Rfam: Seed sequence alignment for RF01701

BA000019.2/3744859-3744787 Nostoc sp. PCC 7120 59.1 CP000878.1/1238813-1238882 Prochlorococcus marinus str. MIT 9211 52.3 CP000240.1/729361-729297 Synechococcus sp. JA-2-3B'a(2-13) 47.1 CP000435.1/979499-979563 Synechococcus sp. CC9311 59 CP000095.2/44898-44834 Prochlorococcus marinus str. NATL2A 64.8

AAUAGUGUG.AGGAGC.aaguugaaauua.AGAGCGC..UU-.--AGA..GUGGAAACACGGUAACAC.UUCU---GAGCGCUUU-UUA- GAAAACGUG.AGGAGU.u............GAGAUUC..ACU.AAGGA..GUCGAAACUAGGAAAGAC.UUCCUUGUUGAAUCUCAAAGA UGAGGAGUG.AAGAGA..............AGAAG--..CCU.CUGGG..GUCGAAACACGGACAGAC.GCCCAGGGG--UUUUUUCAUG UCAUCCGUG.AGGAGG..............GCUUC--..UUC.ACGGA..GUGGAAACAAGGAAACAC.GUCCAACGA--GAAGCCGAGA AUAACUGUG.AAGAGU.ug...........AGAUCCU..GC-.--GCA..GUGGAAACAAGGAAACAC.UUGU---GCCUGAUCUUAAAA