INFERNAL1/a [1.1.4 | Dec 2020] NAME SAM-I-IV-variant ACC RF01725 DESC SAM-I/IV variant riboswitch STATES 311 NODES 85 CLEN 99 W 183 ALPH RNA RF no CONS yes MAP yes DATE Sun Oct 23 23:23:03 2022 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/3Dfams/3Dreview/RF01725/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 417 EFFN 5.627998 CKSUM 4172824510 NULL 0.000 0.000 0.000 0.000 GA 41.10 TC 41.10 NC 41.00 EFP7GF -12.9062 0.71843 ECMLC 0.53932 -8.69959 1.55015 1600000 301926 0.003974 ECMGC 0.36317 -16.41460 -5.36479 1600000 22123 0.018081 ECMLI 0.50816 -5.68665 4.36915 1600000 198805 0.006036 ECMGI 0.42996 -7.77688 1.47430 1600000 21356 0.018730 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 183 271 -7.984 -8.191 -0.100 -4.066 IL 1 1 2 1 4 21 54 185 273 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 21 53 185 273 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 22 53 183 271 -8.876 -0.011 -7.530 0.552 -0.619 -0.439 0.196 D 4 2 3 5 3 17 48 180 268 -7.077 -2.590 -0.275 IL 5 5 3 5 3 20 52 184 272 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 21 52 182 270 -8.876 -0.011 -7.530 0.435 -0.322 -0.700 0.302 D 7 5 3 8 3 16 47 179 267 -7.077 -2.590 -0.275 IL 8 8 3 8 3 20 52 183 271 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 20 51 181 269 -8.876 -0.011 -7.530 0.322 -0.326 -0.384 0.247 D 10 8 3 11 3 16 47 179 266 -7.077 -2.453 -0.304 IL 11 11 3 11 3 20 51 182 270 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 19 50 180 268 -8.878 -0.011 -7.533 0.436 -0.201 -0.517 0.108 D 13 11 3 14 3 16 46 178 266 -7.053 -2.566 -0.280 IL 14 14 3 14 3 19 50 181 269 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 18 50 180 267 -9.224 -0.221 -2.834 0.642 -0.868 -0.862 0.424 D 16 14 3 17 3 16 46 178 265 -6.215 -1.282 -0.797 IL 17 17 3 17 3 19 51 180 268 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 332 - a - - MR 18 17 3 20 3 20 51 179 266 -9.018 -0.012 -7.336 0.417 -0.332 -0.235 0.030 D 19 17 3 20 3 15 45 176 264 -8.290 -1.314 -0.750 IR 20 20 3 20 3 19 50 179 267 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 331 - a - - MR 21 20 3 23 3 20 50 178 265 -9.140 -0.013 -7.151 0.424 -0.141 -0.801 0.236 D 22 20 3 23 3 14 44 175 263 -7.751 -1.456 -0.665 IR 23 23 3 23 3 18 49 178 266 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 330 - a - - MR 24 23 3 26 3 20 49 177 264 -9.197 -0.010 -7.515 0.516 -0.288 -0.608 0.130 D 25 23 3 26 3 14 43 174 261 -7.382 -2.130 -0.385 IR 26 26 3 26 3 18 48 177 265 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 329 - u - - MR 27 26 3 29 3 19 48 176 263 -9.208 -0.013 -7.075 0.084 0.128 -0.448 0.156 D 28 26 3 29 3 14 43 173 260 -7.295 -2.053 -0.410 IR 29 29 3 29 3 17 47 176 264 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 328 - u - - MR 30 29 3 32 3 19 47 175 262 -9.216 -0.010 -7.534 -0.110 -0.119 -0.560 0.560 D 31 29 3 32 3 13 42 172 259 -7.229 -2.406 -0.313 IR 32 32 3 32 3 17 47 175 263 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 327 - g - - MR 33 32 3 35 3 18 47 174 261 -9.216 -0.010 -7.534 -0.155 -0.327 0.431 -0.064 D 34 32 3 35 3 13 42 171 258 -7.229 -1.924 -0.454 IR 35 35 3 35 3 17 46 174 262 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 326 - a - - MR 36 35 3 38 3 18 46 173 260 -9.229 -0.010 -7.547 0.380 -0.244 -0.133 -0.086 D 37 35 3 38 3 13 41 170 257 -7.116 -2.179 -0.373 IR 38 38 3 38 3 16 45 173 261 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 325 - g - - MR 39 38 3 41 3 17 45 172 259 -9.232 -0.012 -7.230 -0.186 -0.776 0.579 0.062 D 40 38 3 41 3 12 41 169 257 -7.092 -2.269 -0.349 IR 41 41 3 41 3 16 44 172 260 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 324 - g - - MR 42 41 3 44 3 16 44 171 258 -9.230 -0.010 -7.547 0.117 -0.465 0.146 0.117 D 43 41 3 44 3 12 40 168 256 -7.109 -2.203 -0.367 IR 44 44 3 44 3 16 44 171 259 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 323 - a - - MR 45 44 3 47 3 15 43 170 257 -9.232 -0.013 -7.098 0.735 -0.954 -0.364 0.059 D 46 44 3 47 3 12 40 168 255 -7.092 -2.269 -0.349 IR 47 47 3 47 3 15 43 170 258 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 322 - A - - MR 48 47 3 50 3 14 42 169 256 -9.229 -0.016 -6.693 1.130 -1.090 -0.792 -0.387 D 49 47 3 50 3 12 40 167 255 -7.118 -0.895 -1.136 IR 50 50 3 50 3 14 42 169 257 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 321 - a - - MR 51 50 3 53 3 13 41 168 255 -9.274 -0.029 -5.755 0.897 -0.929 -0.890 0.102 D 52 50 3 53 3 11 39 166 254 -6.615 -1.535 -0.633 IR 53 53 3 53 3 13 41 168 256 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 320 - a - - MR 54 53 3 56 3 13 40 167 255 -9.261 -0.203 -2.945 0.426 0.006 -0.793 0.105 D 55 53 3 56 3 11 38 165 253 -6.783 -1.262 -0.801 IR 56 56 3 56 3 13 40 167 255 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 319 - a - - MR 57 56 3 59 3 12 39 166 254 -2.232 -0.356 -7.408 0.545 -0.049 -0.894 0.051 D 58 56 3 59 3 10 38 165 252 -2.499 -0.737 -2.163 IR 59 59 3 59 3 12 39 166 254 -2.711 -0.278 -5.467 0.000 0.000 0.000 0.000 [ MATR 20 ] - 315 - A - - MR 60 59 3 62 3 11 38 165 252 -9.287 -0.010 -7.604 1.929 -4.250 -3.729 -3.961 D 61 59 3 62 3 9 36 163 251 -6.433 -1.610 -0.597 IR 62 62 3 62 3 11 38 165 253 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 314 - A - - MR 63 62 3 65 2 10 37 164 251 -9.472 -0.002 1.799 -2.227 -2.788 -2.620 D 64 62 3 65 2 9 36 163 250 -4.477 -0.066 IR 65 65 3 65 2 10 37 164 252 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 22 ] - - - - - - B 66 65 3 109 67 9 36 163 250 [ BEGR 74 ] - - - - - - S 67 66 1 68 3 0 0 62 118 -8.946 -0.010 -7.600 IL 68 68 2 68 3 1 1 64 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 202 - G - - - ML 69 68 2 71 5 1 1 62 118 -7.982 -0.024 -7.797 -8.009 -8.000 -2.948 -4.429 1.904 -3.606 D 70 68 2 71 5 0 0 60 117 -4.959 -0.803 -4.221 -2.596 -2.508 IL 71 71 3 71 5 1 1 62 118 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 76 ] 203 313 G C - - MP 72 71 3 76 6 2 2 61 117 -9.592 -9.531 -0.015 -8.308 -8.588 -8.983 -3.853 -2.722 -3.740 1.054 -4.275 -4.378 1.193 -4.224 -4.057 3.081 -4.095 -0.317 0.272 -3.385 -1.529 -2.695 ML 73 71 3 76 6 1 1 59 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 1 59 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 0 55 111 -9.087 -7.785 -3.582 -4.264 -4.282 -0.310 IL 76 76 5 76 6 1 1 60 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 60 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 77 ] 204 312 c g - - MP 78 77 6 82 6 2 2 59 115 -9.592 -9.531 -0.021 -8.308 -7.587 -8.072 -3.454 -3.354 -3.539 0.715 -2.815 -3.970 2.668 -3.379 -3.494 0.905 -4.026 -0.797 1.874 -3.700 -0.165 -2.388 ML 79 77 6 82 6 1 1 57 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 57 113 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 52 109 -9.087 -7.785 -3.582 -4.264 -4.282 -0.310 IL 82 82 5 82 6 1 1 58 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 58 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 78 ] 205 311 c g - - MP 84 83 6 88 6 2 2 57 113 -9.586 -9.525 -0.304 -5.269 -8.581 -2.654 -2.130 -2.689 -2.765 1.223 -2.439 -3.612 2.205 -2.768 -2.318 1.067 -3.344 -0.945 1.960 -2.911 -0.157 -1.854 ML 85 83 6 88 6 1 1 55 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 54 111 -7.047 -5.776 -1.561 -5.754 -0.888 -3.710 0.340 -0.296 -0.180 0.053 D 87 83 6 88 6 0 0 50 106 -9.144 -7.842 -3.639 -4.321 -4.339 -0.297 IL 88 88 5 88 6 1 1 57 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 57 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 79 ] 206 310 c g - - MP 90 89 6 94 4 2 2 56 112 -2.109 -3.343 -0.640 -5.169 -1.121 -1.439 -1.718 1.367 -1.657 -2.437 1.645 -2.056 -1.527 1.203 -2.220 -0.338 1.477 -1.765 0.058 -0.632 ML 91 89 6 94 4 1 1 52 109 -4.152 -1.890 -0.901 -2.853 0.032 -0.793 0.608 -0.190 MR 92 89 6 94 4 1 1 50 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 0 45 101 -6.751 -5.410 -0.356 -2.427 IL 94 94 5 94 4 1 1 58 114 -0.577 -2.000 -3.758 -7.496 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 1 53 109 -0.473 -2.254 -3.842 0.000 0.000 0.000 0.000 [ MATL 80 ] 220 - a - - - ML 96 95 6 98 3 1 1 16 34 -8.784 -0.026 -6.028 0.303 -0.820 0.129 0.145 D 97 95 6 98 3 0 0 15 33 -7.733 -1.489 -0.646 IL 98 98 3 98 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 81 ] 221 - a - - - ML 99 98 3 101 3 1 1 14 33 -8.835 -0.049 -5.014 0.776 -0.658 -0.970 0.194 D 100 98 3 101 3 0 0 14 32 -7.414 -2.409 -0.311 IL 101 101 3 101 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 82 ] 222 - a - - - ML 102 101 3 104 3 1 1 12 31 -8.809 -0.209 -2.917 0.803 -0.546 -1.004 0.100 D 103 101 3 104 3 0 0 12 31 -7.584 -2.409 -0.310 IL 104 104 3 104 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 83 ] 223 - a - - - ML 105 104 3 107 2 1 1 1 1 * 0.000 0.622 0.116 -0.909 -0.243 D 106 104 3 107 2 0 0 0 0 * 0.000 IL 107 107 3 107 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 84 ] - - - - - - E 108 107 3 -1 0 0 0 0 0 [ BEGL 23 ] - - - - - - S 109 66 1 110 4 3 25 147 234 -0.029 -7.447 -6.855 -7.495 [ MATP 24 ] 6 201 g c - - MP 110 109 1 114 6 5 26 147 234 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -2.082 -1.922 -2.240 1.674 -2.720 -3.334 0.767 -2.965 -2.376 2.170 -3.182 1.146 0.735 -2.275 -0.767 -0.885 ML 111 109 1 114 6 2 21 145 232 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 1 114 6 2 20 145 232 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 1 114 6 0 16 140 228 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 3 22 146 234 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 3 22 146 233 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 7 200 C G - - MP 116 115 6 120 6 5 24 145 232 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -4.907 -4.840 -4.660 -0.718 -2.649 -5.141 3.503 -4.127 -4.651 -0.468 -4.985 -2.689 0.975 -4.982 -0.588 -3.446 ML 117 115 6 120 6 2 20 143 230 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 6 2 19 143 230 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 6 120 6 0 15 139 226 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 3 21 144 232 