INFERNAL1/a [1.1.4 | Dec 2020] NAME Flavi_TBFV_xrRNA ACC RF03536 DESC Tick-borne Flavivirus exoribonuclease-resistant RNA element STATES 279 NODES 73 CLEN 90 W 115 ALPH RNA RF no CONS yes MAP yes DATE Fri Sep 11 15:26:10 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.3/viruses/flaviviruses/searches/nancy_commit/t_flavi_xrrna/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 18 EFFN 2.289551 CKSUM 178102144 NULL 0.000 0.000 0.000 0.000 GA 46.50 TC 46.50 NC 35.90 EFP7GF -9.2511 0.71894 ECMLC 0.68994 -5.32566 2.47391 1600000 260748 0.004602 ECMGC 0.45237 -14.81645 -4.29497 1600000 46682 0.008569 ECMLI 0.67552 -3.04646 4.22846 1600000 163479 0.007340 ECMGI 0.47932 -10.00784 -0.54203 1600000 37369 0.010704 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 115 146 -6.994 -8.239 -0.421 -2.047 IL 1 1 2 1 4 5 39 116 147 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 6 40 116 147 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 96 - a - - MR 3 2 3 5 3 6 39 115 146 -8.168 -0.021 -6.486 0.494 0.288 -1.001 -0.198 D 4 2 3 5 3 2 35 113 144 -7.850 -3.027 -0.196 IR 5 5 3 5 3 6 39 115 146 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 95 - a - - MR 6 5 3 8 3 6 38 114 145 -8.168 -0.021 -6.486 0.340 0.226 -0.628 -0.124 D 7 5 3 8 3 2 35 113 143 -7.850 -0.398 -2.080 IR 8 8 3 8 3 4 37 114 145 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 94 - c - - MR 9 8 3 11 3 5 37 113 144 -8.477 -0.017 -6.795 -0.112 0.853 -1.406 -0.167 D 10 8 3 11 3 1 32 111 142 -6.390 -1.568 -0.620 IR 11 11 3 11 3 4 37 113 144 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 93 - C - - MR 12 11 3 14 3 5 36 112 143 -8.477 -0.017 -6.795 -0.858 1.155 -1.237 -0.326 D 13 11 3 14 3 1 31 110 141 -6.390 -1.568 -0.620 IR 14 14 3 14 3 4 36 112 143 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 92 - A - - MR 15 14 3 17 3 5 35 111 142 -8.477 -0.017 -6.795 1.297 -0.756 -1.349 -0.841 D 16 14 3 17 3 1 30 109 140 -6.390 -1.568 -0.620 IR 17 17 3 17 3 3 35 111 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 91 - G - - MR 18 17 3 20 3 4 34 110 141 -8.477 -0.017 -6.795 -0.296 -2.000 1.357 -1.418 D 19 17 3 20 3 1 29 108 139 -6.390 -1.568 -0.620 IR 20 20 3 20 3 3 34 110 141 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 90 - A - - MR 21 20 3 23 3 4 34 109 140 -8.477 -0.017 -6.795 1.065 -1.199 -0.458 -0.427 D 22 20 3 23 3 0 28 107 138 -6.390 -1.568 -0.620 IR 23 23 3 23 3 3 33 109 140 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 89 - G - - MR 24 23 3 26 3 4 33 108 139 -8.477 -0.017 -6.795 -0.296 -2.000 1.357 -1.418 D 25 23 3 26 3 0 28 106 137 -6.390 -1.568 -0.620 IR 26 26 3 26 3 2 32 108 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 88 - U - - MR 27 26 3 29 3 3 32 107 138 -8.477 -0.017 -6.795 -0.611 -0.779 -0.738 1.113 D 28 26 3 29 3 0 27 105 136 -6.390 -1.568 -0.620 IR 29 29 3 29 3 2 31 107 138 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 87 - g - - MR 30 29 3 32 3 3 31 106 137 -8.477 -0.017 -6.795 -0.288 -1.318 0.989 -0.330 D 31 29 3 32 3 0 26 104 135 -6.390 -1.568 -0.620 IR 32 32 3 32 3 2 30 106 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 86 - u - - MR 33 32 3 35 3 3 30 105 136 -8.477 -0.017 -6.795 -0.148 0.077 -0.558 0.447 D 34 32 3 35 3 0 25 103 134 -6.390 -1.568 -0.620 IR 35 35 3 35 3 2 30 105 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 85 - U - - MR 36 35 3 38 3 2 29 104 135 -8.477 -0.017 -6.795 -0.877 -1.095 -1.160 1.345 D 37 35 3 38 3 0 24 102 133 -6.390 -1.568 -0.620 IR 38 38 3 38 3 2 29 104 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 84 - U - - MR 39 38 3 41 3 2 29 103 134 -8.477 -0.017 -6.795 -0.665 -1.137 -1.682 1.380 D 40 38 3 41 3 0 23 100 131 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 28 103 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 83 - u - - MR 42 41 3 44 3 2 28 102 133 -2.353 -0.331 -6.795 -0.193 0.159 -1.237 0.664 D 43 41 3 44 3 0 22 96 127 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 27 104 134 -0.862 -1.341 -4.180 0.000 0.000 0.000 0.000 [ MATR 15 ] - 78 - A - - MR 45 44 3 47 3 2 27 94 116 -8.428 -0.018 -6.746 1.378 -0.997 -1.391 -0.948 D 46 44 3 47 3 0 22 93 115 -6.772 -1.025 -1.001 