCTTCGCTTT.ATCTGTG.ACGAATCATACACGGTTCACCTATT.TTT-------- -----TTCGAAA.GGAGGTTGTCCGTGATGTATTTGCTTT.ATTTGTG.GCAGATATTGCACGGTTGATCTCTT.-TTCTTCATC- -GATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.CTTTAGTATC- -GATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATC- -GATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATC- --ATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATC- CGATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATCA -----CTCGAAGgAGAGGTTGTC-GTGTTGTCTTCTCTTT.ACTTATG.ATGAAACATACACGGGAAACCTCTT.TTGGAGTAT-- -GATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATC- -GATACTCGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATC- TGATACTTGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATCA TGATACTTGAAGgAGAGGTTGTCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATCA CGATACTTGAAGgAGAGGTTATCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATCA CGATACTTGAAGgAGAGGTTATCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATCA CGATACTTGAAGgAGAGGTTATCCGTGTTGTCTTCTCTTT.ATTTATG.ATGAAACATACACGGGAAACCTCTT.TTTTAGTATCA -GCTACTTGAAG.AGAGGTTATCCTTTGTGTGTTTGCTTT.ACGCGAA.ATGAAT-ATGCAAGGGCAAGCTCTC.TTCGAGGAGC- -GCTACTTGAAG.AGAGGTTATCCTTTGTGTGTTTGCTTT.ACGCGAA.ATGAAT-ATGCAAGGGCAAGCTCTC.TTCGAGGAGC- TGCTACTTGAAG.AGAGGTTATCCTTTGTGTGTTTGCTTT.ACGCGAA.ATGAAT-ATGCAAGGGCAAGCTCTC.TTCGAGGAGCA -GCTACTTGAAG.AGAGGTTATCCTTCGTGTGTTTGTATG.AT-TGTA.ATGAAT-ATGCAAGGACAAGCTCTC.TCCGAGGAGC- -GCTACTTGAAG.AGAGGTAATCCTTCATGCATTTGCTTT.ACTTGCA.ATGATT-ATACAAGGGCAGACTCTC.TCTGGGGAGCA TGCTACTTGAAG.AGAGGTAATCCTTCATGCATTTGCTTT.ACTTGCA.ATGATT-ATACAAGGGCAGACTCTC.TCTGGGGAGCA TGCTACTTGAAG.AGAGGTAATCCTTCACGCATTTGCTTT.ACTTGCA.ATGATT-ATACAAGGGCAGACTCTC.TCTGGGGAGCA ----------AG.CGAGGTTGCCCTTTGTATATTCGGTTT.ATTGACA.TGGGAT-ATACAAGGGCAAGCTCTC.T---------- ----ACTTAAAG.CGAGGTTGCCCTTTGTATATTCGGTTT.ATTGACA.TGGAAT-ATACAAGGGCAAGCTCTC.TGTGAGTA--- ---TACTTAAAG.CGAGGTTGCCCTTTGTATATTCGGTTT.ATTGACA.TGGAAT-ATACAAGGGCAAGCTCTC.TGTGAGTA--- ---TACTTAAAG.CGAGGTTGCCCTTTGTATATTCGGTTT.ATTGACA.TGGAAT-ATACAAGGGCAAGCTCTC.TGTGAGTA--- ---TACTTAAAG.CGAGGTTGCCCTTTGTATATTCGGTTT.ATTGACA.TGGAAT-ATACAAGGGCAAGCTCTC.TGTGAGTA--- ---TACTTAAAG.CGAGGTTGCCCTTTGTATATTCGGTTT.ATTGACA.TGGAAT-ATACAAGGGCAAGCTCTC.TGTGAGTA---