Rfam: Seed sequence alignment for RF03054

URS0000D6CAA5_1217694/1-65 Acinetobacter sp. CIP 64.2 0.0 URS0000D67A05_280145/1-65 Acinetobacter genomosp. 14TU 0.0 URS0000D6B108_1330039/1-65 Acinetobacter gyllenbergii MTCC 11365 0.0 URS0000D6BBEF_1217692/1-65 Acinetobacter sp. NIPH 298 0.0 URS0000D6A11B_1217649/1-59 Acinetobacter beijerinckii ANC 3835 0.0 URS0000D6AEDE_12908/1-59 unclassified sequences 0.0 URS0000D6AEDE_1217648/1-59 Acinetobacter beijerinckii CIP 110307 0.0 URS0000D66AC8_1217659/1-60 Acinetobacter haemolyticus CIP 64.3 0.0 URS0000D6B1E9_525244/1-60 Acinetobacter sp. ATCC 27244 0.0 URS0000D66817_1397525/1-59 Acinetobacter sp. COS3 0.0 URS0000D66817_1071390/1-59 Acinetobacter sp. NBRC 100985 0.0 URS0000D66817_1191460/1-59 Acinetobacter venetianus RAG-1 = CIP 110063 0.0 URS0000D6C482_40373/1-65 Acinetobacter sp. CIP-A165 0.0 URS0000D6BB97_1267512/1-54 Klebsiella pneumoniae subsp. pneumoniae B5055 0.0 URS0000D6BB97_1306950/1-54 Klebsiella pneumoniae subsp. pneumoniae 12-3578 0.0 URS0000D6BB97_1328385/1-54 Klebsiella pneumoniae BWH 30 0.0 URS0000D6BB97_1328384/1-54 Klebsiella pneumoniae BWH 28 0.0 URS0000D6BB97_1463164/1-54 Klebsiella quasipneumoniae subsp. similipneumoniae 0.0 URS0000D6BB97_1328370/1-54 Klebsiella pneumoniae MGH 32 0.0 URS0000D6BB97_1244085/1-54 Klebsiella pneumoniae CG43 0.0 URS0000D6BB97_1269006/1-54 Klebsiella pneumoniae 909957 0.0 URS0000D6BB97_1380908/1-54 Klebsiella pneumoniae JM45 0.0 URS0000D6BB97_640131/1-54 Klebsiella variicola At-22 0.0 URS0000D6BB97_1203545/1-54 Klebsiella pneumoniae subsp. pneumoniae WGLW2 0.0 URS0000D6BB97_1203547/1-54 Klebsiella pneumoniae subsp. pneumoniae WGLW5 0.0 URS0000D6BB97_1226115/1-54 Klebsiella pneumoniae subsp. pneumoniae KpQ3 0.0 URS0000D6BB97_1203544/1-54 Klebsiella pneumoniae subsp. pneumoniae WGLW1 0.0 URS0000D6BB97_665944/1-54 Klebsiella sp. 4_1_44FAA 0.0 URS0000D6BB97_749535/1-54 Klebsiella sp. MS 92-3 0.0 URS0000D6BB97_667127/1-54 Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 0.0

CGUCAGAGUAGAAGCGUUCAGC..AUAGUcaguu...................ACAUC...............................gacu.GUUA...UGC.GGGUCAUUGCUCAGAAA UGUCAGAGUAGAAGCGUUCAGC..AUAGUccguc...................ACAUC...............................gacu.GUUA...UGC.GGGUCAUUGCUCAGAAA UGUCAGAGUAGAAGCGUUCAGC..AUAGUccguc...................ACAUC...............................gacu.GCUA...UGC.GGGUCAUUGCUCAGAAA GGUCAGAGUAGAAGCGUUCAGC..AUAUAu..agu.cg...............AUU--...........................cg.aca...UAUA...UGU.GGGUCAUUGCUCAGAAA UUUCAGAGUAGAAGCGUUCAGC..AUAUAu.......................CAAAAa..................................aUAUA...UGC.GGGUCAUUGCUCAGAAA UGUCAGAGUAGAAGCGUUCAGC..AUAUAu.......................CAAAAa..................................aUAUA...UGU.GGGUCAUUGCUCAGGAA UGUCAGAGUAGAAGCGUUCAGC..AUAUAu.......................CAAAAa..................................aUAUA...UGU.GGGUCAUUGCUCAGGAA UGUCGGAGUAGAAGCGUUCAGC..AUAUAu.......................CAAAAca.................................aUAUA...UGU.GGGUCAUUGCUCAGAAA UGUCGGAGUAGAAGCGUUCAGC..AUAUAu.......................CUAAAca.................................aUAUA...UGU.GGGUCAUUGCUCAGAAA UGUCAGAGUAGAAGCGUUCAGC..AUAUAu.......................CUAAAa..................................aUAUA...UGU.GGGUCAUUGCUCAGAAA UGUCAGAGUAGAAGCGUUCAGC..AUAUAu.......................CUAAAa..................................aUAUA...UGU.GGGUCAUUGCUCAGAAA UGUCAGAGUAGAAGCGUUCAGC..AUAUAu.......................CUAAAa..................................aUAUA...UGU.GGGUCAUUGCUCAGAAA AGGCAGAGUAGAAGCGUUCAGC..AUAUAuaguu...................GAUUC...............................gac.aUAUA...UGU.GGGUCAUUGCUCAGAAA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA AGUGUGAGUAGAAGCGGUCAGU..ACGG-........................GUUAU....................................-CCA...UAC.GGGACAUUGCUCAGUCA