# STOCKHOLM 1.0
#=GF ID Phe_leader
#=GF AC RF01859
#=GF DE Phenylalanine leader peptide
#=GF AU Gardner PP; 0000-0002-7808-1213
#=GF GA 55.0
#=GF NC 54.9
#=GF TC 55.0
#=GF SE Predicted; CMfinder
#=GF SS Predicted; CMfinder
#=GF TP Cis-reg; leader;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 28.86 -Z 2958934 CM SEQDB
#=GF DR SO; 0000836; mRNA_region;
#=GF DR GO; 0006520; cellular amino acid metabolic process;
#=GF RN [1]
#=GF RM 360214
#=GF RT Nucleotide sequence of the leader region of the phenylalanine operon of
#=GF RT Escherichia coli.
#=GF RA Zurawski G, Brown K, Killingly D, Yanofsky C
#=GF RL Proc Natl Acad Sci U S A. 1978;75:4271-4275.
#=GF RN [2]
#=GF RM 21177642
#=GF RT Two groups of phenylalanine biosynthetic operon leader peptides genes: a
#=GF RT high level of apparently incidental frameshifting in decoding Escherichia
#=GF RT coli pheL.
#=GF RA Gurvich OL, Näsvall SJ, Baranov PV, Björk GR, Atkins JF
#=GF RL Nucleic Acids Res. 2010;39:1-14.
#=GF WK Attenuator_(genetics)
#=GF SQ 71

ABVX01000063.1/6342-6467       CAUGACGAAUAAACUGUUC---UUCUUCG-UA-UU-CUUUUUCACC---------UU--CCC--CUGAUU---UGG-GA--GGC-G-A-UU-CGUC-GU-------------AAGAGCAAGAAUACGAAGACGAAC--A--A--AAAAGCCUCCUG---ACCAGGAGGCUUUUUUU-AU
ABVY01000102.1/6316-6441       CAUGACAAAUAAACUGUUC---UUCUUCG-UA-UU-CUUUUUCACC---------UU--CCC--CUGAUU---UGG-GA--GGC-G-A-UU-CGUC-GU-------------AAGAGCAAGAAUACGAAGACGAAC--A--A--AAAAGCCUCCUA---ACCAGGAGGCUUUUUUU-AU
CU928158.2/475392-475267       AAUGAAACAAACACCGUUC---CUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAC----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAAACAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--AAUCGGGGGGCCUUUUUU-AU
BX950851.1/3766208-3766333     CAUGAUAAAUAAACCGUUU---UUCUUCG-UA-UU-CUUUUUCACC---------UU--CCC--CUGAUU---UGG-GA--GGC-G-A-UU-CGUC-GU-------------AAGAGCAAGAAUACGAAGACGAAC--A--A--AAAAGCCUCCUG---ACAAGGAGGCUUUUUUU-AU
AAKB02000001.1/3261022-3260897 CAUGAAACACACACCGUUU---UUCUUCG-CA-UU-CUUUUUUAUC---------UU--CCC--CUGAAA----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAAACAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--AAUCGGGGGGCCUUUUUU-AU
CP000036.1/2641439-2641564     CAUGAAACACACACCGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAAACAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--AACCGGGGGGCCUUUUUU-AU
CP000034.1/2566676-2566550     CAUGAAACACACACCGUUU---UUCUUCG-CA-UU-CUUUUUUACC--------AUU--CCC--CUGAAU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAAACAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--AAUCGGGGGGCCUUUUUU-AU
ABHW01000042.1/27505-27630     CAUGAAACACACACCGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAAACAGAAUGCGAAGAAGAAC--A--A--UAAGGCCUCCCA--AAUCGGGGGGCCUUUUUU-AU