IR 47 47 3 47 3 1 26 95 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 77 - a - - MR 48 47 3 50 3 1 26 93 115 -8.477 -0.017 -6.795 0.727 -0.538 -0.142 -0.415 D 49 47 3 50 3 0 20 91 114 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 25 94 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 76 - a - - MR 51 50 3 53 3 1 25 92 114 -8.477 -0.017 -6.795 0.748 -1.074 0.271 -0.647 D 52 50 3 53 3 0 19 90 113 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 24 93 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 75 - a - - MR 54 53 3 56 3 1 25 91 113 -8.477 -0.017 -6.795 0.501 -0.840 0.416 -0.531 D 55 53 3 56 3 0 19 90 112 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 23 92 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 74 - a - - MR 57 56 3 59 3 1 24 90 112 -8.477 -0.017 -6.795 0.687 -0.796 -0.241 -0.047 D 58 56 3 59 3 0 18 89 111 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 23 91 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 73 - a - - MR 60 59 3 62 5 1 23 89 111 -7.208 -0.164 -7.024 -3.484 -8.128 0.219 -0.629 0.087 0.173 D 61 59 3 62 5 0 17 88 110 -5.352 -0.707 -2.978 -4.409 -2.404 IR 62 62 3 62 5 1 21 90 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 1 72 A U - - MP 63 62 3 67 6 2 25 88 110 -9.103 -9.042 -0.021 -7.819 -8.098 -8.494 -3.285 -0.921 -3.359 3.048 -3.743 -4.499 0.321 -3.576 -3.344 1.497 -3.880 -0.172 0.057 -3.689 -1.514 -2.312 ML 64 62 3 67 6 1 19 87 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 19 87 109 -7.560 -6.289 -0.874 -6.268 -1.401 -4.481 0.345 -0.839 0.418 -0.259 D 66 62 3 67 6 0 14 84 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 20 88 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 21 88 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 2 71 g c - - MP 69 68 6 73 6 2 24 86 108 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -2.614 -2.497 -2.730 0.954 -1.668 -3.548 1.804 -2.857 -2.777 1.841 -3.304 -0.056 1.796 -2.851 -0.239 -1.773 ML 70 68 6 73 6 1 18 85 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 18 85 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 13 82 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 20 86 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 20 86 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 3 70 g c - - MP 75 74 6 79 6 2 22 84 106 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -3.327 -2.427 -3.344 1.387 -3.770 -4.037 0.492 -3.753 -1.848 2.989 -3.885 0.332 0.224 -3.344 -1.393 -2.351 ML 76 74 6 79 6 1 18 83 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 17 83 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 13 80 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 19 84 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 19 84 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 4 69 G C - - MP 81 80 6 85 6 2 21 82 104 -9.163 -9.102 -0.087 -4.350 -8.158 -8.553 -3.721 -2.552 -3.716 1.429 -4.385 -4.422 0.138 -4.109 -3.762 3.067 -4.168 0.841 -0.136 -3.737 -1.823 -2.634 ML 82 80 6 85 6 1 17 81 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 17 81 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 13 78 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 18 82 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 18 82 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 5 68 c g - - MP 87 86 6 91 6 2 19 80 102 -9.097 -9.036 -0.021 -7.812 -8.092 -8.487 -1.379 -2.180 -2.346 1.063 -2.169 -3.167 1.911 -2.568 -2.400 1.665 -2.939 -0.469 1.598 -2.469 -0.138 -0.960 ML 88 86 6 91 6 1 17 79 101 -6.945 -7.291 -0.664 -1.700 -7.141 -4.670 1.134 -1.016 -0.763 -0.472 MR 89 86 6 91 6 1 16 79 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 12 76 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 17 80 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 17 80 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 6 67 g c - - MP 93 92 6 97 6 2 17 78 100 -9.163 -9.102 -0.053 -7.878 -5.289 -8.553 -3.160 -2.474 -3.183 1.528 -3.220 -3.940 1.577 -3.440 -3.310 2.501 -3.754 0.045 0.776 -3.227 -0.851 -2.159 ML 94 92 6 97 6 1 15 77 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 14 77 