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 3 22 144 231 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 8 199 A U - - MP 122 121 6 126 6 5 23 143 230 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -5.016 -3.913 -4.925 3.678 -5.253 -6.600 0.009 -4.839 -4.817 -0.108 -5.365 -1.295 -1.446 -5.830 -2.853 -3.725 ML 123 121 6 126 6 2 19 141 229 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 2 18 141 228 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 15 137 225 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 2 20 142 230 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 3 20 142 229 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 9 198 U A - - MP 128 127 6 132 6 4 21 141 228 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -5.482 -5.468 -5.100 -1.619 -3.687 -5.463 1.027 -4.511 -5.126 -1.492 -5.392 -3.429 3.630 -5.498 -1.345 -3.019 ML 129 127 6 132 6 2 18 139 227 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 2 17 139 226 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 15 136 224 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 2 19 140 228 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 2 19 140 228 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 10 197 c g - - MP 134 133 6 138 4 3 19 139 226 -7.984 -8.191 -0.082 -4.393 -1.122 -1.859 -0.165 0.954 -1.046 -2.589 2.120 -2.005 -1.886 0.872 -2.334 -0.441 1.166 -2.051 0.240 -1.034 ML 135 133 6 138 4 2 17 138 226 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 4 1 16 137 225 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 137 133 6 138 4 0 14 136 223 -4.568 -4.250 -2.265 -0.520 IL 138 138 5 138 4 2 18 139 226 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 139 139 6 139 3 2 18 139 226 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 11 - A - - - ML 140 139 6 142 3 3 17 137 225 -8.893 -0.011 -7.548 1.277 -1.182 -1.176 -0.528 D 141 139 6 142 3 0 14 135 222 -6.903 -2.416 -0.314 IL 142 142 3 142 3 2 17 138 225 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 12 - A - - - ML 143 142 3 145 3 3 16 136 224 -8.893 -0.011 -7.548 1.204 -1.091 -0.562 -0.862 D 144 142 3 145 3 0 14 134 222 -6.903 -2.416 -0.314 IL 145 145 3 145 3 2 16 137 224 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 13 - G - - - ML 146 145 3 148 3 2 15 135 223 -8.893 -0.011 -7.548 -3.013 -4.306 1.898 -3.328 D 147 145 3 148 3 0 13 134 221 -6.903 -2.416 -0.314 IL 148 148 3 148 3 2 15 136 223 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 14 - A - - - ML 149 148 3 151 3 1 14 134 222 -9.238 -0.680 -1.418 1.925 -4.164 -3.648 -3.871 D 150 148 3 151 3 0 13 134 221 -6.105 -0.483 -1.888 IL 151 151 3 151 3 1 15 136 224 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 196 - a - - MR 152 151 3 154 3 1 14 135 223 -0.906 -1.131 -6.668 0.308 -0.398 -0.055 0.058 D 153 151 3 154 3 0 12 124 206 -9.128 -0.151 -3.358 IR 154 154 3 154 3 1 13 137 225 -0.311 -4.294 -2.804 0.000 0.000 0.000 0.000 [ MATR 34 ] - 172 - a - - MR 155 154 3 157 3 1 13 124 206 -8.708 -0.015 -7.026 0.448 -0.456 -0.445 0.229 D 156 154 3 157 3 0 10 122 204 -9.041 -3.520 -0.135 IR 157 157 3 157 3 1 13 124 206 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 171 - A - - MR 158 157 3 160 3 1 12 123 205 -8.736 -0.030 -5.790 1.059 -1.149 -0.823 -0.152 D 159 157 3 160 3 0 10 122 204 -8.992 -2.464 -0.292 IR 160 160 3 160 3 1 12 123 205 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 170 - a - - MR 161 160 3 163 3 1 11 122 204 -1.847 -1.255 -1.723 0.671 -0.828 -0.345 0.081 D 162 160 3 163 3 0 10 122 204 -6.465 -0.219 -2.948 IR 163 163 3 163 3 1 10 121 203 -3.103 -1.127 -1.232 0.000 0.000 0.000 0.000 [ MATR 37 ] - 168 - a - - MR 164 163 3 166 3 1 11 123 205 -0.918 -1.112 -6.958 0.349 -0.108 -0.582 0.177 D 165 163 3 166 3 0 9 111 190 -9.149 -0.165 -3.235 IR 166 166 3 166 3 1 11 125 207 -0.335 -2.301 -7.938 0.000 0.000 0.000 0.000 [ MATR 38 ] - 144 - u - - MR 167 166 3 169 2 1 9 111 189 -9.468 -0.002 0.209 -0.419 -1.205 0.733 D 168 166 3 169 2 0 8 110 189 -4.531 -0.064 IR 169 169 3 169 2 1 9 111 190 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 39 ] - - - - - - B 170 169 3 171 224 0 8 110 188 [ BEGL 40 ] - - - - - - S 171 170 1 172 4 0 0 81 160 -0.037 -7.447 -6.675 -6.645 [ MATP 41 ] 15 81 G C - - MP 172 171 1 176 4 2 2 81 160 -7.972 -7.617 -0.542 -1.717 -3.925 -2.476 -3.449 1.409 -4.755 -4.408 0.136 -4.408 -4.163 3.194 -4.445 0.047 -0.166 -3.664 -1.943 -1.939 ML 173 171 1 176 4 1 1 81 159 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 174 171 1 176 4 1 1 80 159 -4.835 -3.864 -1.731 -0.749 0.333 -0.279 -0.265 0.116 D 175 171 1 176 4 0 0 79 157 -4.681 -4.363 -2.378 -0.474 IL 176 176 5 176 4 1 1 82 160 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 177 177 6 177 3 1 1 81 160 -1.452 -0.790 -4.152 0.000 0.000 0.000 0.000 [ MATL 42 ] 16 - a - - - ML 178 177 6 180 5 1 1 80 158 -7.035 -0.050 -5.777 -7.558 -8.449 0.421 -0.224 -1.054 0.404 D 179 177 6 180 5 0 0 78 156 -6.948 -0.882 -2.597 -4.416 -2.077 IL 180 180 3 