AACY021111109.1/462-586        CGUGAAACGACUAGCGUUC---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAC----GG-GA--GGC-G-A-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--CAAGGCCUCCCA--AA-CGGGAGGCCUUUUUU-AU
CP000964.1/1216577-1216453     CAUGAAACGUGUCCCGUUC---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGACC----GG-GA--GGC-A-A-UU-CGUC-GU-------------AUAAGAAAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--C-CCGGGAGGCCUUUUUU-AU
AM933172.1/2760279-2760404     UAUGAAGCUAACCCGGUUU---UUCUUCG-CA-UU-CUUUUUUAUC---------UU--CCC--CUGACU----GG-GA--GGC-G-U-UU-CGUC-AU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--GAAGGCCUCCCC--CACCGGGAGGCCUUUUUU-AU
CP001113.1/2810634-2810759     UAUGAAGCUAACCCGGUUU---UUCUUCG-CA-UU-CUUUUUUAUC---------UU--CCC--CUGACC----GG-GA--GGC-G-U-UU-CGUC-AU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--GAAGGCCUCCCC--CACCGGGAGGCCUUUUUU-AU
ABKX01000001.1/775502-775379   CAUGAAACAUACUCCGUUC---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAC-----G-GA--GGC-A-U-UU-CGUC-GU-------------GUGAAACAGAAUGCGAAAACGAAC--A--A--UAAGGCCUCCCA--AA-CCGGAGGCCUUUUUU-AU
CP000653.1/3354244-3354369     CAUGAAAUAUACCCCGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--CAAGGCCUCCCA--AACCGGGAGGCCUUUUUU-AU
BAAW01013391.1/206-81          CAUGAAACUUGUCCCGUUC---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--CAACGGGGGGCCUUUUUU-AU
CP000822.1/3653020-3653144     CAUGAAACUUAUCCCGUUC---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAAAAAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--CA-CGGGAGGCCUUUUUU-AU
CAAQ01002953.1/267-141         UAUGAAGCUCACCCGGUUU---UUCUUCG-CA-UUUCUUUUUUAUC---------UU--CCC--CUGACC----GG-GA--GGC-G-U-UU-CGUC-AU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--GAAGGCCUCCCC--CACCGGGAGGCCUUUUUU-AU
CP000826.1/976810-976684       CAUGCUCCGUAAACCGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--G--CAAAGCCUCCUG-AAAUCAGGGGGCUUUUUUU-AU
CP000880.1/252138-252014       UAUGCAACUAGCUCAGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUC----GG-GA--GGC-G-U-UU-CGUC-AU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--GAAGGCCUCCCA--CACCGGGGGGC-UUUUUU-AU
AM286415.1/981117-980993       AAUGAUUAAUAAAGUGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--CAAAGCCUCCCA---AGCGGGAGGCUUUUUUU-AU
CP000783.1/622003-621879       CAUGAAGCAACACGCGUUU---UUCUUCG-CU-UU-CUUUUUUACC---------UU--CCC--CUGAAC----GG-GA--GGC-G-U-GU-CGUC-GU-------------AC-AGAAAGCAAGCGAAGACGAAC--U--A--ACAGGCCUCCCA--CUCCGGGGGGCCUUUUUU-AU
