Rfam: Seed sequence alignment for RF01051

CP000853.1/1736753-1736673 Alkaliphilus oremlandii OhILAs 42.2 CP000821.1/3858383-3858465 Shewanella sediminis HAW-EB3 58.3 CP000885.1/1430070-1430158 Clostridium phytofermentans ISDg 76.1 CP000859.1/2080979-2081056 Desulfococcus oleovorans Hxd3 65.1 AE008691.1/706140-706227 Thermoanaerobacter tengcongensis MB4 91.1 CP000961.1/1418939-1419059 Shewanella woodyi ATCC 51908 70.3 CP001089.1/2534834-2534760 Geobacter lovleyi SZ 60 CP000924.1/1541170-1541083 Thermoanaerobacter pseudethanolicus ATCC 33223 89 CP000884.1/4023666-4023571 Delftia acidovorans SPH-1 55.7 CP001098.1/769828-769735 Halothermothrix orenii H 168 80.2 CP001124.1/2736237-2736160 Geobacter bemidjiensis Bem 65.5 CP000851.1/4449140-4449058 Shewanella pealeana ATCC 700345 76.5 CP001390.1/3356677-3356601 Geobacter sp. FRC-32 55.7

ACAAUAAAUGGGCAAACCU-.-.-.---...-.---AGGGACGCAAAGCUU..G.A-GUCUA.CGGUUAu..CUCA.............................aagaUA.AUUACGAUCGUUC.AGCUGCAUAG CUACGAUAAAGGCAAAACCG.G.G.GUA...A.CCCGGCGACGCAAAACCA..G.UGCCC--.AGGCA-...GAGA.................................-U.GCGGGGGUCGAAC.GGUUACCGAA UUAUAAAUUUAGCAAACUAA.U.U.GAA...A.GAUUAGGACGCAAAGCUA..U.GGGUCUA.AGGAUAuc.AUAA.................................UA.UCAACGAUUGCCA.GGUUACAGAA UCAUGCUAAAGCCAAACUCC.G.G.GCG...A.CCGGAGGACGGAAAGCAA..C.GGGUCUU.AA----...UAUA.................................--.---AAGACAGCCG.GGCUGCCAUG CUUCGAUAAGGGCAAACCCG.U.C.GAA...A.GGCGGGGGCGCAAAGCCA..C.GGGCCUA.AAUCCCu..GAUU.................................GG.GACAUGGUAGCCG.GGCUGCCGAA AAUGUACAAAGGCAAACCAA.U.C.GAA...A.GGUUGGGACGCAAAGCUU..C.CGGUCUA.AGGGGAu..AGUGuuugagagggucgcacucuuaacguuauuuuggUA.CCUAUGAUAGCGG.GGAUGUUACA UCACCGAAAAGGCAAAAUCC.A.G.GGG...A.CUGGAUGACGCAAAGCCA..C.CUACC--.--CGG-...---A.................................-C.CG---GGAAGAGG.GGUUACCGAA UGUUGAAAAAGGCAAACUCG.U.C.GAA...A.GGCGGGGACGCAAAGCCA..C.GGGUCUA.AAGCGAu..AGUU.................................UU.GCUAUGAUAGCCG.GGCUGCCAAC UUUGCGCACCAGCACACCCG.UaC.GAA...A.GGCGGGGUCGCAAAGCCU..C.CGGUCUA.CCCCCG...CCCU.........................uugacgggCG.GGCAUGACAGCGG.GGUUGCCAGG CUCCGGAAAUGGUAAACCCA.U.C.GAA...A.GGUGGGGACACAAAGUCA..C.GGGCCUGuAGCCGG...UUAU...........................uuuuaaCC.GGUAUGGCAGCCG.GACUGCCGAA CACACGAAAAGGCAAACCCA.G.G.GUA...A.CCUGGGGACGCAAAGCCA..C.CUGUC--.---CAG...CAUU.................................CU.G----GAAAGAGG.GGUUGUCGAA UGAUGAAAAAGGCAAAACCU.G.U.GAA...A.GCAGGUGACGCAAAGCAU..C.CAGCCUA.AGGG--...GACA.................................--.CCUAUGGCAGUGG.CGCUACCGCA UAACGAUAAUACUAAACCAU.U.C.GCG...A.GAAUGGGGCGGAAAGCCUauA.GGGUCUC.A-----...AGCA.................................--.-----GACAGCCG.GGUUGCCGAA