180 5 1 1 80 158 -2.421 -0.491 -4.099 -5.932 -5.205 0.000 0.000 0.000 0.000 [ MATP 43 ] 18 79 g c - - MP 181 180 3 185 6 2 2 79 157 -9.468 -8.566 -0.022 -8.183 -7.434 -8.858 -3.237 -2.544 -3.094 1.892 -3.458 -3.972 1.039 -3.625 -3.229 2.572 -3.615 -0.278 0.906 -3.249 -1.124 -2.282 ML 182 180 3 185 6 1 1 77 156 -7.045 -7.391 -0.631 -1.749 -7.241 -4.770 0.489 -0.310 -0.438 0.073 MR 183 180 3 185 6 1 1 76 155 -7.014 -5.743 -1.652 -5.721 -0.808 -3.935 0.396 -0.484 -0.011 -0.034 D 184 180 3 185 6 0 0 75 153 -10.065 -8.764 -1.089 -5.243 -5.260 -1.077 IL 185 185 5 185 6 1 1 78 157 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 186 186 6 186 5 1 1 78 156 -2.421 -0.491 -5.932 -4.100 -5.206 0.000 0.000 0.000 0.000 [ MATP 44 ] 19 77 G C - - MP 187 186 6 191 6 2 2 77 155 -8.646 -9.516 -0.018 -8.293 -8.099 -8.968 -3.869 -2.658 -3.736 1.556 -4.504 -4.372 0.596 -4.304 -4.096 3.063 -4.395 -0.125 0.226 -3.635 -1.698 -2.571 ML 188 186 6 191 6 1 1 75 153 -6.275 -6.621 -1.274 -1.030 -6.471 -4.001 0.398 -0.475 -0.030 -0.024 MR 189 186 6 191 6 1 1 74 153 -7.075 -5.804 -1.632 -5.782 -0.808 -3.996 0.237 -0.256 -0.376 0.280 D 190 186 6 191 6 0 0 71 149 -9.260 -7.958 -2.251 -4.437 -4.455 -0.530 IL 191 191 5 191 6 1 1 76 155 -2.602 -2.865 -0.744 -4.521 -5.297 -4.957 0.000 0.000 0.000 0.000 IR 192 192 6 192 5 1 1 76 154 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 21 76 g c - - MP 193 192 6 197 6 2 2 75 153 -9.588 -9.528 -0.072 -7.265 -7.244 -4.910 -3.582 -2.918 -3.576 1.197 -3.416 -4.312 1.725 -3.745 -3.716 2.572 -4.151 -0.639 1.204 -3.605 -0.737 -2.504 ML 194 192 6 197 6 1 1 72 151 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 195 192 6 197 6 1 1 72 150 -7.072 -5.801 -1.527 -4.895 -0.913 -3.992 0.415 -0.552 0.063 -0.090 D 196 192 6 197 6 0 0 67 146 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 197 197 5 197 6 1 1 74 153 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 198 198 6 198 5 1 1 74 152 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 22 75 u a - - MP 199 198 6 203 6 2 2 73 152 -9.536 -9.475 -0.042 -7.877 -7.906 -5.849 -2.668 -2.634 -2.805 1.505 -2.444 -3.635 1.774 -2.705 -2.851 1.655 -3.392 -0.539 1.794 -2.932 -0.227 -1.573 ML 200 198 6 203 6 1 1 70 148 -6.362 -6.708 -1.298 -1.117 -6.558 -3.324 0.317 -0.476 -0.009 0.058 MR 201 198 6 203 6 1 1 69 148 -7.078 -5.807 -1.648 -4.606 -0.919 -3.546 0.397 -0.429 -0.283 0.161 D 202 198 6 203 6 0 0 64 143 -9.847 -8.545 -3.289 -5.025 -4.434 -0.292 IL 203 203 5 203 6 1 1 72 151 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 204 204 6 204 5 1 1 72 150 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 23 74 c g - - MP 205 204 6 209 4 2 2 71 150 -1.971 -4.409 -0.884 -2.682 -1.796 -2.149 -2.163 1.107 -2.055 -3.012 1.950 -2.323 -2.143 0.980 -2.785 -0.588 1.632 -2.052 0.513 -0.145 ML 206 204 6 209 4 1 1 66 145 -3.806 -3.727 -0.555 -2.538 0.279 -0.366 -0.291 0.255 MR 207 204 6 209 4 1 1 64 143 -4.877 -3.906 -1.674 -0.771 0.355 -0.466 -0.042 0.037 D 208 204 6 209 4 0 0 61 140 -5.562 -4.589 -1.145 -1.044 IL 209 209 5 209 4 1 1 74 153 -0.811 -1.505 -3.788 -7.525 0.000 0.000 0.000 0.000 IR 210 210 6 210 3 1 1 72 151 -0.338 -2.817 -3.897 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - u - - - ML 211 210 6 213 3 1 1 16 34 -8.495 -0.032 -5.725 0.036 -0.649 -0.293 0.605 D 212 210 6 213 3 0 0 14 33 -8.737 -2.206 -0.357 IL 213 213 3 213 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - a - - - ML 214 213 3 216 3 1 1 14 33 -8.580 -0.029 -5.858 0.595 -0.810 -0.456 0.251 D 215 213 3 216 3 0 0 13 32 -8.524 -1.128 -0.890 IL 216 216 3 216 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 35 - A - - - ML 217 216 3 219 3 1 1 12 31 -8.759 -0.165 -3.238 1.312 -1.299 -1.055 -0.666 D 218 216 3 219 3 0 0 12 31 -7.864 -1.882 -0.465 IL 219 219 3 219 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 36 - a - - - ML 220 219 3 222 2 1 1 1 1 * 0.000 0.737 -0.572 -0.530 -0.046 D 221 219 3 222 2 0 0 0 0 * 0.000 IL 222 222 3 222 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 223 222 3 -1 0 0 0 0 0 [ BEGR 53 ] - - - - - - S 224 170 1 225 5 0 0 58 93 -7.982 -0.021 -7.797 -8.009 -8.901 IL 225 225 2 225 5 1 1 59 94 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 82 143 g c - - MP 226 225 2 230 6 2 2 58 93 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -2.466 -2.331 -2.730 1.831 -2.812 -3.500 1.046 -3.081 -1.539 1.983 -3.331 1.003 1.076 -2.802 -0.799 -1.882 ML 227 225 2 230 6 1 1 57 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 228 225 2 230 6 1 1 56 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 229 225 2 230 6 0 0 54 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 230 230 5 230 6 1 1 58 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 231 231 6 231 5 1 1 57 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 83 142 c g - - MP 232 231 6 236 6 2 2 56 91 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -3.884 -3.290 -3.892 0.516 -3.414 -4.691 2.628 -3.838 -3.906 2.218 -4.376 -0.284 0.706 -4.011 -0.957 -2.715 ML 233 231 6 236 6 1 1 55 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 234 231 6 236 6 1 1 55 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 235 231 6 236 6 0 0 52 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 236 236 5 236 6 1 1 56 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 237 237 6 237 5 1 1 55 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 84 141 C G - - MP 238 237 6 242 4 2 2 54 89 -7.984 -8.191 -0.026 -6.605 -7.031 -7.166 -6.258 -3.326 -3.831 -6.345 3.914 -5.818 -6.568 -3.225 -6.363 -5.305 -1.539 -6.955 -2.619 -5.365 ML 239 237 6 242 4 1 1 54 88 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 240 237 6 242 4 1 1 53 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 241 237 6 242 4 0 0 52 87 -4.568 -4.250 -2.265 -0.520 IL 242 242 5 242 4 1 1 55 89 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 243 243 6 243 3 1 1 54 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 85 - A - - - ML 244 243 6 246 3 1 1 52 87 -6.529 -0.023 -7.600 1.929 -4.255 -3.734 -3.966 D 245 243 6 246 3 0 0 50 85 -6.174 -1.687 -0.566 IL 246 246 3 246 3 1 1 53 88 -1.499 -0.757 -4.199 0.000 0.000 0.000 0.000 [ MATL 58 ] 87 - A - - - ML 247 246 3 249 3 1 1 51 86 -9.289 -0.010 -7.607 1.929 -4.255 -3.734 -3.966 D 248 246 3 249 3 0 0 50 85 -5.620 -0.734 -1.403 IL 249 249 3 249 3 1 1 52 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 140 - U - - MR 250 249 3 252 5 1 1 50 85 -7.982 -0.021 -7.797 -8.009 -8.901 -2.096 -2.082 -2.105 1.721 D 251 249 3 252 5 0 0 49 83 -5.352 -0.707 -2.978 -4.409 -2.404 IR 252 252 3 252 5 1 1 50 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 88 139 C G - - MP 253 252 3 257 6 2 2 49 84 -9.594 -9.533 -0.015 -8.310 -8.589 -8.984 -7.059 -7.191 -6.282 -3.351 -3.768 -6.367 3.916 -5.852 -6.600 -3.248 -6.384 -5.327 -1.570 -6.986 -2.653 -5.397 ML 254 252 3 257 6 1 1 47 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 255 252 3 257 6 1 1 47 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 256 252 3 257 6 0 0 44 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 257 257 5 257 6 1 1 49 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 258 258 6 258 5 1 1 48 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 89 138 C G - - MP 259 258 6 263 6 2 2 47 82 -9.061 -9.533 -0.016 -8.310 -8.589 -8.984 -6.694 -6.782 -5.977 -2.969 -4.389 -6.108 3.895 -5.447 -6.203 -2.908 -6.121 -4.875 -1.207 -6.622 -2.257 -5.006 ML 260 258 6 263 6 1 1 46 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 261 258 6 263 6 1 1 45 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 262 258 6 263 6 0 0 43 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 263 263 5 263 6 1 1 47 81 -2.591 -2.854 -0.752 -4.509 -5.285 -4.945 0.000 0.000 0.000 0.000 IR 264 264 6 264 5 1 1 46 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 91 137 u a - - MP 265 264 6 269 4 2 2 45 80 -6.396 -3.481 -0.189 -5.538 -3.320 -1.984 -3.384 0.596 -2.737 -4.175 1.242 -3.472 -3.446 2.152 -3.940 -0.906 2.423 -3.486 -0.749 -2.355 ML 266 264 6 269 4 1 1 44 79 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 267 264 6 269 4 1 1 44 79 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 268 264 6 269 4 0 0 42 77 -12.737 -14.007 -2.036 -0.404 IL 269 269 5 269 4 1 1 44 79 -2.666 -3.407 -0.724 -2.809 0.000 0.000 0.000 0.000 IR 270 270 6 270 3 1 1 45 79 -1.738 -0.577 -5.071 0.000 0.000 0.000 0.000 [ MATR 63 ] - 134 - A - - MR 271 270 6 273 5 1 1 43 78 -7.982 -0.023 -7.797 -8.009 -8.155 1.810 -3.037 -2.090 -2.878 D 272 270 6 273 5 0 0 41 76 -5.352 -0.707 -2.978 -4.409 -2.404 IR 273 273 3 273 5 1 1 43 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 94 133 g c - - MP 274 273 3 278 6 2 2 42 77 -9.592 -9.532 -0.022 -7.146 -8.588 -8.410 -2.161 0.129 -3.240 1.388 -3.222 -3.942 0.379 -3.751 -2.921 2.870 -3.893 0.150 0.159 -3.218 -1.434 -2.328 ML 275 273 3 278 6 1 1 40 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 276 273 3 278 6 1 1 40 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 277 273 3 278 6 0 0 37 72 -9.079 -7.777 -3.574 -4.256 -4.274 -0.312 IL 278 278 5 278 6 1 1 41 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 279 279 6 279 5 1 1 41 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 95 132 g c - - MP 280 279 6 284 6 2 2 40 75 -9.585 -9.525 -0.030 -6.488 -7.639 -8.976 -2.652 -2.741 -3.060 0.821 -2.832 -3.865 2.202 -3.231 -2.807 2.232 -3.098 -0.539 0.995 -3.159 -0.144 -2.105 ML 281 279 6 284 6 1 1 38 73 -6.351 -6.697 -1.412 -0.966 -6.547 -3.650 0.503 -0.483 -0.258 0.045 MR 282 279 6 284 6 1 1 38 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 283 279 6 284 6 0 0 35 70 -9.111 -7.809 -3.606 -4.288 -4.306 -0.304 IL 284 284 5 284 6 1 1 39 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 285 285 6 285 5 1 1 39 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 96 131 c g - - MP 286 285 6 290 4 2 2 38 73 -3.353 -3.258 -0.363 -5.656 -0.837 -2.067 -2.187 1.416 -2.148 -2.973 2.163 -2.537 -2.238 1.182 -2.877 -0.681 1.378 -2.395 -0.155 -1.397 