AP008232.1/980916-980791       CAUGACAACACCGUCGUUU---UUCUUCG-CU-UU-CUUUUUUAAC---------UU--CCG--UUGCUAA-GAGG-CC--CGC-G---CU-CGUC-GU-------------GUGAGAAAUAAAGCGAAGACGAAC--C--G--CAAAGCCUCCUG--AAACAGGGGGCUUUUUUU---
BX936398.1/1012105-1011981     GAUUCUCAAUAAAGUGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUAAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--GAAAGCCUCCCA---AGCGGGAGGCUUUUUUU-AU
CU468135.1/2953379-2953512     GAUGAAACCCGUAUCGUUU---UUCUUCG-CA-UU-CUUUUUUACCUUCUUUACCUU--CCC--CUGAUC---AGG-GA--GGC-G-A-UU-CGUC-GU-------------GUAAGAAGUCAUGCGAAGACGAAC--A--A--UAAAGCCUCCCC----CCGGGAGGCUUUUUUU-UU
CP000901.1/3696226-3696353     GAUUCUCAAUAAAGUGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUAAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAA--U--A--AAUAUCCUCCGGCAUAGCCGGAGGUUUUUCAU-AU
X60420.1/299-423               AAUGAAACCUGAUCUGUUU---UUCUUCG-CU-UU-CUUUUUUACC---------UU--CCC--CUGAAC----GG-GA--GGC-C-A-UU-CGUC-GU-------------GUGAAAAUGAAAGCGAAGACGAAC--A--C--CGAAGCCUCCCA---ACCGGGAGGCUUUUUUU-UG
CP000789.1/1011988-1011867     CAUUCAACAAA-CCUGUUU---CUUUUUG-AC-UU-CUUUUUC--C---------UU--CCA--UAG--U----UG-GA--GGG-G-C-UA-ACUC-GUU-----------UGUGAAAGAAAAGUCAAAAACAAAC--A-----GAAAGCCUCCCA--CAUCGGGGGGCUUUUUUU-AU
AAPH01000053.1/27723-27600     GAUGACAAUACGCCUGUUU---UUCUUUA-GC-UU-CUUUUUUAUG---------UC--ACC--CUAGU-----GG--A--GGC-G-A-UU-CGUU-AC-------------GCAAAAAAUAAGCUAAAGACGAAU--A--G--ACAGCCUCCUCU--GACCAAGGAGGCUUUUUU-GU
AAZW01000034.1/43904-43783     GCAAACUCAAUCUUUGUUU---AUUUUUG-AC-UU-CUUUUUU--C---------UU--CCG--UAAA-U----CG-GA--GGC-U-A----AGUC-GUU-----------UUAGAAAAACAAGUCAAAAACGAAC--A--A--GAAGCCUCCCAC---ACUAGGGAGGCUUUUUU-AU
AAPS01000032.1/7970-8090       CAUUUAACCU-CACUGUUU---AUUUUUG-AC-UU-CUUUUU--CC---------UC--CCA--UAGUUG---GAG-GG---GC-GAA-CU-CGU--UU-------------GUGAAAGAAAAGUCAAAAACAAAC--A--G--A-AAGCCUCCCA--AAUCGGGAGGCUU-UUUU-AU
ACFN01000146.1/39072-39193     CACUUAACCU-CACUGUUU---AUUUUUG-AC-UU-CUUUUUC--C---------UU--CCA--UAG--U----UG-GA--GGG-G-C-UA-ACUC-GUU-----------UGUGAAAGAAAAGUCAAAAACAAAC--A-----GAAAGCCUCCCC--ACUCGGGAGGCUUUUUUU-AU
AAKK02000051.1/23374-23254     CAUUUAACCU-CACUGUUU---AUUUUUG-AC-UU-CUUUUUC--C---------UC--CC---AUAGUCG-GA-G-GG---GC-GAA-CU-CGU--UU-------------GUGAAAGAAAAGUCAAAAACAAAC--A--G--A-AAGCCUCCCA--AAUCGGGAGGCUU-UUUU-AU
AAUB01000228.1/183-57          GAUUCUCAAUAAAGUGUUU---UUCUUCCCCA-UA-GUGUAGAAC----------UU--CCC--CUAAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAU--A--A---AUAUCCUCCGGCAUAGCCGGAGGUUUUUCAU-AU
ACCV01000159.1/28887-28768     GCAAACAAACAACCUGUUC---UUUUUUG-AC-UU-CUUUUUU------------CU--CCA--CUAAAU---UUG-GA--GGCAG-C-CU-CGUU-UG--------------CGGAAGAUAAGUCAAAAACGAAC--A--G--GAAGCCUCCCAC------UGGGAGGCUUUUUU-AU
