# STOCKHOLM 1.0
#=GF ID IS102
#=GF AC RF00124
#=GF DE IS102 RNA
#=GF AU Moxon SJ; 0000-0003-4644-1816
#=GF GA 46.0
#=GF NC 45.7
#=GF TC 47.6
#=GF SE Hershberg R
#=GF SS Predicted; PFOLD
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 27.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 12202758
#=GF RT Transcriptome analysis of Escherichia coli using high-density
#=GF RT oligonucleotide probe arrays.
#=GF RA Tjaden B, Saxena RM, Stolyar S, Haynor DR, Kolker E, Rosenow C
#=GF RL Nucleic Acids Res 2002;30:3732-3738.
#=GF CC This family consists of a group of Shigella flexneri and Escherichia coli
#=GF CC RNA genes which are 208 bases in length and are found between the yeeP and
#=GF CC flu genes. The function of this RNA is unknown.
#=GF WK IS102_RNA
#=GF SQ 5

AF200692.2/35693-35898     ACGAUCGAUACCUAUUUUACCGAUCGUUAAUAUCGAUCGUUAUGCUAAUAAUAACUCCUGUUAGCAACGUGCGCAGAUACACA--CAGACAUGAGAUUCAGGGAACAACAGAGCCACACGUCAGAAACUUCCGUCAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACAUCUGUGGAUACCGGCUUUUU
AF233272.1/74-277          ACGAUCGAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUACGUA--CAGA-AAGACAUUCAGGGAACAACAGAACCACAAUUCAGAAACUCCCA-CAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACGUUUGUGGGUACCGGCUUUUU
X16664.4/58046-58251       ACGAUCGAUACCUAUUUCACCGAUCGUUAAUAUCGAUCGUUAUGCUAAUAAUAACUCAUGUUAGCAACGUGCGCAGAUACACA--CAGUCAUGAGAUUCAGGGAACAACAGAGCCACACGUCAGAAACUUCCGUCAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACAUCUGUGGAUACCGGCUUUUU
U24429.1/2410-2615         ACGAUCAAUAUCGAUUUAAUCGAUCGUUUAUAUCGAUCGAUUAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUAUGUUACCAGA-AAGACAUUCCGGGAACAACAGAACCACAAUUCAGAAAUUCCCA-CAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACGUUUGUGGGUACCGGCUUUUU
AE014075.1/1225384-1225586 ACGAUCGAUAACUAUUUAAUCGAUCGUUUAUAUCGAUCGUUAUGCUAAUAAUAACACCCGUUAGCAAUGUAUGCAGACAC--A--CAGACAUGAGAUUCAGGGAACAACAGAGCCACACGUCAGAAACUUCCAUCAGCCGGAUCUGCGGCACUGUAACCCUUCACCUGCAGGUAUCCACAUUUGUGGAUACCGGC-UUUU
#=GC SS_cons               :::::::::::::::::<<<<<<<<<_______>>>>>>>>>:::::::::::::::::<<<-<<_______>>->>>:::::..:::::::::::::::<<<---------------------------------<<<<<____>>>>>------->>>:::::::<<<<<<<<<<<<<__>>>>>>>>>>>>>:::::
#=GC RF                    ACGAUCgAUAuCuAUUUcauCGauCGUUuAUAUCGauCGauguGCUAAUAAUAACuuuUgucAGcAAcgUgcgCAgacAcaua..CAGAcAuGAgAUUCaGGGAACAACAGAgCCACAagUCAGAAAcUuCCaUCAGCCGgAcCUcCGGCACUGUAACCCUUUACCUGCcGGuauCCaCaUuuGuGGauaCCgGCUUUUU

AF200692.2/35693-35898     UAUUCACC
AF233272.1/74-277          UAUUCACC
X16664.4/58046-58251       UAUUCACC
U24429.1/2410-2615         UAUUCACC
AE014075.1/1225384-1225586 UAUUCACC
#=GC SS_cons               ::::::::
#=GC RF                    UAUUCACC
//