ML 287 285 6 290 4 1 1 36 71 -3.957 -4.139 -0.611 -2.158 0.343 -0.072 -0.493 0.097 MR 288 285 6 290 4 1 1 37 71 -3.703 -3.901 -1.769 -0.829 0.372 -0.523 0.079 -0.068 D 289 285 6 290 4 0 0 34 69 -4.662 -3.887 -2.359 -0.519 IL 290 290 5 290 4 1 1 40 75 -0.777 -1.897 -2.851 -6.746 0.000 0.000 0.000 0.000 IR 291 291 6 291 3 1 1 34 67 -0.823 -1.386 -4.264 0.000 0.000 0.000 0.000 [ MATL 67 ] 103 - u - - - ML 292 291 6 294 3 1 1 18 37 -8.871 -0.070 -4.472 0.436 -0.447 -0.890 0.458 D 293 291 6 294 3 0 0 17 36 -7.121 -1.725 -0.535 IL 294 294 3 294 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 104 - a - - - ML 295 294 3 297 3 1 1 17 35 -8.836 -0.014 -7.025 0.394 -0.440 -0.080 0.005 D 296 294 3 297 3 0 0 16 35 -7.402 -1.972 -0.436 IL 297 297 3 297 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 105 - a - - - ML 298 297 3 300 3 1 1 15 34 -8.857 -0.031 -5.700 0.250 0.146 -0.347 -0.123 D 299 297 3 300 3 0 0 15 33 -7.238 -2.277 -0.346 IL 300 300 3 300 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 106 - c - - - ML 301 300 3 303 3 1 1 14 33 -8.848 -0.132 -3.553 -0.209 0.478 -0.682 0.162 D 302 300 3 303 3 0 0 14 32 -7.316 -2.301 -0.339 IL 303 303 3 303 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 107 - c - - - ML 304 303 3 306 3 1 1 13 31 -8.741 -0.211 -2.904 -0.005 0.363 -0.801 0.193 D 305 303 3 306 3 0 0 12 30 -7.952 -3.465 -0.143 IL 306 306 3 306 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 108 - a - - - ML 307 306 3 309 2 1 1 1 1 * 0.000 0.619 -0.144 -0.387 -0.331 D 308 306 3 309 2 0 0 0 0 * 0.000 IL 309 309 3 309 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 310 309 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SAM-I-IV-variant ACC RF01725 DESC SAM-I/IV variant riboswitch LENG 99 MAXL 212 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Oct 23 23:23:03 2022 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED NSEQ 417 EFFN 25.658455 CKSUM 4172824510 STATS LOCAL MSV -9.1636 0.71843 STATS LOCAL VITERBI -10.3038 0.71843 STATS LOCAL FORWARD -3.8082 0.71843 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.20504 1.46994 1.36367 1.53869 1.38629 1.38629 1.38629 1.38629 0.00848 5.46734 5.46734 1.46634 0.26236 0.00000 * 1 0.90385 1.97322 1.71221 1.28909 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.00848 5.46734 5.46734 1.46634 0.26236 1.09861 0.40547 2 1.01417 1.62091 2.02088 1.18079 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.00848 5.46734 5.46734 1.46634 0.26236 1.09861 0.40547 3 1.14063 1.61182 1.64063 1.24827 3 a - - : 1.38629 1.38629 1.38629 1.38629 0.00848 5.46734 5.46734 1.46634 0.26236 1.09861 0.40547 4 1.01869 1.46226 1.79207 1.42460 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.00846 5.46955 5.46955 1.46634 0.26236 1.09861 0.40547 5 0.81617 2.37277 2.24211 1.02605 5 a - - : 1.38629 1.38629 1.38629 1.38629 0.00846 5.46955 5.46955 1.46634 0.26236 1.09861 0.40547 6 1.27723 3.05972 0.59702 2.08877 6 G - - ( 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 7 4.19105 0.15517 3.86360 2.22930 7 C - - ( 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 8 0.09831 2.93331 3.45267 4.73837 8 A - - ( 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 9 5.22575 2.57557 5.15602 0.09130 9 U - - ( 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 10 1.51336 0.79230 1.99555 1.65502 10 c - - ( 1.38629 1.38629 1.38629 1.38629 0.05154 5.52533 3.07379 1.46634 0.26236 1.09861 0.40547 11 0.32398 2.62093 2.58617 2.05034 11 A - - , 1.38629 1.38629 1.38629 1.38629 0.00836 5.48215 5.48215 1.46634 0.26236 2.61053 0.07634 12 0.37402 2.42488 1.82985 2.76287 12 A - - , 1.38629 1.38629 1.38629 1.38629 0.00836 5.48215 5.48215 1.46634 0.26236 2.61053 0.07634 13 5.03314 6.10514 0.02308 4.26407 13 G - - , 1.38629 1.38629 1.38629 1.38629 0.00836 5.48215 5.48215 1.46634 0.26236 2.61053 0.07634 14 0.00879 6.11223 5.66208 5.78792 14 A - - , 1.38629 1.38629 1.38629 1.38629 0.01878 5.48215 4.23771 1.46634 0.26236 0.15899 1.91738 15 1.82667 3.18975 0.29962 2.86874 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.43163 5.51544 1.05979 1.46634 0.26236 1.69946 0.20185 16 0.99950 1.52972 2.59444 1.07689 16 a - - - 1.38629 1.38629 1.38629 1.38629 0.01563 4.66846 5.09612 1.01675 0.44906 0.32038 1.29416 17 1.09315 2.26833 0.83840 2.04828 18 g - - < 1.38629 1.38629 1.38629 1.38629 0.01505 5.42995 4.55112 1.46634 0.26236 0.26759 1.44911 18 1.61408 2.53859 0.43184 2.62234 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.01289 5.02144 5.08063 0.97101 0.47594 0.51457 0.91070 19 1.97779 1.50401 0.75237 1.78295 21 g - - < 1.38629 1.38629 1.38629 1.38629 0.08523 5.51759 2.55514 1.46634 0.26236 0.51977 0.90302 20 1.45975 1.57303 1.41691 1.14624 22 u - - < 1.38629 1.38629 1.38629 1.38629 0.05133 5.44942 3.08493 1.46634 0.26236 1.59402 0.22704 21 1.89919 1.23664 1.94809 0.87370 23 u - - < 1.38629 1.38629 1.38629 1.38629 0.74777 1.19730 1.49358 0.82466 0.57694 0.39568 1.11847 22 1.47034 2.09232 1.51448 0.85137 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09500 