Rfam: Seed sequence alignment for RF02929

URS0000D69C13_1280959/1-50 Escherichia coli HVH 4 (4-7276109) 0.0 URS0000D6AF2F_766138/1-50 Shigella boydii 965-58 0.0 URS0000D6AF2F_550694/1-50 Escherichia fergusonii B253 0.0 URS0000D6AF2F_766141/1-50 Shigella boydii 5216-82 0.0 URS0000D6AF2F_358708/1-50 Shigella dysenteriae 1012 0.0 URS0000D6BC21_1169347/1-50 Escherichia coli KTE28 0.0 URS0000D68D66_1281275/1-50 Escherichia coli UMEA 3899-1 0.0 URS0000D68D66_1281000/1-50 Escherichia coli HVH 53 (4-0631051) 0.0 URS0000D68FD7_1281157/1-50 Escherichia coli KOEGE 32 (66a) 0.0 URS0000D6D1C3_1280958/1-50 Escherichia coli HVH 3 (4-7276001) 0.0 URS0000D6D1C3_1280961/1-50 Escherichia coli HVH 6 (3-8296502) 0.0 URS0000D6D1C3_1280963/1-50 Escherichia coli HVH 9 (4-6942539) 0.0 URS0000D6D1C3_1280968/1-50 Escherichia coli HVH 17 (4-7473087) 0.0 URS0000D6D1C3_1280977/1-50 Escherichia coli HVH 26 (4-5703913) 0.0 URS0000D6D1C3_1280996/1-50 Escherichia coli HVH 46 (4-2758776) 0.0 URS0000D6D1C3_1281002/1-50 Escherichia coli HVH 55 (4-2646161) 0.0 URS0000D6D1C3_1281011/1-50 Escherichia coli HVH 70 (4-2963531) 0.0 URS0000D6D1C3_1281024/1-50 Escherichia coli HVH 87 (4-5977630) 0.0 URS0000D6D1C3_1281051/1-50 Escherichia coli HVH 115 (4-4465997) 0.0 URS0000D6D1C3_1281075/1-50 Escherichia coli HVH 142 (4-5627451) 0.0 URS0000D6D1C3_1281089/1-50 Escherichia coli HVH 156 (4-3206505) 0.0 URS0000D6D1C3_1281100/1-50 Escherichia coli HVH 170 (4-3026949) 0.0 URS0000D6D1C3_1281136/1-50 Escherichia coli HVH 209 (4-3062651) 0.0 URS0000D6D1C3_1281150/1-50 Escherichia coli HVH 225 (4-1273116) 0.0 URS0000D6D1C3_1281171/1-50 Escherichia coli KOEGE 118 (317a) 0.0 URS0000D6D1C3_1281178/1-50 Escherichia coli UMEA 3053-1 0.0 URS0000D6D1C3_1281183/1-50 Escherichia coli UMEA 3108-1 0.0 URS0000D6D1C3_1281187/1-50 Escherichia coli UMEA 3122-1 0.0 URS0000D6D1C3_1281194/1-50 Escherichia coli UMEA 3151-1 0.0 URS0000D6D1C3_1281206/1-50 Escherichia coli UMEA 3176-1 0.0

ACAAAAUUGGCCG.CUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.CUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.AGGUAA ACAAAAUUGGCCG.CUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.AGGUAA ACAAAAUUGGCCG.CUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.AGGUAA ACAAAAUUGGCCG.CUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.AGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GAGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGACAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGACAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.UGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA ACAAAAUUGGCCG.UUU--...CGGUCAG.GGCCAACUAUUGCCUGAAAAA.GGGUAA