Rfam: Seed sequence alignment for RF03161

URS0001A238E8_1189619/1-65 Psychroflexus gondwanensis ACAM 44 0.0 URS0001A231EA_12908/1-65 unclassified sequences 0.0 URS0001A24526_12908/1-65 unclassified sequences 0.0 URS0001A241C4_12908/1-65 unclassified sequences 0.0 URS0001A23B02_313595/1-65 Psychroflexus torquis ATCC 700755 0.0 URS0001A241AA_1123035/1-65 Psychroflexus tropicus DSM 15496 0.0 URS0001A233A4_12908/1-65 unclassified sequences 0.0 URS0001A244D1_12908/1-65 unclassified sequences 0.0 URS0001A23268_12908/1-65 unclassified sequences 0.0 URS0001A2469C_929704/1-67 Myroides odoratus DSM 2801 0.0 URS0001A2424D_12908/1-69 unclassified sequences 0.0 URS0001A239AA_12908/1-69 unclassified sequences 0.0 URS0001A2338A_12908/1-68 unclassified sequences 0.0 URS0001A23BD8_12908/1-57 unclassified sequences 0.0 URS0001A24242_12908/1-68 unclassified sequences 0.0 URS0001A23607_1034807/1-67 Flavobacterium branchiophilum FL-15 0.0 URS0001A2377D_12908/1-67 unclassified sequences 0.0 URS0001A241CD_12908/1-69 unclassified sequences 0.0 URS0001A240EB_12908/1-59 unclassified sequences 0.0 URS0001A2446A_12908/1-68 unclassified sequences 0.0 URS0001A23519_1042376/1-66 Flavobacteriaceae bacterium S85 0.0 URS0001A2389C_12908/1-68 unclassified sequences 0.0 URS0001A24864_12908/1-67 unclassified sequences 0.0 URS0001A2482F_12908/1-65 unclassified sequences 0.0 URS0001A2435B_12908/1-60 unclassified sequences 0.0 URS0001A24AD0_12908/1-58 unclassified sequences 0.0 URS0001A2367E_12908/1-59 unclassified sequences 0.0 URS0001A23327_12908/1-61 unclassified sequences 0.0 URS0001A23D51_12908/1-60 unclassified sequences 0.0 URS0001A2400C_12908/1-66 unclassified sequences 0.0

UACUU.UUGCACAAu............UGAAUAG...........AAAAC.................CUAUUCU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..CAAUAUUGGCAUG UACUU.UUGCACGAu............UGAAUAG...........AAAAC.................CUAUUCU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..CAAUAUUGGCAUG UACUU.UUGCGCCAu............UAAAUAGa..........AAA--................uCUAUUUU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UACUU.UUGCACGAu............CGAAUAG...........AAAAA.................CUAUUCU.....................................-CGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UACUU.UUGCACGAu............UGAAUAGa..........AAA--................uCUAUUUU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UACUU.UUGCAGGAu............UGAAUAGa..........AAA--................uCUAUUCU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UACUU.UUGCAGGAu............UGAAUAGa..........AAA--................uCUAUUUU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UACUU.UUGCACGAu............CGAAUAGa..........AAA--................uCUAUUCU.....................................-AGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UACUU.UUGCACGAu............UGAAUAGa..........AAA--................uCUAUUCU.....................................-CGC.AUAAA.AAUUAUU...GA-AA..UAAUAUUGGCAUG UAACU.UUGCAAUU.............GAAUUUUag.........AGAA-...............cuAGAAUUC.....................................GUAC.AUAAA.AAUCAU-...UA-AA..GAAUAUUGGCAUG UAUCU.UUGCGCCU.............CGGUUGCuga........AAGG-..............ucaG-GACCA.....................................-UAC.AUAAA.AAUUAUU...UAAAU..AAAUAUUCGAAUG UAUCU.UUGCGCCU.............CGGUAACuga........AAGG-..............ucaGG-ACCA.....................................-UAC.AUAAA.AAUUAUU...UAAAU..AAAUAUUCGAAUG UACCU.UUGCGGUCcc...........UUUAGACgc.........UUA--...............gcGUUGAAU.....................................-GGC.AUAAC.AAUCAUU...GA-AA..CAAUAUUGGAAUG UAGUU.UUGCCACCu............UA-----...........AAU--.................-----UA...................................ucAUAC.AUAAU.AAACAUU...UAAAA..CAAUUUUGGCAUG UAUAU.UUGCACCG.............CAAAAAGga.........GUG--...............ucCUUUUUG.....................................AUAC.AUAAC.AAUCAUU...UAUAG..AAAUAUUAGCAUG UAAAU.UUGCACCG.............UC-UUACa..........AAAGC................uGUAAUGA....................................cAUAC.AUAAG.AAUUAUU...AA-AU..AAAUAUUGGAAUG UACCU.UUGCACCGu............CUUACAAa..........AAG--................uUUGUAGG.....................................CUAC.AUAAU.AAUUAUU...UUUAU..CAAUAUUGGCAUG UACCU.UUGCACCG.............UCUAAACgaa........AAG--..............uucGU--GGC...................................gaCUAC.AUAAU.AAACAUU...UA-AA..UAAUUUUAGCAUG UAUCU.UUGCAGCC.............GAUU---...........UAAA-.................---AAUC.....................................GUAC.AUAAC.AAACAUU...AAAAA..CAAUUUUGGCAUG UAUAU.UUGCGCCU.............CUGUUUA...........UAACAgau..............UAAAUUG.....................................-UAC.AUAAU.AAUUAUU...UAAAA..CAAUGUUUGAAUG UAUCU.UUGCCGUCc............GAUUACC...........AAAGA.................GGUAAUU.....................................-UGC.AUUAU.AAUUAUU...UACAA..AAAUAUUAGUAUG UAUAU.UUGCCCUC.............AAUUCUGa..........GAA--................uCAGAGUU...................................gcCUAC.AUAAA.AAUUAUU...UAAAU..AAAUAUUGGAAUG UAUAU.UUGCACCG.............UCUAAUUaa.........AAG--...............uuAAUUAGG.....................................CUAC.AUAAG.AAUCAUU...UU-AA..CAAUAUUGGCAUG UAUCU.UUGCCGGCu............CAACGGG...........AAAAC.................CCCGUUA.....................................-UAC.AUAAA.AACUAUU...UA-AA..UAAUAUUGGCAUG UAUCU.UUGCCAUC.............GCU----...........UUAAUu................----AGC...................................gaAUAC.AUAAC.AAUCAUU...GA-AA..UAAUAUUAGCAUG UAUCU.-UGCAGC-.............GCU----...........UUAAUu................----AGC...................................caAUAC.AUAAU.AAUCAUU...GA-AA..UAAUAUUUGCAUG UAUCU.UUGCAGC-.............GCU----...........UUAAUu................----AGC...................................caAUAC.AUAAC.AAUCAUU...GA-AA..UAAUAUUAGCAUG UAUAU.UUGCCA--.............UCGCU--...........UUAAUu................--AGCGA....................................aAUAC.AUAAC.AAUCAUU...GA-AA..UAAUAUUAGCAUG UACAU.UUGCAGCC.............UU-----...........AAAUUuaa..............-----AA....................................cAUAC.AUAAU.AAACAUU...AAAAA..CAAUUUUAGCAUG UACCU.UUGCCCCG.............UC-AGUGaa.........AAG--...............uuCACUUGA.....................................CUAC.AUAAU.AAUUAUU...UU-AA..CAAUAUUGGAAUG