Rfam: Seed sequence alignment for RF03157

URS0001A24807_486409/1-53 Bifidobacterium animalis subsp. lactis HN019 0.0 URS0001A24807_1182713/1-53 Escherichia coli KTE126 0.0 URS0001A24807_500640/1-53 Citrobacter youngae ATCC 29220 0.0 URS0001A24807_869669/1-53 Escherichia coli 1.2741 0.0 URS0001A24807_1633494/1-53 Shigella dysenteriae 4 0.0 URS0001A24103_1116047/1-53 Escherichia coli P0299917.1 0.0 URS0001A24807_290338/1-53 Citrobacter koseri ATCC BAA-895 0.0 URS0001A24807_1080067/1-53 Citrobacter sp. S-77 0.0 URS0001A24594_1261127/1-53 Citrobacter amalonaticus Y19 0.0 URS0001A24594_1218086/1-53 Citrobacter sedlakii NBRC 105722 0.0 URS0001A24594_1274400/1-53 Enterobacter sp. Bisph2 0.0 URS0001A24594_497725/1-53 Enterobacter oryzae 0.0 URS0001A24594_1095768/1-53 Enterobacter sp. JC163 0.0 URS0001A24594_1972431/1-53 Phytobacter ursingii 0.0 URS0001A24594_1114922/1-53 Citrobacter farmeri GTC 1319 0.0 URS0001A24594_95610/1-53 Klebsiella cf. planticola B43 0.0 URS0001A24594_1274399/1-53 Enterobacter sp. Bisph1 0.0 URS0001A24594_1177180/1-53 Kosakonia radicincitans DSM 16656 0.0 URS0001A24594_1544796/1-53 Kosakonia radicincitans YD4 0.0 URS0001A24594_1451265/1-53 Citrobacter sp. JT3 0.0 URS0001A2432D_701347/1-53 Enterobacter cloacae SCF1 0.0 URS0001A2432D_12908/1-53 unclassified sequences 0.0 URS0001A2447A_12908/1-53 unclassified sequences 0.0 URS0001A2435E_12908/1-53 unclassified sequences 0.0 URS0001A236A9_1115515/1-52 Escherichia vulneris NBRC 102420 0.0 URS0001A2358E_584787/1-48 Gallaecimonas pentaromativorans 0.0 URS0001A23D4A_745411/1-48 Gallaecimonas sp. 3-C-1 0.0 URS0001A242FF_12908/1-53 unclassified sequences 0.0 URS0001A24A2D_12908/1-51 unclassified sequences 0.0 URS0001A24A2D_1547515/1-51 Pararheinheimera mesophila 0.0

CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAAUC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACC....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CCGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CCGGA.AGAGCGACGCGGCCUUAAACU....GAGGU CGCGUGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGACGCGGCCUUAUACC....GAGGU CGCGCGGUG-UCUGGC...................GUUAGg.............................G.CUGGA.AGAGCGGCGCGGCCUUAAUCA....GAGGU CGCAUGGUG-UCCGGC...................GUUAGg.............................G.CUGGA.AGAGCGAUGCGGCCUUAACU-....GAGGU CGUGUGGUGUCUGG-C...................ACUG-..............................G.ACCAG.AUGGCGACACGGCCCACU---....GAGGG CGUGUGGUGUCUGG-C...................ACUG-..............................G.ACCAG.AUGGCGACACGGCCCAAU---....GAGGU CGUAUGGUGUCUGG-C......aaa..........UUG--.......................uuu....G.ACCAG.AUAGCGAUACGGCCUAAC---....GAGGU CGUAUGGUGUCUGA-C...................AACAGuu............................G.AUCAG.AUAGCGAUACGGCCUAAC---....GAGGU CGUAUGGUGUCUGA-C...................AACAGuu............................G.AUCAG.AUAGCGAUACGGCCUAAC---....GAGGU