5.26843 2.45949 1.46634 0.26236 2.37018 0.09812 23 0.85472 2.30869 1.74444 1.20243 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02495 5.21010 3.95404 1.46634 0.26236 0.71944 0.66753 24 0.28969 2.82353 2.43572 2.25784 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06226 5.36649 2.88792 1.46634 0.26236 0.14304 2.01530 25 0.73260 1.87936 1.82147 1.58540 36 a - - _ 1.38629 1.38629 1.38629 1.38629 0.56946 1.09638 2.30168 1.78607 0.18346 0.20451 1.68764 26 1.44671 2.08812 0.93314 1.39667 74 g - - > 1.38629 1.38629 1.38629 1.38629 0.02868 5.42533 3.73507 1.46634 0.26236 0.91676 0.51052 27 1.29662 1.55501 1.43766 1.28059 75 u - - > 1.38629 1.38629 1.38629 1.38629 0.00864 5.44852 5.44852 1.46634 0.26236 0.09737 2.37748 28 1.94369 0.79206 1.39935 1.85050 76 c - - > 1.38629 1.38629 1.38629 1.38629 0.02403 5.52533 3.92437 1.46634 0.26236 1.09861 0.40547 29 2.82901 0.48494 2.43390 1.43760 77 C - - > 1.38629 1.38629 1.38629 1.38629 0.18525 5.05904 1.81550 0.99731 0.46025 1.93986 0.15516 30 2.19922 0.85930 2.23247 1.02613 79 c - - > 1.38629 1.38629 1.38629 1.38629 0.01202 4.94233 5.33662 1.04597 0.43286 0.09007 2.45184 31 3.38153 0.36205 2.97832 1.51923 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.00806 5.51743 5.51743 1.46634 0.26236 0.51404 0.91149 32 1.15835 2.53873 0.74200 2.03356 82 g - - < 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 33 3.42279 0.59441 0.93335 3.80510 83 C - - < 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 34 6.64298 0.00493 6.73712 6.01841 84 C - - < 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 35 0.00837 6.16568 5.71160 5.83476 85 A - - - 1.38629 1.38629 1.38629 1.38629 0.01882 4.22251 5.52533 0.47612 0.97071 1.09861 0.40547 36 0.00837 6.16568 5.71160 5.83476 87 A - - - 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 37 6.80481 0.00443 6.85622 6.09185 88 C - - < 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 38 6.35012 0.00840 6.37227 5.31620 89 C - - < 1.38629 1.38629 1.38629 1.38629 0.00921 5.26185 5.52533 1.16896 0.37206 1.09861 0.40547 39 3.18310 3.21749 1.05914 0.55908 91 U - - < 1.38629 1.38629 1.38629 1.38629 0.01535 4.48731 5.52533 0.84909 0.55827 1.09861 0.40547 40 1.20423 3.18416 0.48389 3.16334 94 G - - < 1.38629 1.38629 1.38629 1.38629 0.01201 5.52533 4.83377 1.46634 0.26236 1.09861 0.40547 41 2.53458 0.98258 0.86603 2.07354 95 g - - < 1.38629 1.38629 1.38629 1.38629 0.01053 5.52135 5.03951 1.46634 0.26236 1.38550 0.28795 42 1.32734 0.97269 1.83552 1.62342 96 c - - < 1.38629 1.38629 1.38629 1.38629 0.14829 2.22430 3.51750 1.14065 0.38509 1.52950 0.24417 43 1.00524 1.78855 2.28039 1.00897 103 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08114 5.49287 2.60619 1.46634 0.26236 1.16925 0.37193 44 1.06636 1.71069 1.34049 1.54514 104 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01146 5.43128 4.95929 1.46634 0.26236 1.48707 0.25623 45 1.22457 1.09566 1.59467 1.77890 105 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02606 5.44936 3.84330 1.46634 0.26236 1.95018 0.15344 46 1.77181 0.83945 1.91012 1.38644 106 c - - _ 1.38629 1.38629 1.38629 1.38629 0.11193 5.44096 2.28715 1.46634 0.26236 1.95475 0.15268 47 1.49803 0.93363 2.08844 1.34929 107 c - - _ 1.38629 1.38629 1.38629 1.38629 0.14706 5.34967 2.02491 1.46634 0.26236 1.16540 0.37367 48 0.83985 1.33380 1.66638 2.15570 108 a - - _ 1.38629 1.38629 1.38629 1.38629 0.34401 1.26118 4.85869 0.94231 0.49385 0.15370 1.94860 49 1.57490 1.92368 0.88701 1.44810 131 g - - > 1.38629 1.38629 1.38629 1.38629 0.01018 5.49810 5.11046 1.46634 0.26236 0.63243 0.75780 50 2.51650 0.95334 0.84188 2.27393 132 g - - > 1.38629 1.38629 1.38629 1.38629 0.00810 5.51315 5.51315 1.46634 0.26236 0.52691 0.89264 51 2.82675 0.39216 3.12407 1.50860 133 C - - > 1.38629 1.38629 1.38629 1.38629 0.00802 5.52344 5.52344 1.46634 0.26236 0.85752 0.55202 52 0.06431 4.41799 3.18571 4.72389 134 A - - - 1.38629 1.38629 1.38629 1.38629 0.13089 2.13116 5.52533 0.45172 1.01207 1.09861 0.40547 53 0.56386 1.02206 3.17225 3.53250 137 A - - > 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 54 5.45244 6.52340 0.00745 6.39711 138 G - - > 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 55 5.82411 7.02763 0.00468 7.10247 139 G - - > 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 56 4.16107 4.05536 3.03307 0.08456 140 U - - - 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 57 5.76139 6.86570 0.00524 6.86777 141 G - - > 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 58 4.04184 1.07240 0.58671 2.47577 142 G - - > 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 59 1.89301 1.41108 2.42121 0.66031 143 U - - > 1.38629 1.38629 1.38629 1.38629 0.01340 5.52533 4.67534 1.46634 0.26236 1.09861 0.40547 60 1.21335 1.76860 2.71662 0.76329 144 u - - , 1.38629 1.38629 1.38629 1.38629 1.20896 0.84166 1.30749 1.79950 0.18078 1.46779 0.26193 61 1.09932 1.35755 1.88327 1.35665 168 a - - , 1.38629 1.38629 1.38629 1.38629 0.85192 2.33795 0.74049 0.10955 2.26563 0.04353 3.15608 62 