ABJD02000101.1/756439-756563   AAUUAUAUGCAAAUCGUCG---CUUUUCG-UU-UC-UUCUUUUACU---------UUAG--CACCUGAGUU-UC----G--GGG-G-C-UU-GCGC-GC-------------GUAAGAAAAGAAACGAAAAGUUAC--G--C--UAAAGCCUCCGU-----CAGGAGGCUUUUUUG-UU
CP000472.1/3971464-3971582     CAAAAUCCUAACUGC---G---UUUUUUA-CU-UU-CUUUUUUAUG---------CC--CCC--CACCCUC--GGA-GG--CGG-A-A-UU--UCG-GU-------------GUAAAAACGAAAGUGAAAAU------U--C--CAAAGCCUCCCA--CA-CGGGAGGCUUUUUUA-AU
CP000891.1/1537498-1537382     AAUGAUAACAGCAGCUU------UUUUUA-CU-UU-CUUUUUUACA---------CC--CCC--ACUCUA----GGAGG--CGG-A-U-UU-ACU--GU-------------GUAAAAACGAAAGUAAAAA-------U--C--CAAAGCCUCCCA---ACUGGGAGGCUUUUUUG-UC
CP001252.1/3669220-3669337     AAUGAUAACAGCAGCUU------UUUUUA-CU-UU-CUUUUUUACA---------CC--CCC--CACUCUA--GGA-GG--CGG-A-U-UU-ACU--GU-------------GUAAAAACGAAAGUAAAAA-------U--C--CAAAGCCUCCCA---ACUGGGAGGCUUUUUUG-UC
CP000606.1/1236423-1236304     AAUGAACACCCAAGC---U---UUUUUUA-CU-UU-CUUUUUUAUU---------CC--ACC--CUUCUA----GG-GAGGCGG-A-A-UU--UCG-GU-------------GUAAAAACGAAAGUAAAAAU------U--C--CAAGGCCUCCCA--UUAUGGGGGGCUUUUUUA-UU
ABCH01000026.1/57679-57560     GUACCCGAUUAAUCUGUUC---UUUUUUG-AC-UU-CUUUUUU------------CU--CCA--CUAGGC---UUG-GA--GGC-U-UCUU-CGUU-UU--------------CGAAAGAAAAGUCAAAAACGAAC--G--G--AAAGCCUCCCAA------UGGGAGGUUUUUUU-AU
ABVP01000026.1/500726-500603   AAUGUUAA--AUAUCGCUU---UUUUCCG-UU-UC-UUUUUUUACUUU-----AGCG--C----CUAAUUCAAG---GG-GGC------UU-UUGC-GC-------------GUAAGAAAAGAAACGAAAAGUAGC--G--C--CUGAGCCUCCAA--UA--UGGAGGCUUUUUUG-UU
CP000961.1/1603510-1603389     GAAACAACUUAACGUUCAC---UUUUUUA-CU-UU-CUUUUUUAUU---------CC--CCC--CAUACA----GG-GA--GGC-G-G-AA-UUUCGGU-------------GUAAAAACGAAAGUGAAAAU------U--C--CAAAGCCUCCCA--C-UAGGGGGGCUUUUUUG-UG
ACNS01000001.1/177701-177579   UAUGAUGCAUA--CAGUUA---UUUUUCG-CU-UC-UUUUUUUACU---------UU--AGCGCCUGAUU--------A--CAG-G-A-GG-CUUGCGC-------------GUAAGAAUAGAAACGAAAAAUAGC--G--C--CGAAGCCUCCCA---UCGUGGAGGCUUUUUUG-UU
AAOH01000006.1/263743-263622   CAAAAUCACCGUAUUUACU---UUUUUAG-CU-UU-UUUAU-GGAC---------CA--CCU--AAAUUU----GG-GA--GGC-G-A-UUCCGUC-AC-------------GGC-AUAAAAAAGUCAAAACG--A--A--U--UCAAGCCUCCCA---ACCGGGAGGCUUUUUUU-UU
CP000507.1/1088263-1088138     CAUGAAAUUUACCGUGAAUGCAGUUUUUA-CU-UU-CUUUUUUAUUC------ACUU--CCC--CUGAG-----GA-GG--CGG-A-U-UU-UCU--GU-------------GUAAAAACGAAAGUGAAAAU--UC---------AAAGCCUCCCA-CCACCGGGAGGCUUUUUUG-UU
AAWF01000042.1/6438-6560       GACACCUCAUUUCCUGUAC---UUUUUUG-AC-UU-CUUUUU---U---------CU--CCA--AUAAUGU--UUG-GA--GGC-UCG-CU-CGUU-GU--------------UCAAAGACAAGUCAAAAACGAAC--A-----GAAAGCCUCCUC---UCAAGGGGGCUUUUUUU-AU
ACLE01000020.1/34798-34920     AAUGUUAA--AUAUCGCUU---UUUUCCG-CU-UC-UUUUUUUACU---------UU--AGCGCCUAAUU-----U-UG--GGG-G-C-UU-UUGC-GC-------------GUAAGAAAAGAAACGAAAAGUAGC--G--C--CGGAGCCUCCAU----UUUGGAGGCUUUUUUG-UU
