Seed sequence alignment for RF00456

GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGCAAtag..................................tgaaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGCAAtag..................................ttaaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGCAAtag..................................tcaaGGAAGCAATCAgCAAGT-.ATACTGC--------- GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGCAAtag..................................t.aaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGCAAtag..................................t.aaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGCAAtag..................................t.aaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT -------TGGCAGTGTC-TTAGCTGGTTGTTGTGAGAAAtag..................................tgaaGGAAGCAATCAgCAAGT-.ATACTGCCCTA----- GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtaa..................................tgcaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtaa..................................tgcaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT -------TGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtag..................................tgcgGGAAGCAATCAgCAAGT-.ATACTGCC-------- GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTCAtaa..................................tgagGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAAT -------TGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtag..................................tgaaGGAAGCAATCAgCAAGT-.ATACTGCCCTA----- AATTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTATtag..................................ctaaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT AATTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTATtag..................................ctaaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT -TTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtag..................................caaaGGAAGCAATCAgCAGC--.ATCCTGCCCTAGAACA GCTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtag..................................cgaaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGAGTAAtag..................................ataaGGAAGCAATCAgCAAGT-.ATACTGCCCTAGAAGT ---TCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGTGGAGtga..................................g.aaCGAAGCAATCAgCAAGT-.ATACTGCCGCAGAAA- -------TGGCAGTGTC-TTAGCTGGTTGTTGTGTGGAGtga..................................g.aaCGAAGCAATCAgCAAGT-.ATACTGCCGCA----- GGTTCTCTGGCAGTGTC-TTAGCTGGTTGTTGTGTGGAGtga..................................g.aaCGAAGCAATCAgCAAGT-.ATACTGCCGCAGAAAC GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGGATGTGAtgg..................................ctgaAGAAGCAATCAgCAAGC-.ATACTGCTTCAGAAGT ---TCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGCGCAGtga..................................ttgaGGAAGCAATCAgCAAGA-.ATACTGCCCCAGA--- GTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGGCACGtta..................................tagaAGTAGCAATCAgCAAAT-.ATACTGCCCTAGAAGT

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