Rfam: Seed sequence alignment for RF01051

CP000141.1/90445-90359 Carboxydothermus hydrogenoformans Z-2901 89 AP009389.1/804550-804637 Pelotomaculum thermopropionicum SI 87.3 CP000724.1/790814-790902 Alkaliphilus metalliredigens QYMF 88.4 CP000612.1/1107064-1107147 Desulfotomaculum reducens MI-1 83.9 CP000462.1/551681-551596 Aeromonas hydrophila subsp. hydrophila ATCC 7966 83.3 CP000673.1/3897171-3897085 Clostridium kluyveri DSM 555 83.3 CP000568.1/3637613-3637528 Clostridium thermocellum ATCC 27405 84.3 AAWL01000017.1/11338-11251 Thermosinus carboxydivorans Nor1 84.1 CR555306.1/718866-718950 Aromatoleum aromaticum EbN1 81.4 CP000478.1/4546395-4546307 Syntrophobacter fumaroxidans MPOB 84 CP000482.1/3118185-3118275 Pelobacter propionicus DSM 2379 80.4 AAXG02000005.1/131709-131618 Pseudoflavonifractor capillosus ATCC 29799 77.9 AP008230.1/5220217-5220127 Desulfitobacterium hafniense Y51 77.1

UGUCGAUAAAGGCAAAACCG.G.C.GAA...A.GCCGGUGACGCAAAGCUA..CaGGGGCUA.AAGCGA...AUUU.................................UC.GCCAUGCCAGCC-.AGCUGCCGAA UUCCUAAAAGGGCAAACCAU.U.C.GAA...A.GAAUGGGACGCAAAACCU..U.GGGUCUA.AGGCAGc..AAAG.................................CU.GCUAUGAUUGCCA.GGUUGCAGGA UGUUGAUAAAGGCAAACUUA.U.U.GAA...A.AAUAAGGACGCAAAGCUA..U.GGAUCUA.AGGGAAgu.UGUA.................................UU.CCUAUGAUUGCCA.GGUUGCCGAA AAAAUUAAAAGGCAAACUUU.C.C.GAA...A.GGAAAGGACGCAAAGCCA..C.GGGCCUA.AGGACA...U---.................................UG.UCUAUGGUAGCCG.GGCCGCCUUA UAGAGUAAAGGGCAAACCGG.U.C.GAA...A.GGUCGGGACGCAAAGCCA..C.CGGUCUA.AGGGUU...CAU-.................................AA.CCUAAGACAGCGG.AGCUGCCAUC UCCGACAAAGGGCAAACUUG.C.C.GAA...A.GGUAAGGACGCAAAGCCG..A.GGGUCUA.AAGUGC...GAGA.................................GC.AUUAUGACAGUCU.GGCUGCCGUA UUUUGAAAAGGGCAAAUCUA.U.C.GAA...A.GAUAGAGACGCAAAGCCAa.C.GAGUCUA.AGGUG-...GAAA.................................-C.ACUAUGACGGUCG.GGUUGCCAAA ACAUAAGUUGGGCAAACCCG.G.C.GAA...A.GCCGGGGACGCAAAGCCA..U.GGGUCUA.AGGACAu..UGGG.................................UG.UCUAUGAUCGCCA.GGUUGCCAAU CUCUGAAAAAGGCAAACCCG.U.C.GAA...A.GGCGGGGACGCAAAAUCA..C.CGGUCUA.CAGGG-...GUCG.................................-C.CCCAUGACAGCGG.GAUUGCCAGG ACCUGUAAAGGGCAAACCAU.C.C.GAA...A.GGGUGGGACGCAAAGCCG..C.UGGCCUA.AGUCCCcc.GCGU.................................GG.GAUAUGGCAGCAG.GGUUGCCAGG GCCUGAAAAAGGCAAACCAU.U.C.GAA...A.GGAUGGGGCGCAAAACCA..C.UGGUCUA.AAUCCCg..GAAA..............................uucGG.GACAUGACAGCAG.GGCUGCCGGG GCGGGAAAAGGGCAAACCGG.C.U.GAA...A.GGCCGGGACGCAAAGCCA..G.GAGGCUA.AAGCGGag.GGAA..............................acgCC.GCCAUGCCCGUCC.GGUUGCCGCA UAAAGUCAAGGGCAAACCUG.C.C.UAA...A.GGCAGGGACGCAAAACCGu.A.GGAUCUA.AGGUGCu..UAAA...............................agGU.GCUAUGAUAGCCU.GGUUGCCAAU