Rfam: Seed sequence alignment for RF01701

BA000019.2/3740217-3740143 Nostoc sp. PCC 7120 59.1 CP000806.1/4333822-4333760 Cyanothece sp. ATCC 51142 52.8 CP000095.2/386958-387022 Prochlorococcus marinus str. NATL2A 64.8 CP000435.1/785499-785563 Synechococcus sp. CC9311 59 CT971583.1/2191549-2191619 Synechococcus sp. WH 7803 52.8 AAVU01000009.1/97263-97206 Lyngbya sp. PCC 8106 47.5 CP001287.1/3572549-3572613 Cyanothece sp. PCC 8801 50

UUGUGUGUG.AGGAGC.aaguuaaaaauaaAAAGCGU..CU-.--GGG..GUGGAAACACGGCAACAC.UCCC---AGGCGCUUU-UUAA GAGAGCUUA.AAGAGU..............AAAGCAC..UU-.--GGU..GUCGAAACAAGGCAAGAC.UUCC---AGGUGCUUUUCUCA CAUUUUGUG.AGGAGU.ug...........AGAUCCU..CC-.--GUA..GUGGAAACAAGGAAACAC.UUAC---GCCUGAUCUCACGA UGAUUUGUG.AGGAGG..............GCUUC--..UUC.ACGGA..GUGGAAACUAGGAAACAC.GUCCAACUA--GAAGCCGAGA AUUCGUGUG.AGGAGU.gcu..........AAGCGCC..UCU.UCAGG..GUCGAAACAAGGACAGAC.UCCUGC-AACGCGCUUCACUU AGGUCUGU-.AGAAGA..............AGUGC--..UU-.--GGG..GUCGAAACACGGCCAGAC.UCCC---AG--GUACUUUUUC GUAAGAGUG.AUAUGA..............AAAAG--..CCU.UUGGA..GUCGAAACAUGGCAAGAC.GCCCAGAGG--CUUUUCAUUU