0.78396 2.31104 1.62725 1.39522 170 a - - , 1.38629 1.38629 1.38629 1.38629 0.11540 5.09762 2.27419 1.46634 0.26236 3.32193 0.03675 63 0.42908 2.95291 2.27294 1.64148 171 A - - , 1.38629 1.38629 1.38629 1.38629 0.01604 5.01102 4.68318 1.46634 0.26236 0.01943 3.95040 64 0.99436 1.78713 1.72703 1.25600 172 a - - , 1.38629 1.38629 1.38629 1.38629 1.84259 0.93462 0.80105 1.81256 0.17821 0.89239 0.52708 65 1.16153 1.66274 1.30715 1.48376 196 a - - , 1.38629 1.38629 1.38629 1.38629 0.01444 4.93802 4.93802 1.46634 0.26236 0.01763 4.04722 66 1.74782 2.24237 0.54434 1.97028 197 G - - ) 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 67 0.10415 5.28924 2.50603 4.40062 198 A - - ) 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 68 4.93939 3.73718 2.89893 0.08999 199 U - - ) 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 69 2.39407 3.93993 0.13753 4.02924 200 G - - ) 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 70 2.53284 1.13161 2.72631 0.63000 201 U - - ) 1.38629 1.38629 1.38629 1.38629 0.00800 5.52533 5.52533 1.46634 0.26236 1.09861 0.40547 71 4.47030 6.10714 0.02274 4.73190 202 G - - - 1.38629 1.38629 1.38629 1.38629 0.01037 5.52533 5.06218 1.46634 0.26236 1.09861 0.40547 72 2.36894 1.83229 0.38225 2.74811 203 G - - < 1.38629 1.38629 1.38629 1.38629 0.00802 5.52298 5.52298 1.46634 0.26236 1.27790 0.32659 73 2.54201 0.65699 2.15415 1.24869 204 C - - < 1.38629 1.38629 1.38629 1.38629 0.01724 5.52298 4.33515 1.46634 0.26236 1.27790 0.32659 74 1.75077 1.06545 1.97947 1.06814 205 c - - < 1.38629 1.38629 1.38629 1.38629 0.41308 5.51383 1.09553 1.46634 0.26236 1.09968 0.40493 75 1.42645 1.45455 1.39511 1.27823 206 u - - < 1.38629 1.38629 1.38629 1.38629 0.32611 1.37954 3.62774 1.28285 0.32469 0.08186 2.54342 76 1.16152 2.25136 1.15137 1.32603 220 g - - _ 1.38629 1.38629 1.38629 1.38629 0.09824 5.49183 2.41410 1.46634 0.26236 0.45633 1.00404 77 0.70037 2.02764 2.40000 1.26857 221 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04141 5.42992 3.31920 1.46634 0.26236 2.07670 0.13392 78 0.67716 1.86823 2.45255 1.38042 222 A - - _ 1.38629 1.38629 1.38629 1.38629 0.16819 5.40769 1.89497 1.46634 0.26236 0.13641 2.05952 79 0.83796 1.10928 2.31770 1.97247 223 a - - _ 1.38629 1.38629 1.38629 1.38629 1.27631 1.04834 0.99313 1.44277 0.26955 0.18372 1.78479 80 1.39350 1.61121 1.26517 1.30949 310 g - - > 1.38629 1.38629 1.38629 1.38629 0.01558 5.12090 4.65775 1.46634 0.26236 0.03418 3.39314 81 1.12690 2.13497 0.97790 1.70586 311 g - - > 1.38629 1.38629 1.38629 1.38629 0.00805 5.51936 5.51936 1.46634 0.26236 0.85795 0.55170 82 1.39510 2.42452 0.59206 2.20286 312 G - - > 1.38629 1.38629 1.38629 1.38629 0.00802 5.52298 5.52298 1.46634 0.26236 1.27790 0.32659 83 3.00331 0.41707 1.76410 2.11974 313 C - - > 1.38629 1.38629 1.38629 1.38629 0.00802 5.52298 5.52298 1.46634 0.26236 1.27790 0.32659 84 0.06201 3.17155 4.78967 4.61784 314 A - - : 1.38629 1.38629 1.38629 1.38629 0.00802 5.52298 5.52298 1.46634 0.26236 1.27790 0.32659 85 0.00839 6.16287 5.70899 5.83230 315 A - - : 1.38629 1.38629 1.38629 1.38629 0.44182 1.42365 2.15159 0.11357 2.23158 1.27790 0.32659 86 0.90580 1.30688 2.28582 1.49866 319 a - - : 1.38629 1.38629 1.38629 1.38629 0.02825 5.39817 3.75787 1.46634 0.26236 0.08565 2.50002 87 1.02461 1.26302 2.12488 1.43205 320 a - - : 1.38629 1.38629 1.38629 1.38629 0.01358 5.50043 4.66638 1.46634 0.26236 0.40685 1.09585 88 0.60806 2.38988 2.25621 1.35014 321 A - - : 1.38629 1.38629 1.38629 1.38629 0.00847 5.46825 5.46825 1.46634 0.26236 0.75349 0.63624 89 0.42648 2.53862 2.09754 1.92785 322 A - - : 1.38629 1.38629 1.38629 1.38629 0.00843 5.47373 5.47373 1.46634 0.26236 0.81474 0.58475 90 0.74106 2.44908 1.63440 1.41902 323 a - - : 1.38629 1.38629 1.38629 1.38629 0.01008 5.47620 5.14177 1.46634 0.26236 1.09861 0.40547 91 1.38387 1.74329 1.12781 1.38348 324 g - - : 1.38629 1.38629 1.38629 1.38629 0.00842 5.47454 5.47454 1.46634 0.26236 0.88850 0.52979 92 1.77337 2.10949 0.77397 1.39529 325 g - - : 1.38629 1.38629 1.38629 1.38629 0.00843 5.47384 5.47384 1.46634 0.26236 1.09861 0.40547 93 1.08423 1.47918 1.39013 1.68756 326 a - - : 1.38629 1.38629 1.38629 1.38629 0.01102 5.46513 5.00198 1.46634 0.26236 1.09861 0.40547 94 1.74622 1.55152 0.88542 1.60394 327 g - - : 1.38629 1.38629 1.38629 1.38629 0.00852 5.46263 5.46263 1.46634 0.26236 1.27790 0.32659 95 1.65513 1.41376 1.79216 0.91853 328 u - - : 1.38629 1.38629 1.38629 1.38629 0.01023 5.45475 5.13254 1.46634 0.26236 0.81474 0.58475 96 1.41363 1.13810 1.68719 1.38121 329 c - - : 1.38629 1.38629 1.38629 1.38629 0.00867 5.44571 5.44571 1.46634 0.26236 1.21793 0.35075 97 0.93710 1.56121 1.90507 1.38813 330 a - - : 1.38629 1.38629 1.38629 1.38629 0.00913 5.39349 5.39349 1.46634 0.26236 0.89572 0.52478 98 1.02110 1.42010 2.15405 1.26549 331 a - - : 1.38629 1.38629 1.38629 1.38629 0.01019 5.28492 5.28492 1.46634 0.26236 1.09861 0.40547 99 1.03935 1.58827 1.49136 1.52799 332 a - - : 1.38629 1.38629 1.38629 1.38629 1.76080 0.18863 * 0.02063 3.89123 0.00000 * //