BX571867.1/333276-333152       AACAUUAUGUCUUUAGCUU---UUUUUCG-CA-UC-UUUUUUUACUUU----AGCAC-------CUGAAUUCAG----G--GGG-C-U-UU-GCGC----------------GUAAGAAAAGAAACGAAAAGUAGC--G--C--CUGAGCCUCCGU----UGUGGAGGCUUUUUUG-UU
CP000644.1/3503246-3503368     ACCUAUGCACGCACCAUUC---UUCUUUG-CU-UU-CUCGUUUAUC---------CG--GCC--CACAUGA--GGG-AA--GGC-CCU-GU-CGUC-GC-------------GUGAAC-AGCAACCAAAGACGAAU--C------GAGCCUCCCCU-----AGUGGAGGCUUUUUU-UU
CP000931.1/1348238-1348118     AAUAAAAUCCAUACUGC-U---UUUUUUA-CU-UU-CUUUUUUAUG---------CC--CCC--CACCCUC--GGA-GG--CGG-A-A-UU--UCG-GU-------------GUAAAAACGAAAGUAAAAAU------U--C--CAAAGCCUCCCA--CA-UGGGAGGCUUUUUUA-UA
CP000851.1/1284656-1284538     CAAAAUCCAUACUGU---A---UUUUUUA-CU-UU-CUUUUUUAUG---------UC--CCC--CACCCUC--GGA-GG--CGG-A-A-CU--UUG-GU-------------GUAAAAACGAAAGUAAAAAU------U--C--CAAAGCCUCCCA--CA-UGGGAGGCUUUUUUA-UA
AE014299.1/1425124-1425006     GAAAACAAAUACCCUAGCG---UUUUUUA-CU-UU-CUUUUUUACA---------CC--CCC--ACUCUA----GGAGG--CGG-A-U-UU-ACU--GU-------------GUAAAAACGAAAGUAAAAAUC-----------CAAAGCCUCCCA----CUGGGAGGCUUUUUCG-UC
CP000821.1/1390785-1390664     GACAUUAUAUAACGUUCAC---UUUUUUA-CU-UU-CUUUUUUAUU---------CC--ACC--CAUCUC----GG-GA--GGC-G-G-AG-UUUCGGU-------------GUAAAAACGAAAGUGAAAAU------U--C--CAAAGCCUCCCA---CUAGGGAGGCUUUUUUG-UA
CP000447.1/3502166-3502287     GAACAAAAAAAUAUUCAGC---CUUUUUA-UU-UU-CUUUUUUAUU---------CA--GCC--CACCCC---UGG-AG--GCG-G-A-UU-UUCU-GU-------------GUAAAAACGAAAAUGAAAAU------U--C--UAAAGCCUCCCA---ACUGGGAGGCUUUUUUG-UC
CU928163.2/2033912-2033788     CAAGCAAUGAAUGCUGCUA---UUUUCCG-CU-UC-UUUUUUUACUUU-----AGCU--CCU--GACUCC----AG-GA-GGC------UA---GC-GC-------------GUGAGAAGAGAAACGGAAAACAGC--G--CCUGAAAGCCUCCCA-----GUGGAGGCUUUUUUU-GU
ABXW01000077.1/6386-6505       CAUGAAACUAA----AUGC---UGUUUUC-UU-UU-UCUUCUUUAG---------CC--ACU--CACAUU---AAG--G--GGC-U-U-UU--GUC-GU-------------UCGAGAAAAAAAAGAAGACAAUAU--U--U--UAAAGCCUCCUA---CCUAGGGGGCUUUUUUA-UU
ACDJ01000007.1/23401-23525     CAAGCAUGA-AUGCUGCUA---UUUUCCG-CU-UC-UUCUUUUACUUU-----AGCA--CCU--GAACUC----AG-GA--GG----C-UU---GC-GC-------------GUGAAAGAAGAAACGGAAAACAGC--G--CCUAAAAGCCUCCCU----GGUGGAGGCUUUUUUU-AU
AE014075.1/1955244-1955120     CAAGCAAUGAAUGCUGCUA---UUUUCCG-CU-UC-UUUUUUUACUUU-----AGCA--C----CUGACUCCAG---GA--GGC-----UA--GC--GC-------------GUGAGAAGAGAAACGGAAAACAGC--G--CCUGAAAGCCUCCCA-----GUGGAGGCUUUUUUU-GU
ABAN01000011.1/149818-149695   CAAGCAUGA-ACGCUGCUA---UUUUCCG-UU-UC-UUUUUUUACU---------UU--AGCACCUGAUUC--C----A--GGA-G-G-CU--AGC-GC-------------GUGAAAAACGAAACGAAAAACAGCGCA--A--AAAAGCCUCCUG-----AUGGAGGCUUUUUUU-GU