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 12 75 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 16 78 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 16 78 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 7 66 c g - - MP 99 98 6 103 4 2 15 76 98 -6.919 -8.165 -0.447 -1.973 -2.071 -1.469 -2.237 1.138 -2.073 -3.066 1.928 -2.473 -2.285 1.338 -1.756 -0.495 1.763 -2.368 -0.093 -1.395 ML 100 98 6 103 4 1 14 76 98 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 13 75 97 -4.773 -13.200 -1.062 -1.046 0.096 -0.782 0.591 -0.246 D 102 98 6 103 4 0 11 74 96 -12.737 -14.007 -2.036 -0.404 IL 103 103 5 103 4 1 15 76 98 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 16 76 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 65 - g - - MR 105 104 6 107 5 1 16 75 97 -6.838 -0.375 -2.271 -6.866 -7.758 -0.233 -0.848 0.432 0.315 D 106 104 6 107 5 0 11 73 95 -6.506 -0.481 -2.586 -5.563 -3.557 IR 107 107 3 107 5 1 14 75 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 8 64 g c - - MP 108 107 3 112 6 2 18 74 96 -9.015 -8.955 -0.023 -7.731 -8.011 -8.406 -2.959 -0.815 -3.008 1.292 -3.204 -3.718 1.116 -3.351 -3.123 2.740 -3.562 -0.108 0.660 -3.031 -0.921 -2.041 ML 109 107 3 112 6 1 13 72 94 -7.477 -7.823 -0.425 -2.232 -7.673 -5.202 1.106 -0.765 -0.926 -0.449 MR 110 107 3 112 6 1 11 72 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 7 69 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 13 73 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 13 73 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 9 63 c g - - MP 114 113 6 118 6 2 17 72 94 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -1.730 -0.579 -1.461 1.292 -1.876 -2.752 1.793 -2.238 -1.484 1.344 -2.540 -0.397 1.293 -2.047 0.199 -1.148 ML 115 113 6 118 6 1 11 70 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 11 70 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 7 67 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 12 71 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 13 71 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 10 62 u a - - MP 120 119 6 124 6 2 16 70 92 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -1.354 -1.964 -1.979 1.188 -1.030 -2.827 1.582 -2.263 -1.390 1.000 -2.601 -0.522 2.030 -2.121 -0.008 -1.194 ML 121 119 6 124 6 1 11 68 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 10 68 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 6 66 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 12 69 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 12 69 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 11 61 g c - - MP 126 125 6 130 6 2 14 68 90 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -3.379 -2.471 -3.360 1.480 -3.632 -4.066 1.146 -3.709 -3.524 2.821 -3.928 0.066 0.482 -3.357 -1.170 -2.325 ML 127 125 6 130 6 1 10 66 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 9 66 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 6 64 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 11 67 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 11 67 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 12 60 c g - - MP 132 131 6 136 6 2 13 66 88 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -3.754 -3.725 -3.632 0.008 -2.561 -4.198 2.922 -3.278 -3.642 0.211 -4.031 -1.736 1.449 -3.896 1.193 -2.519 ML 133 131 6 136 6 1 9 65 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 8 64 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 6 63 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 10 65 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 10 65 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 13 59 G C - - MP 138 137 6 142 4 2 11 64 86 -7.088 -7.295 -0.048 -5.710 -5.002 -3.219 -5.129 0.024 -5.597 -4.793 -0.897 -5.387 -4.493 3.695 -4.812 -0.929 -1.276 -4.637 -2.949 -4.002 ML 139 137 6 142 4 1 8 64 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 7 63 85 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 5 62 84 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 10 65 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 9 64 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 14 - G - - - ML 144 143 