# STOCKHOLM 1.0
#=GF ID snoU36a
#=GF AC RF01302
#=GF DE SnoRNA U36a
#=GF AU Wilkinson A; 0000-0001-7406-0151
#=GF GA 45.0
#=GF NC 44.7
#=GF TC 45.4
#=GF SE Predicted; WAR; Wilkinson A
#=GF SS Predicted; WAR; Wilkinson A
#=GF TP Gene; snRNA; snoRNA; CD-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 25.59 -Z 2958934 CM SEQDB
#=GF CL CL00051
#=GF DR URL; http://bioinf.scri.sari.ac.uk/cgi-bin/plant_snorna/home;
#=GF DR URL; http://lowelab.ucsc.edu/snoRNAdb/;
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF DR snoopy; Arabidopsis_thaliana300168;
#=GF DR SO; 0000593; C_D_box_snoRNA;
#=GF RN [1]
#=GF RM 11780637
#=GF RT Multiple snoRNA gene clusters from Arabidopsis.
#=GF RA Brown JW, Clark GP, Leader DJ, Simpson CG, Lowe T
#=GF RL RNA. 2001;7:1817-1832.
#=GF WK Small_nucleolar_RNA
#=GF SQ 15

DQ108835.1/292-381         UGGCAAUGAUUAUA----AACUUACCCGCGCUUCUGAGAUUAU--UCAAUGAAGUAGAUACGGUAA---AUACAUGGUUGAAUUUCUUAAUAUGAGCCA
DQ108711.1/301-390         UGGCAAUGAUUAUA----AACUUACCCGCGCUUCUGAGAUUAU--UCAAUGAAGCAGAUACGGUAA---AUACAUGGUUGAAUUUCUUAAUAUGAGCCA
AASG02001178.1/41441-41526 UGGCAAUGAUUAAA----GAUUUAUCCGCGCUUCUGAGAGAUA--UCAAUGAAGCAC--AAAAGAA---AU--AUGGUUGAAUUUCUUGAUAUGAGCCA
AARH01005974.1/498-589     UGGCGAUGAUUAAAAUGGAUUUUAUCCGCGCUUCUGAGAGAAA--UCAAUGAAGCAA--AAACAUA---AUUAAUGGUUGAAUUUCUUGAUAUGAGCCA
AY220676.1/4-88            UGGCAGUGAUUUGA----CA-UUACCCGCGCUUCUGAUAUAA---UCCGUGAAGCAAAGGG---AA---AAUAAUGGUUGAAUUCCUUAAUAUGAGCCA
CP000585.1/696645-696556   UGACGAUGAUGAUA----AAAAUAUCCGCGCUUCUGAUGAGUUCACGCUCGUGAGGUUAGACGAUA----U-UAUGGUUGAAUUUCUUCGGCUGAGUCA
AJ532539.1/3-90            UGGCAGUGAUUUGA----CAUUUACCCGCGCUUCUGAUUUAA---ACCGUGAAGUUAAGGG-AAAA---AAUAAUGGUUGAAUUUCUUAAUAUGAGCCU
AL161496.2/97232-97142     GGGCUAUGAUUACA----AAAUUAUCCGCGCUUCUGAGACUUAGUUCUAUGAAGUAUA-UACGAUA---AUCAAUGGUUGAAUUUCUUAAUAUGAGCCU
AM450298.1/4247-4334       UGGCAAUGAUUAUA----UG-UUAUCCGCGCUUCUGAGAGCAA--UCGAUGAAGCAUA-AAGGAAA---AAAAAUGGUUGAAUUUCUUAAUAUGAGCCA
AP004314.3/147764-147680   UGGCAGUGAUUUGA----CA-UUACCCGCGCUUCUGAUAUAA---UCCGUGAAGCAAAGGG---AA---AAUAAUGGUUGAAUUCCUUAAUAUGAGCCA
AACV01015141.1/22699-22615 UGGCAGUGAUUUGA----CA-UUACCCGCGCUUCUGAUAUAA---UCCGUGAAGCAAAGGG---AA---AAUAAUGGUUGAAUUCCUUAAUAUGAGCCA
AAAA02020760.1/6481-6394   UGGCAGUGAUUUGA----CAUUUACCCGCGCUUCUGAUUUAA---ACCGUGAAGUUAAGGG-AAAA---AAUAAUGGUUGAAUUUCUUAAUAUGAGCCU
EU410751.1/4-96            CGGUGAUGAGCAUG----AGUUUAUCCGCGCUUCUGAGGCCUU--GACCGGCCGUGCUGAUACUUACUCUUAUAUGGUUGAAUUUCUUCGCCUGAGCCC
AJ532537.1/4-89            UGGCAGUGAUUUGA----CA-UUACCCGCACUUCUGAUCUAA---UCCGUGAAGCAAAG--GGAAA---AAUAAUGGUUGAAUUUCUUAAUAUGAGCCG
AY220675.1/3-91            UGGCAGUGAUUUGA----CAUUUACCCGCGCUUCUGAUUUAA---ACCGUGAAGUUAAGGGAAAAA---AAUAAUGGUUGAAUUUCUUAAUAUGAGCCU
#=GC SS_cons               <<<<__________...._________________________.._____________________...__________________________>>>>
#=GC RF                    uGGCaaUGAUUauA....aAuUUAuCCGCGCUUCUGAuauaau..uccaUGAAGuaaagaaagaaA...AuuaAUGGUUGAAUUUCUUaAUAUGAGCCa
//