CP000647.1/2386625-2386501     CAAGCAUGA-AUGCUGCUA---UUUUCCG-CU-UC-UUUUUUUACUUU-----AGCA--CCU--GAACUC----AG-GG-GGC------UU---GC-GC-------------GUGAAAGAAGAAACGGAAAACAGC--GCCA--GAAAGCCUCCCC----UGUGGAGGCUUUUUUC-GU
CP000462.1/1191016-1190882     ACUCAUGCACGCACCAUUC---UUUUUUG-CU-UU-CUCGUUUAUC---------CG--GCC--CUCAUGA--GGG-AA--GGC-C-C-GU-CGUC-ACGUGAAGCACUCGCGUAAAC-AGAAAGCAAAGACGAAU--C------GAGCCUCCCCU-----AGCGGAGGUUUUUUU-UU
CP002457.1/1319390-1319277     AAUGACAGCAA-CUU--------UUUUUA-CU-UU-CUUUUUUACA---------CC--CCC--ACUCUA----GGAGG--CGG-A-U-UU-ACU--GU-------------GUAAAAACGAAAGUAAAAA-------U--C--CAAAGCCUCCCA---AAUGGGAGGCUUUUUUG-UC
AALE02000041.1/17282-17158     AAUGAUCAAUAAAGUGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--UAAAGCCUCCCA--GA-CGGGAGGCUUUUUUU-AU
ACCD01000044.1/6255-6379       GAUGAUCAAUAAAGUGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--UAAAGCCUCCCA---AGCGGGAGGCUUUUUUU-AU
BA000037.2/709275-709154       GCAAAUCCACUCUCUGUUU---AGUUUUG-AC-UU-CUUUUU---U---------CU--UCG--AUA--G----CG-GA--GGG-G-C-UA-ACUC-GUU-----------UGUGAAAGAAAAGUCAAAAACAAAC--A-----GAAAGCCUCCCA--CAUCGGGGGGCUUUUUUA-UU
ABWL02000021.1/490662-490537   CAUGAAACUUGUCCCGUUC---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAAU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--UAAGGCCUCCCA--CACCGGGGGGCCUUUUUU-AU
ABXV02000042.1/6448-6567       AAUGAAUUUAA----AUUU---UGUUUUC-UU-UU-UCUUCUUUAG---------CC--ACU--CUUAUU---AAG--G--GGC-U-U-UU--GUC-GU-------------UCGAGAAAAAAAAGAAGACAAAAU--U--U--UAAAGCCCCCUC---UUUUGGGGGCUUUUUUU-AU
AALF02000003.1/44877-44755     UAUGAUACAUG--CAGUUA---CUUUUCG-CU-UC-UUUUUUUACU---------UU--AGCGCCUGAUUU--C----A--GGA-G-G-CU--UGC-GC-------------GUAAGAAUAGAAACGAAAAAUAGC--G--C--CUAAGCCUCCCA---UCGUGGAGGCUUUUUUG-UU
ABWM02000032.1/6775-6899       UAUGAAACAUACGCCGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--CAAGGCCUCCCU---ACCGGGAGGCCUUUUUU-AU
AALC02000063.1/6237-6361       GAUGAUCAAUAAAGUGUUU---UUCUUCG-CA-UU-CUUUUUUACC---------UU--CCC--CUGAUU----GG-GA--GGC-G-U-UU-CGUC-GU-------------GUGAUAAAGAAUGCGAAGACGAAC--A--A--UAAAGCCUCCCC---AGCGGGAGGUUUUUUUUUA-
ACCI02000099.1/122515-122398   UAUGAAUCUUA----AUUU---UGUUUUC-UUUUU-CUUCUUUAGC---------AA--CUC--CUAAUU----GG-G---GGC-U-U-UU--GUC-GU-------------UCGAGAAAGAAAAGAAGACAAAAU--U--A--GAAAGCCCCCUC-----UAGGGGGCUUUUUUU-AU
#=GC SS_cons                   :::::::::::::::((((...-((((((.((.((.((((-((((,.........,<..<<<..______....>>.>>..<<<.<._.__.>>>>.,,.............))))-))))))))))))))-))))..:..:..:<<<<<<<<<<_...___>>>>>>>>>>::::.::
#=GC RF                        aAugAaaaauauacuGuUc...UUuUUcg.cu.Uu.cuuuUUuacc.........uu..cCc..CUaauu....gG.ga..Ggc.g.u.UU.cguC.GU.............guaAaaaagaAagcgAAaAcgAaC..a..a..uAAaGCCuCCca...AccgGGaGGCuUUUUUu.aU
//