6 146 3 1 9 62 83 -8.095 -0.019 -6.749 -1.858 -3.120 1.780 -2.507 D 145 143 6 146 3 0 5 60 82 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 9 63 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 15 - C - - - ML 147 146 3 149 3 1 8 60 82 -8.095 -0.019 -6.749 -2.063 1.700 -2.893 -1.412 D 148 146 3 149 3 0 4 59 81 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 8 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 16 - A - - - ML 150 149 3 152 3 1 7 59 81 -8.095 -0.019 -6.749 1.770 -2.637 -2.243 -2.206 D 151 149 3 152 3 0 4 58 80 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 7 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 17 - g - - - ML 153 152 3 155 3 1 6 58 80 -8.095 -0.019 -6.749 0.173 -1.204 0.895 -0.787 D 154 152 3 155 3 0 3 57 79 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 6 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 18 - C - - - ML 156 155 3 158 3 1 5 57 79 -8.095 -0.019 -6.749 -1.307 1.463 -1.785 -0.865 D 157 155 3 158 3 0 3 56 78 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 5 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 19 - a - - - ML 159 158 3 161 3 1 4 56 78 -8.477 -0.017 -6.795 0.982 -1.507 0.203 -0.939 D 160 158 3 161 3 0 3 55 77 -5.620 -0.734 -1.403 IL 161 161 3 161 3 1 4 57 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 58 - A - - MR 162 161 3 164 2 1 3 55 77 -8.513 -0.004 1.468 -1.217 -1.523 -1.136 D 163 161 3 164 2 0 2 55 77 -4.432 -0.068 IR 164 164 3 164 2 1 3 56 78 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 42 ] - - - - - - B 165 164 3 166 213 0 2 54 76 [ BEGL 43 ] - - - - - - S 166 165 1 167 4 0 0 33 55 -0.042 -6.906 -6.313 -6.954 [ MATP 44 ] 20 36 C G - - MP 167 166 1 171 6 2 2 33 55 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -4.838 -4.769 -4.479 -0.977 -3.136 -4.852 3.631 -3.975 -4.539 -0.774 -4.767 -2.721 0.347 -4.888 -0.851 -3.369 ML 168 166 1 171 6 1 1 31 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 1 171 6 1 1 31 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 1 171 6 0 0 29 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 1 33 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 32 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 21 35 g c - - MP 173 172 6 177 6 2 2 31 53 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -3.573 -2.542 -3.608 2.399 -4.103 -4.546 0.306 -3.880 -3.596 2.668 -4.069 -0.132 0.006 -3.790 -1.644 -2.494 ML 174 172 6 177 6 1 1 29 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 6 1 1 29 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 176 172 6 177 6 0 0 27 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 177 177 5 177 6 1 1 31 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 178 178 6 178 5 1 1 30 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 22 34 C G - - MP 179 178 6 183 6 2 2 29 51 -9.163 -9.102 -0.149 -3.963 -5.159 -8.553 -4.838 -4.769 -4.479 -0.977 -3.136 -4.852 3.631 -3.975 -4.539 -0.774 -4.767 -2.721 0.347 -4.888 -0.851 -3.369 ML 180 178 6 183 6 1 1 28 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 181 178 6 183 6 1 1 27 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 6 183 6 0 0 25 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 29 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 28 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 23 33 c g - - MP 185 184 6 189 6 2 2 27 49 -9.036 -8.975 -0.022 -7.751 -8.031 -8.426 -2.553 -1.745 -2.709 0.626 -2.507 -2.137 2.918 -2.928 -2.749 0.947 -3.249 -0.835 0.915 -2.834 -0.520 -1.857 ML 186 184 6 189 6 1 1 26 48 -7.120 -7.466 -2.180 -0.463 -7.316 -4.845 0.143 -1.023 0.730 -0.424 MR 187 184 6 189 6 1 1 26 47 -7.359 -6.088 -1.997 -6.067 -0.594 -4.280 0.930 -0.798 -0.536 -0.268 D 188 184 6 189 6 0 0 24 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 27 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 26 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 24 32 a u - - MP 191 190 6 195 4 2 2 25 47 -6.751 -6.958 -0.061 -5.372 -3.016 -0.795 -3.105 2.762 -3.382 -4.140 0.652 -3.339 -3.104 1.739 -3.629 -0.048 0.380 -3.364 -1.177 -2.083 ML 192 190 6 195 4 1 1 24 46 -4.451 -4.633 -0.912 -1.387 0.933 -0.946 -0.317 -0.379 MR 193 190 6 195 4 1 1 24 46 -5.230 -4.259 -2.127 -0.531 -0.041 0.438 -0.740 0.104 D 194 190 6 195 4 0 0 23 45 -4.568 -4.250 -2.265 -0.520 IL 195 195 5 195 4 1 1 26 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 196 196 6 196 3 1 1 25 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 25 - u - - - ML 197 196 6 199 3 1 1 23 45 -7.844 -0.114 -3.801 -0.216 -0.399 0.063 0.418 D 198 196 6 199 3 0 0 20 42 -7.564 -3.077 -0.191 IL 199 199 3 199 3 1 1 24 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 26 - u - - - ML 200 199 3 202 3 1 1 22 44 -7.753 -0.145 -3.454 -0.324 -0.763 -0.249 0.824 D 201 199 3 202 3 0 0 19 41 -7.823 -3.336 -0.158 IL 202 202 3 202 3 1 1 24 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 27 - a - - - ML 203 202 3 205 3 1 1 21 43 -2.017 -0.434 -6.288 0.433 -0.664 0.247 -0.265 D 204 202 3 205 3 0 0 15 37 -8.089 -1.474 -0.652 IL 205 205 3 205 3 1 1 22 43 -1.216 -0.890 -5.063 0.000 0.000 0.000 0.000 [ MATL 52 ] 30 - a - - - ML 206 205 3 208 3 1 1 13 32 -7.826 -0.023 -6.480 0.484 -0.122 -0.708 0.098 D 207 205 3 208 3 0 0 12 31 -7.620 -1.625 -0.576 IL 208 208 3 208 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 31 - a - - - ML 209 208 3 211 2 1 1 1 1 * 0.000 0.505 -0.669 -0.070 -0.001 D 210 208 3 211 2 0 0 0 0 * 0.000 IL 211 211 3 211 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 54 ] - - - - - - E 212 211 3 -1 0 0 0 0 0 [ BEGR 55 ] - - - - - - S 213 165 1 214 3 0 0 35 54 -8.095 -0.019 -6.749 IL 214 214 2 214 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 37 - A - - - ML 215 214 2 217 5 1 1 35 54 -7.208 -0.036 -7.024 -7.236 -8.128 1.770 -2.637 -2.243 -2.206 D 216 214 2 217 5 0 0 34 53 -4.959 -0.803 -4.221 -2.596 -2.508 IL 217 217 3 217 5 1 1 36 55 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 38 57 C G - - MP 218 217 3 222 6 2 2 34 53 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -4.741 -4.729 -4.624 -1.218 -3.696 -2.460 3.717 -4.487 -4.725 -0.971 -5.008 -2.889 -0.256 -4.923 -1.574 -3.674 ML 219 217 3 222 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 220 217 3 222 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 221 217 3 222 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 222 222 5 222 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 223 223 6 223 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 39 56 G C - - MP 224 223 6 228 6 2 2 32 51 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -5.002 -3.219 -5.129 0.024 -5.597 -4.793 -0.897 -5.387 -4.493 3.695 -4.812 -0.929 -1.276 -4.637 -2.949 -4.002 ML 225 223 6 228 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 226 223 6 228 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 227 223 6 228 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 228 228 5 228 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 229 229 6 229 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 40 55 G C - - MP 230 229 6 234 6 2 2 30 49 -9.163 -9.102 -0.020 -7.878 -8.158 -8.553 -5.002 -3.219 -5.129 0.024 -5.597 -4.793 -0.897 -5.387 -4.493 3.695 -4.812 -0.929 -1.276 -4.637 -2.949 -4.002 ML 231 229 6 234 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 232 229 6 234 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 233 229 6 234 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 234 234 5 234 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 235 235 6 235 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 41 54 G C - - MP 236 235 6 240 6 2 2 28 47 -9.163 -9.102 -0.063 -7.878 -4.942 -8.553 -5.002 -3.219 -5.129 0.024 -5.597 -4.793 -0.897 -5.387 -4.493 3.695 -4.812 -0.929 -1.276 -4.637 -2.949 -4.002 ML 237 235 6 240 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 238 235 6 240 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 239 235 6 240 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 240 240 5 240 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 241 241 6 241 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 42 53 a u - - MP 242 241 6 246 4 2 2 26 45 -6.981 -7.188 -0.052 -5.602 -2.070 -0.817 -2.259 1.940 -2.327 -3.051 1.137 -2.571 -0.325 1.577 -2.787 0.373 0.950 -2.379 -0.432 -1.423 ML 243 