Rfam: Seed sequence alignment for RF01701

CP001037.1/7794370-7794295 Nostoc punctiforme PCC 73102 58.4 AE017126.1/556707-556642 Prochlorococcus marinus subsp. marinus str. CCMP1375 56.3 CT978603.1/2048577-2048642 Synechococcus sp. RCC307 53.1 CP002198.1/5651097-5651024 Cyanothece sp. PCC 7822 55.1 CP002198.1/5246061-5246134 Cyanothece sp. PCC 7822 55.1

UUGUGUGUG.AGGAGC.aaguuaaaaguaaAAAGCGU..UU-.--GGG..GUGGAAACACGGCAACAC.UCCC---AAGCGCUUUUUAAU UGAGAUGUG.AGGAGA..............AAGCU--..UCUcUAAAA..GUGGAAACUAGGAAACAC.UUUUUAGGA--AGCUAAAAAA UUUCGUGUG.AGGAGU.gcg..........GACGCUUc.UC-.--AGG..GUCGAAACAAGGACAGAC.UCCU---GAGCUCGUC-CGAU UGUGGUGUG.AGGAAAaaagu.........AGAGAAG..UGC.UUGGG..GUCGAAACACGGAAAGAC.UCCCAGGCACUUUUCUCAUUU UUCGGUGUG.AGGAGA.aaugu........AGAAAAG..CGU.UUGGG..GUCGAAACACGGCAAGAC.UCCCAGGCGCUUUUCUCAUUA