241 6 246 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 244 241 6 246 4 1 1 26 45 -5.296 -4.325 -0.985 -1.253 -0.091 0.513 -0.795 0.081 D 245 241 6 246 4 0 0 25 45 -4.568 -4.250 -2.265 -0.520 IL 246 246 5 246 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 247 247 6 247 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 43 - A - - - ML 248 247 6 250 3 1 1 23 42 -8.095 -0.019 -6.749 1.606 -2.079 -1.341 -1.624 D 249 247 6 250 3 0 0 22 41 -6.174 -1.687 -0.566 IL 250 250 3 250 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 44 - a - - - ML 251 250 3 253 3 1 1 22 41 -8.095 -0.019 -6.749 0.582 -0.866 0.129 -0.216 D 252 250 3 253 3 0 0 21 40 -6.174 -1.687 -0.566 IL 253 253 3 253 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 45 - a - - - ML 254 253 3 256 3 1 1 21 40 -8.095 -0.019 -6.749 0.536 -0.434 -0.453 0.109 D 255 253 3 256 3 0 0 20 39 -6.174 -1.687 -0.566 IL 256 256 3 256 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 46 - U - - - ML 257 256 3 259 3 1 1 20 39 -8.095 -0.019 -6.749 -0.239 -0.918 -1.063 1.101 D 258 256 3 259 3 0 0 19 38 -6.174 -1.687 -0.566 IL 259 259 3 259 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 47 - G - - - ML 260 259 3 262 3 1 1 19 37 -8.095 -0.019 -6.749 -0.986 -2.485 1.608 -1.899 D 261 259 3 262 3 0 0 18 37 -6.174 -1.687 -0.566 IL 262 262 3 262 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 48 - G - - - ML 263 262 3 265 3 1 1 17 36 -8.095 -0.019 -6.749 -1.026 -2.514 1.619 -1.927 D 264 262 3 265 3 0 0 17 36 -6.174 -1.687 -0.566 IL 265 265 3 265 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 49 - U - - - ML 266 265 3 268 3 1 1 16 35 -8.095 -0.019 -6.749 -1.732 -1.685 -2.477 1.682 D 267 265 3 268 3 0 0 16 34 -6.174 -1.687 -0.566 IL 268 268 3 268 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 50 - C - - - ML 269 268 3 271 3 1 1 15 33 -8.095 -0.019 -6.749 -2.063 1.700 -2.893 -1.412 D 270 268 3 271 3 0 0 15 33 -6.174 -1.687 -0.566 IL 271 271 3 271 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 51 - G - - - ML 272 271 3 274 3 1 1 13 31 -8.095 -0.019 -6.749 -1.143 -2.601 1.648 -2.012 D 273 271 3 274 3 0 0 13 32 -6.174 -1.687 -0.566 IL 274 274 3 274 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 52 - c - - - ML 275 274 3 277 2 1 1 1 1 * 0.000 0.003 0.773 -1.348 -0.157 D 276 274 3 277 2 0 0 0 0 * 0.000 IL 277 277 3 277 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 278 277 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Flavi_TBFV_xrRNA ACC RF03536 DESC Tick-borne Flavivirus exoribonuclease-resistant RNA element LENG 90 MAXL 173 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Sep 11 15:26:10 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 18 EFFN 4.223145 CKSUM 178102144 STATS LOCAL MSV -8.6013 0.71894 STATS LOCAL VITERBI -10.0140 0.71894 STATS LOCAL FORWARD -3.8643 0.71894 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.44620 1.34829 1.19500 1.59876 1.38629 1.38629 1.38629 1.38629 0.15899 4.32505 2.01170 1.46634 0.26236 0.00000 * 1 0.28183 3.15683 1.88993 2.95740 1 A - - ( 1.38629 1.38629 1.38629 1.38629 0.03055 4.19662 4.19662 1.46634 0.26236 0.18053 1.80074 2 2.00004 1.41227 1.16223 1.17671 2 g - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 3 1.69376 2.64017 0.41308 2.48632 3 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 4 1.68124 2.88218 0.36808 2.72140 4 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 5 1.55314 1.33974 1.43300 1.24510 5 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 6 1.53160 1.63886 0.77600 2.04512 6 g - - ( 1.38629 1.38629 1.38629 1.38629 0.09653 4.32505 2.54109 1.46634 0.26236 1.09861 0.40547 7 1.68077 1.27208 1.54934 1.13590 7 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02873 4.25726 4.25726 1.46634 0.26236 0.28964 1.38045 8 1.14808 2.01106 0.87309 2.03065 8 g - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 9 1.36748 1.33366 1.50775 1.34580 9 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 10 1.59985 1.49193 1.65299 0.96323 10 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 11 1.58779 2.00415 0.58521 2.26473 11 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 12 2.94172 0.59421 2.74339 1.10602 12 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 13 3.04611 3.91288 0.09312 3.84497 13 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 14 3.40772 4.36472 0.06794 3.91941 14 G - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 15 3.70411 0.08762 4.24191 3.10349 15 C - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 16 0.07173 3.96634 3.62742 3.74255 16 A - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 17 1.32977 2.42468 0.60941 2.27028 17 G - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 18 2.99442 0.19151 3.04541 2.56851 18 C - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 19 0.60009 2.86059 1.16553 2.49804 19 A - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 20 4.00320 0.10926 3.85067 2.74913 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 21 0.85108 2.94516 0.77929 2.78512 21 g - - < 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 22 3.98102 0.11032 3.83824 2.74488 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.10445 4.32505 2.45404 1.46634 0.26236 1.09861 0.40547 23 2.00524 0.63765 1.76654 1.79627 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.02896 4.24956 4.24956 1.46634 0.26236 2.13946 0.12524 24 0.44383 2.65873 1.59623 2.45654 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.18866 4.24956 1.84731 1.46634 0.26236 2.13946 0.12524 25 1.66553 1.68461 1.24806 1.08373 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.12312 4.09479 2.31082 1.46634 0.26236 2.92009 0.05544 26 1.79746 2.09923 1.55516 0.69200 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.15891 4.00866 2.04971 1.46634 0.26236 3.15684 0.04349 27 1.07892 1.90834 1.10488 1.71225 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.49371 0.99634 3.89144 0.73196 0.65578 0.98512 0.46744 28 1.00806 1.42654 1.95762 1.37143 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03447 4.07803 4.07803 1.46634 0.26236 1.10146 0.40405 29 1.00704 1.91668 1.39160 1.43158 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.27334 4.16704 1.49761 1.46634 0.26236 0.15361 1.94914 30 2.69126 1.55875 2.49151 0.44782 32 U - - > 1.38629 1.38629 1.38629 1.38629 0.03272 4.12935 4.12935 1.46634 0.26236 2.79922 0.06279 31 1.87017 1.96895 0.55857 2.00789 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.03272 4.12935 4.12935 1.46634 0.26236 0.12978 2.10607 32 3.02146 3.99146 0.09527 3.74339 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 33 3.01052 0.87043 2.74508 0.75988 35 u - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 34 3.01439 3.97972 0.09623 3.73053 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 35 0.07173 3.96634 3.62742 3.74255 37 A - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 36 4.41094 0.06153 4.26400 3.39730 38 C - - < 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 37 3.07705 3.95913 0.08913 3.90730 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 38 3.07358 3.95390 0.08957 3.90020 40 G - - < 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 39 3.07116 3.95026 0.08988 3.89528 41 G - - < 1.38629 1.38629 1.38629 1.38629 0.11951 4.32505 2.30852 1.46634 0.26236 1.09861 0.40547 40 0.95285 2.08413 1.08680 1.87961 42 a - - < 1.38629 1.38629 1.38629 1.38629 0.02939 4.23493 4.23493 1.46634 0.26236 0.23605 1.55943 41 0.16899 3.35537 2.57143 3.11998 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 42 0.94725 2.09889 1.22572 1.62936 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 43 0.97336 1.70581 1.72143 1.34035 45 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 44 1.66829 2.29067 2.29950 0.49442 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 45 2.41620 3.70581 0.16228 3.32551 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 46 2.45689 3.73434 0.15617 3.35240 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 47 3.31036 3.16195 3.84775 0.10555 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 48 3.70411 0.08762 4.24191 3.10349 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 49 2.57780 3.81929 0.13950 3.43188 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 50 1.44880 0.69034 2.64345 1.64699 52 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 51 1.63341 1.48246 1.89283 0.85094 53 u - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 52 4.05479 0.10882 3.80559 2.75634 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 53 4.06261 0.10847 3.80951 2.75775 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 54 4.07309 0.10801 3.81474 2.75964 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 55 3.64036 3.83387 0.06441 4.23298 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 56 0.24545 2.40106 2.88045 2.64623 58 A - - , 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 57 4.00499 0.11110 3.78026 2.74710 59 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 58 1.80384 2.91748 0.33432 2.72659 60 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 59 2.52575 0.68496 1.87793 1.33567 61 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 60 0.96502 1.89691 1.38883 1.51582 62 a - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 61 1.58578 1.50824 1.08199 1.44820 63 g - - ) 1.38629 1.38629 1.38629 1.38629 0.37756 4.32505 1.19986 1.46634 0.26236 1.09861 0.40547 62 2.29721 0.66051 1.84325 1.49357 64 C - - ) 1.38629 1.38629 1.38629 1.38629 0.52398 3.98537 0.94352 1.46634 0.26236 0.32959 1.27017 63 1.70510 2.14404 0.95385 1.15261 65 g - - - 1.38629 1.38629 1.38629 1.38629 0.04027 3.92537 3.92537 1.46634 0.26236 0.07439 2.63538 64 1.30271 1.71840 1.05856 1.59999 66 g - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 65 2.29459 0.90004 1.52641 1.28979 67 c - - ) 1.38629 1.38629 1.38629 1.38629 0.17367 4.32505 1.92280 1.46634 0.26236 1.09861 0.40547 66 1.36855 1.51663 1.14600 1.56942 68 g - - ) 1.38629 1.38629 1.38629 1.38629 0.03100 4.18238 4.18238 1.46634 0.26236 0.16639 1.87549 67 2.92135 0.56543 2.67148 1.17482 69 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 68 2.44849 0.57313 2.42506 1.34190 70 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 69 1.27460 1.37229 1.31723 1.61417 71 a - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 70 2.65156 1.92066 2.43111 0.36383 72 U - - ) 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 71 1.24891 1.88887 1.25636 1.28283 73 a - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 72 0.85272 2.04105 1.54673 1.46572 74 a - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 73 1.01844 2.06440 0.97537 2.00325 75 g - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 74 0.79951 2.31239 1.10254 2.12528 76 a - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 75 0.81165 1.77317 1.45597 1.87791 77 a - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 76 0.30010 2.20119 2.75053 2.46877 78 A - - : 1.38629 1.38629 1.38629 1.38629 0.34303 1.28320 4.32505 1.10527 0.40215 1.09861 0.40547 77 1.61375 1.18732 2.47308 0.88796 83 u - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 78 2.10899 2.56475 3.01277 0.28429 84 U - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 79 2.43740 2.52908 2.39984 0.29821 85 U - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 80 1.57342 1.26188 1.78421 1.07407 86 u - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 81 1.76462 2.60014 0.54455 1.74651 87 G - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 82 2.11189 2.12983 1.96740 0.47753 88 U - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 83 1.74131 3.25588 0.31405 2.88818 89 G - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 84 0.54571 2.46321 1.74412 1.82878 90 A - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 85 1.74131 3.25588 0.31405 2.88818 91 G - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 86 0.35491 1.97210 2.70913 2.37509 92 A - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 87 2.42340 0.39755 2.46774 1.86667 93 C - - : 1.38629 1.38629 1.38629 1.38629 0.02682 4.32505 4.32505 1.46634 0.26236 1.09861 0.40547 88 1.55902 0.63044 2.70466 1.65859 94 C - - : 1.38629 1.38629 1.38629 1.38629 0.34303 4.32505 1.28320 1.46634 0.26236 1.09861 0.40547 89 1.13476 1.12450 1.88560 1.59976 95 c - - : 1.38629 1.38629 1.38629 1.38629 0.03662 4.01864 4.01864 1.46634 0.26236 3.13305 0.04456 90 0.99305 1.06221 2.29644 1.69692 96 a - - : 1.38629 1.38629 1.38629 1.38629 0.62948 0.76115 * 0.07662 2.60702 0.00000 * //